FFCP PHASE1:Mm9::chr1:78306952..78306961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=433323 | |EntrezGene=433323 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=Q810K3 | |UniProt=Q810K3 | ||
|association_with_transcript=31bp_to_ENSMUST00000036172,NM_001004173,uc007bqe.1_5end | |association_with_transcript=31bp_to_ENSMUST00000036172,NM_001004173,uc007bqe.1_5end | ||
|cluster_id=chr1:78306952..78306961,+ | |||
|description=CAGE_peak_3_at_Sgpp2_5end | |description=CAGE_peak_3_at_Sgpp2_5end | ||
|id=chr1:78306952..78306961,+ | |id=chr1:78306952..78306961,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.96e-14,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.11e-09!59;UBERON:0000160!2.18e-09!43;UBERON:0001242!1.36e-07!13;UBERON:0000060!1.36e-07!13;UBERON:0001262!1.36e-07!13;UBERON:0004786!1.36e-07!13;UBERON:0000344!3.30e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.96e-14,3;UBERON:0002275,1.96e-14,3;UBERON:0004733,1.33e-12,6;UBERON:0004732,1.33e-12,6;UBERON:0002028,1.33e-12,6;UBERON:0007277,1.33e-12,6;UBERON:0001896,4.66e-10,2;UBERON:0002298,4.66e-10,2;UBERON:0005290,4.66e-10,2;UBERON:0010096,4.66e-10,2;UBERON:0003076,1.37e-09,12;UBERON:0003057,1.37e-09,12;UBERON:0000073,2.70e-08,54;UBERON:0001017,3.16e-08,73;UBERON:0001016,5.97e-08,75 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,1.50268718983904,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40463523997555,1.53224805702225,1.99688493233117,0,0,0,1.3959149950069,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,2.63502717310392,3.77004072264219,0.255457055208591,0,0,0,1.49790639404823,1.37250180845588,0,0.521472960576829,0,1.0389402227978,0.486723789203273,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,1.65209391491899,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0.648414149624083,0.796565093017469,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,1.09899109488962,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.433947175744535,0,0,0,0,2.72936002979246,1.64096361229084,0,0,0,0,1.07711698866399,0,0,0,0,0,0,0.321321316421807,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0.358117032009409,0.164140899745061,0.291480836629851,3.33765543618917,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.743881101528023,0.523511883968059,0.388844919875379,0,5.07323644815771,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.2604087696879,0.104859344425711,1.69108884578204,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,1.50268718983904,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40463523997555,1.53224805702225,1.99688493233117,0,0,0,1.3959149950069,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,2.63502717310392,3.77004072264219,0.255457055208591,0,0,0,1.49790639404823,1.37250180845588,0,0.521472960576829,0,1.0389402227978,0.486723789203273,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,1.65209391491899,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0.648414149624083,0.796565093017469,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,1.09899109488962,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.433947175744535,0,0,0,0,2.72936002979246,1.64096361229084,0,0,0,0,1.07711698866399,0,0,0,0,0,0,0.321321316421807,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0.358117032009409,0.164140899745061,0.291480836629851,3.33765543618917,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.743881101528023,0.523511883968059,0.388844919875379,0,5.07323644815771,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.2604087696879,0.104859344425711,1.69108884578204,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p3@Sgpp2 | |short_description=p3@Sgpp2 | ||
}} | }} |
Latest revision as of 15:40, 1 October 2015
Short description: | p3@Sgpp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sgpp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | 31bp_to_ENSMUST00000036172, NM_001004173, uc007bqe.1_5end |
EntrezGene: | Sgpp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.96e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.96e-14 | 3 |
reticular formation | 1.96e-14 | 3 |
segmental subdivision of hindbrain | 1.33e-12 | 6 |
segmental subdivision of nervous system | 1.33e-12 | 6 |
hindbrain | 1.33e-12 | 6 |
presumptive hindbrain | 1.33e-12 | 6 |
medulla oblongata | 4.66e-10 | 2 |
brainstem | 4.66e-10 | 2 |
myelencephalon | 4.66e-10 | 2 |
future myelencephalon | 4.66e-10 | 2 |
posterior neural tube | 1.37e-09 | 12 |
chordal neural plate | 1.37e-09 | 12 |
regional part of nervous system | 2.70e-08 | 54 |
central nervous system | 3.16e-08 | 73 |
nervous system | 5.97e-08 | 75 |