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FFCP PHASE1:Mm9::chr5:117041867..117041874,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68955
|EntrezGene=68955
|HGNC=
|HGNC=
|MCL_coexpression_id=1137
|TSSclassifier=NA
|UniProt=Q8BKA3
|UniProt=Q8BKA3
|association_with_transcript=-41bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end
|association_with_transcript=-41bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end
|cluster_id=chr5:117041867..117041874,-
|description=CAGE_peak_3_at_Srrm4_5end
|description=CAGE_peak_3_at_Srrm4_5end
|id=chr5:117041867..117041874,-
|id=chr5:117041867..117041874,-
|ontology_enrichment_celltype=CL:0000540!1.90e-22!33;CL:0000047!1.90e-22!33;CL:0000031!1.90e-22!33;CL:0000404!1.90e-22!33;CL:0000393!8.16e-17!39;CL:0000211!8.16e-17!39;CL:0000117!1.31e-16!23;CL:0000337!1.31e-16!23;CL:0000221!1.57e-16!44;CL:0000133!1.57e-16!44;CL:0002319!2.65e-16!43;CL:0000055!4.30e-12!50
|ontology_enrichment_celltype=CL:0000540!1.90e-22!33;CL:0000047!1.90e-22!33;CL:0000031!1.90e-22!33;CL:0000404!1.90e-22!33;CL:0000393!8.16e-17!39;CL:0000211!8.16e-17!39;CL:0000117!1.31e-16!23;CL:0000337!1.31e-16!23;CL:0000221!1.57e-16!44;CL:0000133!1.57e-16!44;CL:0002319!2.65e-16!43;CL:0000055!4.30e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,9.40e-28,33;CL:0000047,9.40e-28,33;CL:0000031,9.40e-28,33;CL:0000404,9.40e-28,33;CL:0000117,2.75e-22,23;CL:0000337,2.75e-22,23;CL:0000393,5.64e-22,39;CL:0000211,5.64e-22,39;CL:0002319,4.88e-19,43;CL:0000221,2.17e-18,44;CL:0000133,2.17e-18,44;CL:0002609,3.47e-09,6;CL:0002321,2.78e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.48e-37!102;UBERON:0000924!1.48e-37!102;UBERON:0006601!1.48e-37!102;UBERON:0001017!4.75e-37!73;UBERON:0005743!4.75e-37!73;UBERON:0002346!7.68e-37!71;UBERON:0003075!7.68e-37!71;UBERON:0007284!7.68e-37!71;UBERON:0000073!2.76e-36!75;UBERON:0001016!2.76e-36!75;UBERON:0000033!9.90e-33!63;UBERON:0003056!1.35e-28!49;UBERON:0001049!2.80e-27!52;UBERON:0005068!2.80e-27!52;UBERON:0006241!2.80e-27!52;UBERON:0007135!2.80e-27!52;UBERON:0000955!1.07e-26!50;UBERON:0006238!1.07e-26!50;UBERON:0002616!8.78e-26!49;UBERON:0003080!4.81e-22!40;UBERON:0002780!1.86e-21!39;UBERON:0001890!1.86e-21!39;UBERON:0006240!1.86e-21!39;UBERON:0002020!9.82e-19!34;UBERON:0007811!9.50e-18!86;UBERON:0002791!2.88e-16!29;UBERON:0003528!2.88e-16!29;UBERON:0001893!2.88e-16!29;UBERON:0000153!2.07e-14!94;UBERON:0000956!2.48e-11!21;UBERON:0001869!2.48e-11!21;UBERON:0000203!2.48e-11!21;UBERON:0002619!3.75e-08!17;UBERON:0000970!3.04e-07!9;UBERON:0000019!3.04e-07!9;UBERON:0000047!3.04e-07!9;UBERON:0004088!3.04e-07!9;UBERON:0002104!3.04e-07!9;UBERON:0001456!3.04e-07!9;UBERON:0003072!3.04e-07!9;UBERON:0003071!3.04e-07!9;UBERON:0004128!3.04e-07!9;UBERON:0000020!4.89e-07!12;UBERON:0001032!4.89e-07!12;UBERON:0004456!4.89e-07!12
|ontology_enrichment_uberon=UBERON:0004121!1.48e-37!102;UBERON:0000924!1.48e-37!102;UBERON:0006601!1.48e-37!102;UBERON:0001017!4.75e-37!73;UBERON:0005743!4.75e-37!73;UBERON:0002346!7.68e-37!71;UBERON:0003075!7.68e-37!71;UBERON:0007284!7.68e-37!71;UBERON:0000073!2.76e-36!75;UBERON:0001016!2.76e-36!75;UBERON:0000033!9.90e-33!63;UBERON:0003056!1.35e-28!49;UBERON:0001049!2.80e-27!52;UBERON:0005068!2.80e-27!52;UBERON:0006241!2.80e-27!52;UBERON:0007135!2.80e-27!52;UBERON:0000955!1.07e-26!50;UBERON:0006238!1.07e-26!50;UBERON:0002616!8.78e-26!49;UBERON:0003080!4.81e-22!40;UBERON:0002780!1.86e-21!39;UBERON:0001890!1.86e-21!39;UBERON:0006240!1.86e-21!39;UBERON:0002020!9.82e-19!34;UBERON:0007811!9.50e-18!86;UBERON:0002791!2.88e-16!29;UBERON:0003528!2.88e-16!29;UBERON:0001893!2.88e-16!29;UBERON:0000153!2.07e-14!94;UBERON:0000956!2.48e-11!21;UBERON:0001869!2.48e-11!21;UBERON:0000203!2.48e-11!21;UBERON:0002619!3.75e-08!17;UBERON:0000970!3.04e-07!9;UBERON:0000019!3.04e-07!9;UBERON:0000047!3.04e-07!9;UBERON:0004088!3.04e-07!9;UBERON:0002104!3.04e-07!9;UBERON:0