FFCP PHASE1:Mm9::chr3:141645188..141645201,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12167 | |EntrezGene=12167 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=B2RRZ4,P36898 | |UniProt=B2RRZ4,P36898 | ||
|association_with_transcript=13bp_to_NM_007560,uc008roi.1_5end | |association_with_transcript=13bp_to_NM_007560,uc008roi.1_5end | ||
|cluster_id=chr3:141645188..141645201,- | |||
|description=CAGE_peak_6_at_Bmpr1b_5end | |description=CAGE_peak_6_at_Bmpr1b_5end | ||
|id=chr3:141645188..141645201,- | |id=chr3:141645188..141645201,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.29e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.76e-12!21;UBERON:0001049!1.37e-11!52;UBERON:0005068!1.37e-11!52;UBERON:0006241!1.37e-11!52;UBERON:0007135!1.37e-11!52;UBERON:0000955!3.05e-10!50;UBERON:0006238!3.05e-10!50;UBERON:0001017!7.34e-10!73;UBERON:0005743!7.34e-10!73;UBERON:0002616!1.59e-09!49;UBERON:0002020!2.09e-09!34;UBERON:0000073!2.75e-09!75;UBERON:0001016!2.75e-09!75;UBERON:0000033!7.02e-09!63;UBERON:0002346!2.62e-08!71;UBERON:0003075!2.62e-08!71;UBERON:0007284!2.62e-08!71;UBERON:0002113!3.94e-08!14;UBERON:0003918!3.94e-08!14;UBERON:0005095!3.94e-08!14;UBERON:0007687!3.94e-08!14;UBERON:0003076!4.33e-08!12;UBERON:0003057!4.33e-08!12;UBERON:0006554!8.18e-08!16;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0001008!3.95e-07!17;UBERON:0002240!5.22e-07!6;UBERON:0005174!5.22e-07!6;UBERON:0001137!5.22e-07!6 | |ontology_enrichment_uberon=UBERON:0000489!1.76e-12!21;UBERON:0001049!1.37e-11!52;UBERON:0005068!1.37e-11!52;UBERON:0006241!1.37e-11!52;UBERON:0007135!1.37e-11!52;UBERON:0000955!3.05e-10!50;UBERON:0006238!3.05e-10!50;UBERON:0001017!7.34e-10!73;UBERON:0005743!7.34e-10!73;UBERON:0002616!1.59e-09!49;UBERON:0002020!2.09e-09!34;UBERON:0000073!2.75e-09!75;UBERON:0001016!2.75e-09!75;UBERON:0000033!7.02e-09!63;UBERON:0002346!2.62e-08!71;UBERON:0003075!2.62e-08!71;UBERON:0007284!2.62e-08!71;UBERON:0002113!3.94e-08!14;UBERON:0003918!3.94e-08!14;UBERON:0005095!3.94e-08!14;UBERON:0007687!3.94e-08!14;UBERON:0003076!4.33e-08!12;UBERON:0003057!4.33e-08!12;UBERON:0006554!8.18e-08!16;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0001008!3.95e-07!17;UBERON:0002240!5.22e-07!6;UBERON:0005174!5.22e-07!6;UBERON:0001137!5.22e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.43e-15,54;UBERON:0001017,1.54e-13,73;UBERON:0001016,4.34e-13,75;UBERON:0001049,6.60e-12,52;UBERON:0005068,6.60e-12,52;UBERON:0006241,6.60e-12,52;UBERON:0007135,6.60e-12,52;UBERON:0004684,5.29e-11,3;UBERON:0002275,5.29e-11,3;UBERON:0004121,6.73e-11,95;UBERON:0000924,6.73e-11,95;UBERON:0006601,6.73e-11,95;UBERON:0002346,1.27e-10,64;UBERON:0003075,1.27e-10,64;UBERON:0007284,1.27e-10,64;UBERON:0000955,1.28e-09,47;UBERON:0006238,1.28e-09,47;UBERON:0010371,5.77e-09,73;UBERON:0001896,6.84e-09,2;UBERON:0002298,6.84e-09,2;UBERON:0005290,6.84e-09,2;UBERON:0010096,6.84e-09,2;UBERON:0002616,3.40e-08,46;UBERON:0000489,4.35e-08,21;UBERON:0003076,6.20e-08,12;UBERON:0003057,6.20e-08,12;UBERON:0002020,1.46e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0,1.71390590642282,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,1.14918604276669,1.22885226604995,0,0,0,0.837548997004143,0,1.68078072554491,1.47314292736834,0.996601765593721,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.722996784599558,0,0.323533699894818,0,0,1