FFCP PHASE1:Mm9::chr3:141832275..141832293,-: Difference between revisions
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{{FFCP|EntrezGene=12167|HGNC=|MCL_coexpression_id=27|UniProt=|association_with_transcript=-93bp_to_uc008roj.1,uc008rok.1_5end|description=CAGE_peak_5_at_Bmpr1b_5end|id=chr3:141832275..141832293,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000080,9.63e-11,4;UBERON:0005904,9.63e-11,4;UBERON:0006947,9.63e-11,4;UBERON:0002120,9.63e-11,4;UBERON:0004054,9.63e-11,4;UBERON:0004875,9.63e-11,4;UBERON:0004876,9.63e-11,4;UBERON:0005721,9.63e-11,4;UBERON:0005754,9.63e-11,4;UBERON:0007297,9.63e-11,4;UBERON:0010147,2.22e-10,2;UBERON:0003937,2.22e-10,2;UBERON:0005399,2.22e-10,2;UBERON:0004175,2.71e-08,9;UBERON:0005156,3.51e-08,26;UBERON:0000990,3.51e-08,26;UBERON:0003064,3.72e-08,14;UBERON:0001301,4.48e-07,3;UBERON:0006555,4.48e-07,3;UBERON:0005103,4.48e-07,3;UBERON:0000083,4.48e-07,3;UBERON:0009201,4.48e-07,3;UBERON:0004819,4.48e-07,3;UBERON:0006553,4.48e-07,3;UBERON:0003074,4.48e-07,3;UBERON:0003060,4.48e-07,3;UBERON:0002102,9.08e-07,7;UBERON:0004710,9.08e-07,7;UBERON:0005419,9.08e-07,7;UBERON:0005417,9.08e-07,7;UBERON:0005729,9.08e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,0,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0,0.22836775943812,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,1.42575109390443,0.373220911830279,1.0108910337347,0,1.30120442962704,0.229902104433473,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.187403449119458,0,0.431135985865684,0.945530400839096,1.75951124163949,0.43839146485515,0.834141747676794,1.39300866608867,1.23469281844766,0.995171334092466,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0.898819408654221,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.701358198903186,1.89709611372772,0.295220295959204,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.488894929326078,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,2.6968616189571,0.712262414669021,0.488660878060728,1.15479086080775,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0,0,19.8475558249466,0.32977250588296,0,0.241251699712623,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.648032044930808,1.46361807210128,0.87345025498471,0.809186078308924,0.495920734352016,1.30877970992015,0,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0.651021924219751,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,0.549454872801795,0.214368379079066,1.00314420807073,0,0.920650473014354,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.93408612825759,0.399024873401031,0.682934423016537,0.243106717068294,0,0.367687016900028,0.44449345560323,0.618105171716683,0,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.384150914429216,0.689225627467359,0.952587382566147,0.463537303779422,0.578727661391115,0.824171801606613,0.294397840268795,1.02860775715625,0.354951612318675,0.238436189947321,0.581385666529314,0.752875043322645,0.169229215783353,0.182927972872773,0.526139422875686,0.814824683075171,0,0.355905054372522,0.492522411877817,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0.695603506861264|short_description=p5@Bmpr1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12167 | |||
|HGNC= | |||
|MCL_coexpression_id=27 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-93bp_to_uc008roj.1,uc008rok.1_5end | |||
|cluster_id=chr3:141832275..141832293,- | |||
|description=CAGE_peak_5_at_Bmpr1b_5end | |||