001456!3.04e-07!9;UBERON:0003072!3.04e-07!9;UBERON:0003071!3.04e-07!9;UBERON:0004128!3.04e-07!9;UBERON:0000020!4.89e-07!12;UBERON:0001032!4.89e-07!12;UBERON:0004456!4.89e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.03e-44,73;UBERON:0002346,2.25e-42,64;UBERON:0003075,2.25e-42,64;UBERON:0007284,2.25e-42,64;UBERON:0001016,2.94e-42,75;UBERON:0004121,5.68e-42,95;UBERON:0000924,5.68e-42,95;UBERON:0006601,5.68e-42,95;UBERON:0010371,4.95e-37,73;UBERON:0003056,7.34e-35,49;UBERON:0000073,2.17e-34,54;UBERON:0001049,1.33e-32,52;UBERON:0005068,1.33e-32,52;UBERON:0006241,1.33e-32,52;UBERON:0007135,1.33e-32,52;UBERON:0000955,3.49e-30,47;UBERON:0006238,3.49e-30,47;UBERON:0002616,6.43e-29,46;UBERON:0003080,2.51e-28,40;UBERON:0002780,1.80e-27,39;UBERON:0001890,1.80e-27,39;UBERON:0006240,1.80e-27,39;UBERON:0010314,4.38e-26,92;UBERON:0002020,5.87e-25,34;UBERON:0003528,1.23e-22,29;UBERON:0002791,1.23e-22,29;UBERON:0001893,1.23e-22,29;UBERON:0000956,6.66e-17,21;UBERON:0001869,6.66e-17,21;UBERON:0000203,6.66e-17,21;UBERON:0002619,3.90e-12,17;UBERON:0002021,8.33e-09,10;UBERON:0000411,8.33e-09,10;UBERON:0001950,8.33e-09,10;UBERON:0000025,3.44e-08,114;UBERON:0004111,1.38e-07,122;UBERON:0000970,5.18e-07,9;UBERON:0000019,5.18e-07,9;UBERON:0000047,5.18e-07,9;UBERON:0010312,5.18e-07,9;UBERON:0004088,5.18e-07,9;UBERON:0002104,5.18e-07,9;UBERON:0001456,5.18e-07,9;UBERON:0003072,5.18e-07,9;UBERON:0004128,5.18e-07,9;UBERON:0003071,5.18e-07,9;UBERON:0002420,7.20e-07,8;UBERON:0007245,7.20e-07,8;UBERON:0010009,7.20e-07,8;UBERON:0010011,7.20e-07,8;UBERON:0000454,7.20e-07,8;UBERON:0000483,8.22e-07,174
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,8.8136170462206,9.58542162155004,8.62332341540666,1.99955689082663,1.10434270475807,3.55223317723367,4.69642807989358,6.43453150627015,1.10115880999389,3.19218345212969,2.30409799884365,4.2203612073662,2.74462930807229,4.68822033501084,1.95428099300967,1.68828783009504,2.13917546887534,0.589257170947335,2.56269025438385,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,5.85561594023094,9.21565509979202,0,0,0,0,1.9472783122627,0.915001205637253,2.63874139437015,2.60736480288415,2.30143911597297,2.49345653471472,1.78465389374533,0.101839363850316,0,0,1.26265113531884,0.910843100738926,0.689706313300419,2.88099407688559,4.52114453507145,5.51095643125756,7.55870949680614,10.2134879770104,6.98499100995342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,3.70456604565424,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.40654023910644,0,0,1.26203287766503,2.34263246577983,2.36965737506079,0.955875191810208,1.78238939265915,0.566153061577665,6.8817819284732,4.9683495844923,1.97643888973262,5.14114106274891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.540183282093931,1.29358683782755,1.50035924522115,2.12808280370728,1.60531935841864,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76195141904306,1.71868654031819,2.92150409984269,2.05524755931193,1.5107877947794,3.37511250115903,3.15224842256954,3.62513927187364,3.62432218226274,1.3492355185943,2.79317411380722,1.87806966329548,1.21553358534147,0.838452650511929,0.919217542250071,0.888986911206461,0.206035057238894,1.28367683836726,0,0,0.754505365544305,0.842773567228942,0.768301828858431,1.14870937911227,1.42888107384922,0.927074607558844,1.35036454324594,0.412085900803307,0.883193520806384,1.02860775715625,1.06485483695602,0.238436189947321,1.0174249164263,1.31753132581463,0.846146078916765,0.914639864363863,0.789209134313529,0.271608227691724,0.561142271657738,1.06771516311757,0.689531376628944,0,0.464810523557898,0.385813221962283,2.24829520144151,0.467863216890817,0.859484216193193,0,0,0