.86391761218122,0.292780797011547,0.83778682725382,0,0,0,0,0.748953197024114,1.83000241127451,0.376963056338593,2.25971616249959,0.511430914660661,2.70124457927428,1.94689515681309,0.101839363850316,0.995255764880744,2.27450482590307,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0,1.03481348295606,0,0,0.175951124163949,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.350679099451593,0.822074982615345,1.18088118383682,0.941992367048249,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.651859905768103,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0,2.24770825982909,2.57865710502847,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00943262421218,0.564751842617067,2.76195141904306,2.29158205375759,0.68741272937475,0,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.962757628775446,0,0,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0,1.71390590642282,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,1.14918604276669,1.22885226604995,0,0,0,0.837548997004143,0,1.68078072554491,1.47314292736834,0.996601765593721,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.722996784599558,0,0.323533699894818,0,0,1.86391761218122,0.292780797011547,0.83778682725382,0,0,0,0,0.748953197024114,1.83000241127451,0.376963056338593,2.25971616249959,0.511430914660661,2.70124457927428,1.94689515681309,0.101839363850316,0.995255764880744,2.27450482590307,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0,1.03481348295606,0,0,0.175951124163949,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.350679099451593,0.822074982615345,1.18088118383682,0.941992367048249,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.651859905768103,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0,2.24770825982909,2.57865710502847,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00943262421218,0.564751842617067,2.76195141904306,2.29158205375759,0.68741272937475,0,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.962757628775446,0,0,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p6@Bmpr1b | |short_description=p6@Bmpr1b | ||
}} | }} |
Latest revision as of 17:14, 1 October 2015
Short description: | p6@Bmpr1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Bmpr1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 13bp_to_NM_007560, uc008roi.1_5end |
EntrezGene: | Bmpr1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.29e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.43e-15 | 54 |
central nervous system | 1.54e-13 | 73 |
nervous system | 4.34e-13 | 75 |
neural tube | 6.60e-12 | 52 |
neural rod | 6.60e-12 | 52 |
future spinal cord | 6.60e-12 | 52 |
neural keel | 6.60e-12 | 52 |
raphe nuclei | 5.29e-11 | 3 |
reticular formation | 5.29e-11 | 3 |
ectoderm-derived structure | 6.73e-11 | 95 |
ectoderm | 6.73e-11 | 95 |
presumptive ectoderm | 6.73e-11 | 95 |
neurectoderm | 1.27e-10 | 64 |
neural plate | 1.27e-10 | 64 |
presumptive neural plate | 1.27e-10 | 64 |
brain | 1.28e-09 | 47 |
future brain | 1.28e-09 | 47 |
ecto-epithelium | 5.77e-09 | 73 |
medulla oblongata | 6.84e-09 | 2 |
brainstem | 6.84e-09 | 2 |
myelencephalon | 6.84e-09 | 2 |
future myelencephalon | 6.84e-09 | 2 |
regional part of brain | 3.40e-08 | 46 |
cavitated compound organ | 4.35e-08 | 21 |
posterior neural tube | 6.20e-08 | 12 |
chordal neural plate | 6.20e-08 | 12 |
gray matter | 1.46e-07 | 34 |