|id=chr3:141832275..141832293,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000080,9.63e-11,4;UBERON:0005904,9.63e-11,4;UBERON:0006947,9.63e-11,4;UBERON:0002120,9.63e-11,4;UBERON:0004054,9.63e-11,4;UBERON:0004875,9.63e-11,4;UBERON:0004876,9.63e-11,4;UBERON:0005721,9.63e-11,4;UBERON:0005754,9.63e-11,4;UBERON:0007297,9.63e-11,4;UBERON:0010147,2.22e-10,2;UBERON:0003937,2.22e-10,2;UBERON:0005399,2.22e-10,2;UBERON:0004175,2.71e-08,9;UBERON:0005156,3.51e-08,26;UBERON:0000990,3.51e-08,26;UBERON:0003064,3.72e-08,14;UBERON:0001301,4.48e-07,3;UBERON:0006555,4.48e-07,3;UBERON:0005103,4.48e-07,3;UBERON:0000083,4.48e-07,3;UBERON:0009201,4.48e-07,3;UBERON:0004819,4.48e-07,3;UBERON:0006553,4.48e-07,3;UBERON:0003074,4.48e-07,3;UBERON:0003060,4.48e-07,3;UBERON:0002102,9.08e-07,7;UBERON:0004710,9.08e-07,7;UBERON:0005419,9.08e-07,7;UBERON:0005417,9.08e-07,7;UBERON:0005729,9.08e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,0,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0,0.22836775943812,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,1.42575109390443,0.373220911830279,1.0108910337347,0,1.30120442962704,0.229902104433473,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.187403449119458,0,0.431135985865684,0.945530400839096,1.75951124163949,0.43839146485515,0.834141747676794,1.39300866608867,1.23469281844766,0.995171334092466,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0.898819408654221,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.701358198903186,1.89709611372772,0.295220295959204,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.488894929326078,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,2.6968616189571,0.712262414669021,0.488660878060728,1.15479086080775,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0,0,19.8475558249466,0.32977250588296,0,0.241251699712623,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.648032044930808,1.46361807210128,0.87345025498471,0.809186078308924,0.495920734352016,1.30877970992015,0,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0.651021924219751,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,0.549454872801795,0.214368379079066,1.00314420807073,0,0.920650473014354,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.93408612825759,0.399024873401031,0.682934423016537,0.243106717068294,0,0.367687016900028,0.44449345560323,0.618105171716683,0,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.384150914429216,0.689225627467359,0.952587382566147,0.463537303779422,0.578727661391115,0.824171801606613,0.294397840268795,1.02860775715625,0.354951612318675,0.238436189947321,0.581385666529314,0.752875043322645,0.169229215783353,0.182927972872773,0.526139422875686,0.814824683075171,0,0.355905054372522,0.492522411877817,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0.695603506861264 | |||
|short_description=p5@Bmpr1b | |||
}} |
Latest revision as of 17:16, 1 October 2015
Short description: | p5@Bmpr1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bmpr1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | -93bp_to_uc008roj.1, uc008rok.1_5end |
EntrezGene: | Bmpr1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesonephros | 9.63e-11 | 4 |
duct of male reproductive system | 9.63e-11 | 4 |
male genital duct | 9.63e-11 | 4 |
pronephros | 9.63e-11 | 4 |
internal male genitalia | 9.63e-11 | 4 |
nephrogenic cord | 9.63e-11 | 4 |
urogenital ridge | 9.63e-11 | 4 |
pronephric mesoderm | 9.63e-11 | 4 |
rostral part of nephrogenic cord | 9.63e-11 | 4 |
presumptive pronephric mesoderm | 9.63e-11 | 4 |
male accessory sex gland | 2.22e-10 | 2 |
sex gland | 2.22e-10 | 2 |
male reproductive gland | 2.22e-10 | 2 |
internal genitalia | 2.71e-08 | 9 |
reproductive structure | 3.51e-08 | 26 |
reproductive system | 3.51e-08 | 26 |
intermediate mesoderm | 3.72e-08 | 14 |
epididymis | 4.48e-07 | 3 |
excretory tube | 4.48e-07 | 3 |
mesonephric epithelium | 4.48e-07 | 3 |
mesonephric tubule | 4.48e-07 | 3 |
nephric duct | 4.48e-07 | 3 |
kidney epithelium | 4.48e-07 | 3 |
renal duct | 4.48e-07 | 3 |
mesonephric duct | 4.48e-07 | 3 |
pronephric duct | 4.48e-07 | 3 |
forelimb | 9.08e-07 | 7 |
pectoral appendage | 9.08e-07 | 7 |
pectoral appendage bud | 9.08e-07 | 7 |
forelimb bud | 9.08e-07 | 7 |
forelimb/pectoral fin field | 9.08e-07 | 7 |