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FFCP PHASE1:Mm9::chr1:84692447..84692467,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:84692447..84692467,-
|DHSsupport=NA
|short_description=p4@Dner
|DPIdataset=NA
|description=CAGE_peak_4_at_Dner_5end
|association_with_transcript=328bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end
|EntrezGene=227325
|EntrezGene=227325
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8JZM4
|UniProt=Q8JZM4
|association_with_transcript=328bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end
|cluster_id=chr1:84692447..84692467,-
|description=CAGE_peak_4_at_Dner_5end
|id=chr1:84692447..84692467,-
|ontology_enrichment_celltype=CL:0000221!4.93e-20!44;CL:0000133!4.93e-20!44;CL:0002319!7.44e-20!43;CL:0000117!8.25e-19!23;CL:0000337!8.25e-19!23;CL:0000540!8.23e-18!33;CL:0000047!8.23e-18!33;CL:0000031!8.23e-18!33;CL:0000404!8.23e-18!33;CL:0000055!1.02e-14!50;CL:0000393!5.74e-13!39;CL:0000211!5.74e-13!39;CL:0002321!2.70e-07!70;CL:0000220!2.70e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000117,2.44e-26,23;CL:0000337,2.44e-26,23;CL:0002319,1.92e-21,43;CL:0000221,1.06e-20,44;CL:0000133,1.06e-20,44;CL:0000540,2.00e-18,33;CL:0000047,2.00e-18,33;CL:0000031,2.00e-18,33;CL:0000404,2.00e-18,33;CL:0000393,3.04e-14,39;CL:0000211,3.04e-14,39;CL:0002321,3.60e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.33e-42!73;UBERON:0005743!2.33e-42!73;UBERON:0000073!2.61e-41!75;UBERON:0001016!2.61e-41!75;UBERON:0004121!8.47e-37!102;UBERON:0000924!8.47e-37!102;UBERON:0006601!8.47e-37!102;UBERON:0002346!2.02e-33!71;UBERON:0003075!2.02e-33!71;UBERON:0007284!2.02e-33!71;UBERON:0001049!9.83e-33!52;UBERON:0005068!9.83e-33!52;UBERON:0006241!9.83e-33!52;UBERON:0007135!9.83e-33!52;UBERON:0000033!6.72e-32!63;UBERON:0000955!8.08e-31!50;UBERON:0006238!8.08e-31!50;UBERON:0002616!5.36e-30!49;UBERON:0003056!5.28e-26!49;UBERON:0003080!1.51e-24!40;UBERON:0002780!1.27e-23!39;UBERON:0001890!1.27e-23!39;UBERON:0006240!1.27e-23!39;UBERON:0002020!2.36e-23!34;UBERON:0002791!6.10e-19!29;UBERON:0003528!6.10e-19!29;UBERON:0001893!6.10e-19!29;UBERON:0007811!3.28e-17!86;UBERON:0000153!9.16e-14!94;UBERON:0000956!9.95e-13!21;UBERON:0001869!9.95e-13!21;UBERON:0000203!9.95e-13!21;UBERON:0002619!2.14e-10!17;UBERON:0003076!2.01e-08!12;UBERON:0003057!2.01e-08!12;UBERON:0002420!1.64e-07!8;UBERON:0007245!1.64e-07!8;UBERON:0010009!1.64e-07!8;UBERON:0010011!1.64e-07!8;UBERON:0000454!1.64e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.26e-49,73;UBERON:0001016,4.89e-47,75;UBERON:0000073,3.13e-45,54;UBERON:0001049,2.25e-42,52;UBERON:0005068,2.25e-42,52;UBERON:0006241,2.25e-42,52;UBERON:0007135,2.25e-42,52;UBERON:0004121,8.86e-37,95;UBERON:0000924,8.86e-37,95;UBERON:0006601,8.86e-37,95;UBERON:0000955,7.18e-36,47;UBERON:0006238,7.18e-36,47;UBERON:0002346,1.23e-35,64;UBERON:0003075,1.23e-35,64;UBERON:0007284,1.23e-35,64;UBERON:0002616,9.78e-35,46;UBERON:0002020,6.94e-33,34;UBERON:0003080,2.02e-30,40;UBERON:0010371,3.55e-29,73;UBERON:0002780,3.92e-29,39;UBERON:0001890,3.92e-29,39;UBERON:0006240,3.92e-29,39;UBERON:0003056,1.39e-26,49;UBERON:0003528,1.58e-26,29;UBERON:0002791,1.58e-26,29;UBERON:0001893,1.58e-26,29;UBERON:0010314,8.90e-20,92;UBERON:0000956,1.37e-17,21;UBERON:0001869,1.37e-17,21;UBERON:0000203,1.37e-17,21;UBERON:0002619,3.06e-14,17;UBERON:0003076,9.27e-12,12;UBERON:0003057,9.27e-12,12;UBERON:0000025,5.72e-11,114;UBERON:0002420,4.16e-10,8;UBERON:0007245,4.16e-10,8;UBERON:0010009,4.16e-10,8;UBERON:0010011,4.16e-10,8;UBERON:0000454,4.16e-10,8;UBERON:0004111,2.40e-09,122;UBERON:0002021,9.27e-09,10;UBERON:0000411,9.27e-09,10;UBERON:0001950,9.27e-09,10;UBERON:0002240,2.34e-08,6;UBERON:0005174,2.34e-08,6;UBERON:0001137,2.34e-08,6;UBERON:0001948,1.74e-07,5;UBERON:0002315,1.74e-07,5;UBERON:0001954,6.38e-07,7;UBERON:0003022,6.38e-07,7;UBERON:0002421,6.38e-07,7;UBERON:0000349,6.38e-07,7;UBERON:0002600,6.38e-07,7;UBERON:0011216,6.63e-07,194