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,8.8136170462206,9.58542162155004,8.62332341540666,1.99955689082663,1.10434270475807,3.55223317723367,4.69642807989358,6.43453150627015,1.10115880999389,3.19218345212969,2.30409799884365,4.2203612073662,2.74462930807229,4.68822033501084,1.95428099300967,1.68828783009504,2.13917546887534,0.589257170947335,2.56269025438385,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,5.85561594023094,9.21565509979202,0,0,0,0,1.9472783122627,0.915001205637253,2.63874139437015,2.60736480288415,2.30143911597297,2.49345653471472,1.78465389374533,0.101839363850316,0,0,1.26265113531884,0.910843100738926,0.689706313300419,2.88099407688559,4.52114453507145,5.51095643125756,7.55870949680614,10.2134879770104,6.98499100995342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,3.70456604565424,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.40654023910644,0,0,1.26203287766503,2.34263246577983,2.36965737506079,0.955875191810208,1.78238939265915,0.566153061577665,6.8817819284732,4.9683495844923,1.97643888973262,5.14114106274891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.540183282093931,1.29358683782755,1.50035924522115,2.12808280370728,1.60531935841864,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76195141904306,1.71868654031819,2.92150409984269,2.05524755931193,1.5107877947794,3.37511250115903,3.15224842256954,3.62513927187364,3.62432218226274,1.3492355185943,2.79317411380722,1.87806966329548,1.21553358534147,0.838452650511929,0.919217542250071,0.888986911206461,0.206035057238894,1.28367683836726,0,0,0.754505365544305,0.842773567228942,0.768301828858431,1.14870937911227,1.42888107384922,0.927074607558844,1.35036454324594,0.412085900803307,0.883193520806384,1.02860775715625,1.06485483695602,0.238436189947321,1.0174249164263,1.31753132581463,0.846146078916765,0.914639864363863,0.789209134313529,0.271608227691724,0.561142271657738,1.06771516311757,0.689531376628944,0,0.464810523557898,0.385813221962283,2.24829520144151,0.467863216890817,0.859484216193193,0,0,0
|short_description=p3@Srrm4
|short_description=p3@Srrm4
}}
}}

Latest revision as of 18:02, 1 October 2015

Short description:p3@Srrm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Srrm4_5end
Coexpression cluster:MCL_coexpression_mm9:1137
Association with transcript: -41bp_to_ENSMUST00000076124, NM_026886, uc008zfc.1, uc008zfd.1_5end
EntrezGene:Srrm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Srrm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C65.51
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G810.21
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system7.03e-4473
neurectoderm2.25e-4264
neural plate2.25e-4264
presumptive neural plate2.25e-4264
nervous system2.94e-4275
ectoderm-derived structure5.68e-4295
ectoderm5.68e-4295
presumptive ectoderm5.68e-4295
ecto-epithelium4.95e-3773
pre-chordal neural plate7.34e-3549
regional part of nervous system2.17e-3454
neural tube1.33e-3252
neural rod1.33e-3252
future spinal cord1.33e-3252
neural keel1.33e-3252
brain3.49e-3047
future brain3.49e-3047
regional part of brain6.43e-2946
anterior neural tube2.51e-2840
regional part of forebrain1.80e-2739
forebrain1.80e-2739
future forebrain1.80e-2739
structure with developmental contribution from neural crest4.38e-2692
gray matter5.87e-2534
brain grey matter1.23e-2229
regional part of telencephalon1.23e-2229
telencephalon1.23e-2229
cerebral cortex6.66e-1721
cerebral hemisphere6.66e-1721
pallium6.66e-1721
regional part of cerebral cortex3.90e-1217
occipital lobe8.33e-0910
visual cortex8.33e-0910
neocortex8.33e-0910
tube3.44e-08114
anatomical conduit1.38e-07122
eye5.18e-079
camera-type eye5.18e-079
simple eye5.18e-079
immature eye5.18e-079
ocular region5.18e-079
visual system5.18e-079
face5.18e-079
optic cup5.18e-079
optic vesicle5.18e-079
eye primordium5.18e-079
basal ganglion7.20e-078
nuclear complex of neuraxis7.20e-078
aggregate regional part of brain7.20e-078
collection of basal ganglia7.20e-078
cerebral subcortex7.20e-078
epithelium8.22e-07174
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