FFCP PHASE1:Mm9::chr3:142159755..142159768,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr3:142159755..142159768,+ to FFCP PHASE1:Mm9::chr3:142159755..142159768,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=229898 | |EntrezGene=229898 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=553 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BU78 | |UniProt=Q8BU78 | ||
|association_with_transcript=-95bp_to_ENSMUST00000045254_5end | |||
|cluster_id=chr3:142159755..142159768,+ | |||
|description=CAGE_peak_5_at_Gbp5_5end | |||
|id=chr3:142159755..142159768,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.67e-08!12;CL:0000084!1.84e-07!11;CL:0000827!1.84e-07!11;CL:0000791!2.23e-07!9;CL:0000789!2.23e-07!9;CL:0002420!2.23e-07!9;CL:0002419!2.23e-07!9;CL:0000790!2.23e-07!9;CL:0000542!2.47e-07!13;CL:0000051!2.47e-07!13;CL:0000988!6.59e-07!32;CL:0002032!6.59e-07!32;CL:0000037!6.59e-07!32;CL:0000566!6.59e-07!32;CL:0000837!6.59e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.10e-12,25;CL:0000553,2.29e-11,6;CL:0000556,2.29e-11,6;CL:0000988,4.48e-09,32;CL:0002032,4.48e-09,32;CL:0000037,4.48e-09,32;CL:0000837,4.48e-09,32;CL:0000838,2.28e-08,12;CL:0000542,1.05e-07,13;CL:0000051,1.05e-07,13;CL:0000050,1.35e-07,9;CL:0000791,1.77e-07,9;CL:0000789,1.77e-07,9;CL:0002420,1.77e-07,9;CL:0002419,1.77e-07,9;CL:0000790,1.77e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.47e-13!48;UBERON:0004177!1.31e-12!29;UBERON:0002390!1.32e-11!45;UBERON:0003061!1.32e-11!45;UBERON:0002405!9.28e-10!70;UBERON:0003408!1.31e-09!24;UBERON:0006562!2.64e-09!24;UBERON:0001557!2.64e-09!24;UBERON:0001042!2.64e-09!24;UBERON:0008814!2.64e-09!24;UBERON:0009145!2.64e-09!24;UBERON:0002370!4.39e-09!23;UBERON:0000974!4.39e-09!23;UBERON:0004807!4.39e-09!23;UBERON:0005058!4.39e-09!23;UBERON:0003351!4.39e-09!23;UBERON:0009113!4.39e-09!23;UBERON:0003295!4.39e-09!23;UBERON:0009722!4.39e-09!23;UBERON:0005562!4.39e-09!23;UBERON:0007690!4.39e-09!23;UBERON:0005057!5.13e-08!51;UBERON:0001004!1.35e-07!42;UBERON:0003081!1.47e-07!88;UBERON:0000072!1.76e-07!27;UBERON:0000077!3.35e-07!97;UBERON:0000065!3.67e-07!41;UBERON:0001041!9.75e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.29e-08,48;UBERON:0002405,2.29e-08,48;UBERON:0002390,2.34e-07,45;UBERON:0003061,2.34e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,10.4589891987677,0.703943610758334,0.70219357896598,0.34243593645101,0.319088635981346,3.76641605848653,3.14713448708391,0.666219523631325,2.02475267389826,0,6.30924330716475,7.12995054749842,4.2438965179803,0.255129870453209,0.0992909512008853,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,2.68452169692378,0.725362142011344,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.47344709117929,0.445326417194474,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.722996784599558,0,0,0.441683036920787,0,0,0,0,1.27728527604296,0.599075622529601,0.599902730993408,0.889491589511453,0.149790639404823,0.915001205637253,0,0.695297280769106,0.511430914660661,0,0,0,0.373220911830279,0,1.05220927943237,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0.295220295959204,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0,1.43768206527355,0,0.624075346229121,0,0.538192240565737,0,0.923765950833023,0.189491411770485,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0.655453258862952,0.690739927463582,1.01254341007058,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,1.02131881726136,0,0,0,0,0,0,0.304464949114599,0,0.42366414172764,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,3.2465467351592,0.206386867963223,0.370389054739423,0.753473828018764,1.6403307326523,1.14389086603261,1.18984900995699,1.25956307091292,0.967399816630967,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0.209718688851422,0,0,1.26404448251271,0.608175645870493,0.205421914329655,0.129920822977795,0.716106782669926,0.39736270956253,0.480781798079875,0.443068581523732,0.403865799792591,0.685861259894999,0.705783295957884,0.487289403698762,0.673482891482306,0.818138315270983,0.226730383615211,0,0,0,0.965947970160952,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,10.4589891987677,0.703943610758334,0.70219357896598,0.34243593645101,0.319088635981346,3.76641605848653,3.14713448708391,0.666219523631325,2.02475267389826,0,6.30924330716475,7.12995054749842,4.2438965179803,0.255129870453209,0.0992909512008853,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,2.68452169692378,0.725362142011344,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.47344709117929,0.445326417194474,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.722996784599558,0,0,0.441683036920787,0,0,0,0,1.27728527604296,0.599075622529601,0.599902730993408,0.889491589511453,0.149790639404823,0.915001205637253,0,0.695297280769106,0.511430914660661,0,0,0,0.373220911830279,0,1.05220927943237,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0.295220295959204,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0,1.43768206527355,0,0.624075346229121,0,0.538192240565737,0,0.923765950833023,0.189491411770485,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0.655453258862952,0.690739927463582,1.01254341007058,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,1.02131881726136,0,0,0,0,0,0,0.304464949114599,0,0.42366414172764,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,3.2465467351592,0.206386867963223,0.370389054739423,0.753473828018764,1.6403307326523,1.14389086603261,1.18984900995699,1.25956307091292,0.967399816630967,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0.209718688851422,0,0,1.26404448251271,0.608175645870493,0.205421914329655,0.129920822977795,0.716106782669926,0.39736270956253,0.480781798079875,0.443068581523732,0.403865799792591,0.685861259894999,0.705783295957884,0.487289403698762,0.673482891482306,0.818138315270983,0.226730383615211,0,0,0,0.965947970160952,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p5@Gbp5 | |||
}} | }} |
Latest revision as of 17:18, 1 October 2015
Short description: | p5@Gbp5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gbp5_5end |
Coexpression cluster: | MCL_coexpression_mm9:553 |
Association with transcript: | -95bp_to_ENSMUST00000045254_5end |
EntrezGene: | Gbp5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.10e-12 | 25 |
megakaryocyte progenitor cell | 2.29e-11 | 6 |
megakaryocyte | 2.29e-11 | 6 |
hematopoietic cell | 4.48e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.48e-09 | 32 |
hematopoietic stem cell | 4.48e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.48e-09 | 32 |
lymphoid lineage restricted progenitor cell | 2.28e-08 | 12 |
lymphocyte | 1.05e-07 | 13 |
common lymphoid progenitor | 1.05e-07 | 13 |
megakaryocyte-erythroid progenitor cell | 1.35e-07 | 9 |
mature alpha-beta T cell | 1.77e-07 | 9 |
alpha-beta T cell | 1.77e-07 | 9 |
immature T cell | 1.77e-07 | 9 |
mature T cell | 1.77e-07 | 9 |
immature alpha-beta T cell | 1.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.29e-08 | 48 |
immune system | 2.29e-08 | 48 |
hematopoietic system | 2.34e-07 | 45 |
blood island | 2.34e-07 | 45 |