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.09843091367236,2.91644848611425,1.53985063787899,7.18762821824858,0,0,0,0,0,0,10.3181395038395,13.7537654610729,20.9164363157039,0,0,0,0,0,3.29560121570245,6.14749288514487,3.00699875694585,3.78016627328734,2.73422449756797,15.7108041422092,10.6016899656774,5.14461356702807,4.40889166683887,5.51531271966013,13.2139057199266,9.44886301830389,12.2885226604995,8.70449499019279,7.41049913179518,11.4600941522487,9.49222196604695,12.9435400307286,12.3766580699216,15.6153150301044,14.2371680799103,11.3703661953433,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,8.49064311333487,10.8912287542997,0,0,0,0,14.5296920222678,4.11750542536764,11.9371634507221,6.08385120672968,4.85859368927628,6.64921742590592,5.84068547043927,0,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,1.63287597963187,0.640568601424249,1.3118241438362,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,5.65975368086064,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,6.56385444916338,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,1.13230612315533,0.809621403349789,0.876767573733936,1.58115111178609,7.39039027770156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42571487479924,0.36012218806262,0.517434735131018,0.857348140126369,2.48276327099183,2.14042581122485,1.48094118541909,3.34911444026059,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0.234714477291508,0.39061315453185,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0,0,0,3.95326289831947,1.84130094602871,2.86447756719698,5.499301834998,2.05524755931193,3.7769694869485,2.70009000092722,2.2516060161211,1.35942722695261,4.14208249401456,0,0.399024873401031,1.02440163452481,0.243106717068294,1.88651846365184,0.183843508450014,0.666740183404846,1.85431551515005,0.962757628775446,1.01078884705519,0.50695859978048,1.69763707247469,1.31098110457835,1.21647789569252,1.32101578597911,0.952587382566147,1.39061191133827,1.73618298417335,0.824171801606613,1.03039244094078,0.685738504770831,0.887379030796687,0.715308569841963,1.59881058295561,1.03520318456864,1.4384483341585,1.82927972872773,0.526139422875686,0.814824683075171,1.12228454331548,1.30498519936592,0.985044823755635,1.63692417267876,1.39443157067369,1.73615949883027,4.49659040288303,1.16965804222704,1.28922632428979,0.956441660344217,0.441182838239031,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.09843091367236,2.91644848611425,1.53985063787899,7.18762821824858,0,0,0,0,0,0,10.3181395038395,13.7537654610729,20.9164363157039,0,0,0,0,0,3.29560121570245,6.14749288514487,3.00699875694585,3.78016627328734,2.73422449756797,15.7108041422092,10.6016899656774,5.14461356702807,4.40889166683887,5.51531271966013,13.2139057199266,9.44886301830389,12.2885226604995,8.70449499019279,7.41049913179518,11.4600941522487,9.49222196604695,12.9435400307286,12.3766580699216,15.6153150301044,14.2371680799103,11.3703661953433,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,8.49064311333487,10.8912287542997,0,0,0,0,14.5296920222678,4.11750542536764,11.9371634507221,6.08385120672968,4.85859368927628,6.64921742590592,5.84068547043927,0,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,1.63287597963187,0.640568601424249,1.3118241438362,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,5.65975368086064,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,6.56385444916338,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,1.13230612315533,0.809621403349789,0.876767573733936,1.58115111178609,7.39039027770156