FFCP PHASE1:Mm9::chr3:141594530..141594540,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12167 | |EntrezGene=12167 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=117 | |||
|TSSclassifier=NA | |||
|UniProt=P36898,B2RRZ4,Q3USS1 | |UniProt=P36898,B2RRZ4,Q3USS1 | ||
|association_with_transcript=-43bp_to_ENSMUST00000106232,uc008rog.1,uc008roh.1_5end | |association_with_transcript=-43bp_to_ENSMUST00000106232,uc008rog.1,uc008roh.1_5end | ||
|cluster_id=chr3:141594530..141594540,- | |||
|description=CAGE_peak_16_at_Bmpr1b_5end | |description=CAGE_peak_16_at_Bmpr1b_5end | ||
|id=chr3:141594530..141594540,- | |id=chr3:141594530..141594540,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.26e-16!63;UBERON:0000970!1.76e-16!9;UBERON:0000019!1.76e-16!9;UBERON:0000047!1.76e-16!9;UBERON:0004088!1.76e-16!9;UBERON:0002104!1.76e-16!9;UBERON:0001456!1.76e-16!9;UBERON:0003072!1.76e-16!9;UBERON:0003071!1.76e-16!9;UBERON:0004128!1.76e-16!9;UBERON:0002346!1.91e-15!71;UBERON:0003075!1.91e-15!71;UBERON:0007284!1.91e-15!71;UBERON:0003056!6.05e-14!49;UBERON:0001444!3.40e-13!11;UBERON:0000020!5.81e-12!12;UBERON:0001032!5.81e-12!12;UBERON:0004456!5.81e-12!12;UBERON:0004121!6.59e-12!102;UBERON:0000924!6.59e-12!102;UBERON:0006601!6.59e-12!102;UBERON:0005085!6.40e-11!13;UBERON:0007811!1.48e-10!86;UBERON:0001049!2.68e-09!52;UBERON:0005068!2.68e-09!52;UBERON:0006241!2.68e-09!52;UBERON:0007135!2.68e-09!52;UBERON:0000153!3.75e-09!94;UBERON:0002616!7.25e-09!49;UBERON:0000955!1.30e-08!50;UBERON:0006238!1.30e-08!50;UBERON:0001017!3.68e-08!73;UBERON:0005743!3.68e-08!73;UBERON:0000073!8.12e-08!75;UBERON:0001016!8.12e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.01e-10,9;UBERON:0000019,1.01e-10,9;UBERON:0000047,1.01e-10,9;UBERON:0010312,1.01e-10,9;UBERON:0004088,1.01e-10,9;UBERON:0002104,1.01e-10,9;UBERON:0001456,1.01e-10,9;UBERON:0003072,1.01e-10,9;UBERON:0004128,1.01e-10,9;UBERON:0003071,1.01e-10,9;UBERON:0001444,5.79e-09,11;UBERON:0000992,1.13e-08,3;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0000020,2.66e-08,12;UBERON:0001032,2.66e-08,12;UBERON:0004456,2.66e-08,12;UBERON:0000033,9.70e-08,13;UBERON:0005085,9.70e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,0.780722657776222,1.14951052216736,1.80062129805349,0.753524089178575,0.340182495756639,0.768682321709099,0.749613796477831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,5.25178315270594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,0.780722657776222,1.14951052216736,1.80062129805349,0.753524089178575,0.340182495756639,0.768682321709099,0.749613796477831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,5.25178315270594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p16@Bmpr1b | |short_description=p16@Bmpr1b | ||
}} | }} |
Latest revision as of 17:14, 1 October 2015
Short description: | p16@Bmpr1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Bmpr1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:117 |
Association with transcript: | -43bp_to_ENSMUST00000106232, uc008rog.1, uc008roh.1_5end |
EntrezGene: | Bmpr1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.01e-10 | 9 |
camera-type eye | 1.01e-10 | 9 |
simple eye | 1.01e-10 | 9 |
immature eye | 1.01e-10 | 9 |
ocular region | 1.01e-10 | 9 |
visual system | 1.01e-10 | 9 |
face | 1.01e-10 | 9 |
optic cup | 1.01e-10 | 9 |
optic vesicle | 1.01e-10 | 9 |
eye primordium | 1.01e-10 | 9 |
subdivision of head | 5.79e-09 | 11 |
female gonad | 1.13e-08 | 3 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
sense organ | 2.66e-08 | 12 |
sensory system | 2.66e-08 | 12 |
entire sense organ system | 2.66e-08 | 12 |
head | 9.70e-08 | 13 |
ectodermal placode | 9.70e-08 | 13 |