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42571487479924,0.36012218806262,0.517434735131018,0.857348140126369,2.48276327099183,2.14042581122485,1.48094118541909,3.34911444026059,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0.234714477291508,0.39061315453185,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0,0,0,3.95326289831947,1.84130094602871,2.86447756719698,5.499301834998,2.05524755931193,3.7769694869485,2.70009000092722,2.2516060161211,1.35942722695261,4.14208249401456,0,0.399024873401031,1.02440163452481,0.243106717068294,1.88651846365184,0.183843508450014,0.666740183404846,1.85431551515005,0.962757628775446,1.01078884705519,0.50695859978048,1.69763707247469,1.31098110457835,1.21647789569252,1.32101578597911,0.952587382566147,1.39061191133827,1.73618298417335,0.824171801606613,1.03039244094078,0.685738504770831,0.887379030796687,0.715308569841963,1.59881058295561,1.03520318456864,1.4384483341585,1.82927972872773,0.526139422875686,0.814824683075171,1.12228454331548,1.30498519936592,0.985044823755635,1.63692417267876,1.39443157067369,1.73615949883027,4.49659040288303,1.16965804222704,1.28922632428979,0.956441660344217,0.441182838239031,0.463735671240843
|short_description=p4@Dner
}}
}}

Latest revision as of 16:50, 1 October 2015

Short description:p4@Dner
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Dner_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 328bp_to_ENSMUST00000049126, NM_152915, uc007bsw.1, uc007bsx.1_5end
EntrezGene:Dner
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Dner

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.53
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F111.94
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.44e-2623
neuroblast (sensu Vertebrata)2.44e-2623
neural cell1.92e-2143
ectodermal cell1.06e-2044
neurectodermal cell1.06e-2044
neuron2.00e-1833
neuronal stem cell2.00e-1833
neuroblast2.00e-1833
electrically signaling cell2.00e-1833
electrically responsive cell3.04e-1439
electrically active cell3.04e-1439
embryonic cell3.60e-0970

Uber anatomy
Ontology termp-valuen
central nervous system7.26e-4973
nervous system4.89e-4775
regional part of nervous system3.13e-4554
neural tube2.25e-4252
neural rod2.25e-4252
future spinal cord2.25e-4252
neural keel2.25e-4252
ectoderm-derived structure8.86e-3795
ectoderm8.86e-3795
presumptive ectoderm8.86e-3795
brain7.18e-3647
future brain7.18e-3647
neurectoderm1.23e-3564
neural plate1.23e-3564
presumptive neural plate1.23e-3564
regional part of brain9.78e-3546
gray matter6.94e-3334
anterior neural tube2.02e-3040
ecto-epithelium3.55e-2973
regional part of forebrain3.92e-2939
forebrain3.92e-2939
future forebrain3.92e-2939
pre-chordal neural plate1.39e-2649
brain grey matter1.58e-2629
regional part of telencephalon1.58e-2629
telencephalon1.58e-2629
structure with developmental contribution from neural crest8.90e-2092
cerebral cortex1.37e-1721
cerebral hemisphere1.37e-1721
pallium1.37e-1721
regional part of cerebral cortex3.06e-1417
posterior neural tube9.27e-1212
chordal neural plate9.27e-1212
tube5.72e-11114
basal ganglion4.16e-108
nuclear complex of neuraxis4.16e-108
aggregate regional part of brain4.16e-108
collection of basal ganglia4.16e-108
cerebral subcortex4.16e-108
anatomical conduit2.40e-09122
occipital lobe9.27e-0910
visual cortex9.27e-0910
neocortex9.27e-0910
spinal cord2.34e-086
dorsal region element2.34e-086
dorsum2.34e-086
regional part of spinal cord1.74e-075
gray matter of spinal cord1.74e-075
Ammon's horn6.38e-077
lobe parts of cerebral cortex6.38e-077
hippocampal formation6.38e-077
limbic system6.38e-077
limbic lobe6.38e-077
organ system subdivision6.63e-07194
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