FFCP PHASE1:Mm9::chr16:13903092..13903107,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94184 | |EntrezGene=94184 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q99K01 | |UniProt=Q99K01 | ||
|association_with_transcript=6bp_to_ENSMUST00000115804_5end | |association_with_transcript=6bp_to_ENSMUST00000115804_5end | ||
|cluster_id=chr16:13903092..13903107,- | |||
|description=CAGE_peak_4_at_Pdxdc1_5end | |description=CAGE_peak_4_at_Pdxdc1_5end | ||
|id=chr16:13903092..13903107,- | |id=chr16:13903092..13903107,- | ||
|ontology_enrichment_celltype=CL:0000066!6.51e-10!25;CL:0000223!7.66e-08!20 | |ontology_enrichment_celltype=CL:0000066!6.51e-10!25;CL:0000223!7.66e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.50e-10,25;CL:0000223,7.66e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.84e-16!43;UBERON:0005409!2.02e-14!59;UBERON:0004119!1.44e-09!130;UBERON:0000925!1.44e-09!130;UBERON:0006595!1.44e-09!130;UBERON:0001007!1.86e-09!128;UBERON:0001555!1.86e-09!128;UBERON:0007026!1.86e-09!128;UBERON:0000344!4.90e-09!15;UBERON:0004921!6.26e-09!126;UBERON:0004185!6.26e-09!126;UBERON:0001242!1.42e-08!13;UBERON:0000060!1.42e-08!13;UBERON:0001262!1.42e-08!13;UBERON:0004786!1.42e-08!13;UBERON:0002108!1.41e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.31e-12,31;UBERON:0005409,3.96e-10,47;UBERON:0000344,4.89e-09,15;UBERON:0001242,1.42e-08,13;UBERON:0001262,1.42e-08,13;UBERON:0004786,1.42e-08,13 | |||
|phase1_expression=5.60520964866779,21.6364752736404,13.1949779422965,18.7527811010235,13.5241847085514,15.277013743982,12.1478573109673,2.58246646883153,4.36445038670167,2.80877431586392,2.56826952338257,2.39316476986009,3.59521532855532,2.44777126773193,2.99798785634096,2.02475267389826,0.699561878128147,1.41957974411207,2.87940310572051,2.54633791078818,3.74190476664707,1.09220046320974,0.783599367416806,6.07971206614945,8.48814339948529,15.5042630311055,21.1073378117947,14.2211013572687,15.0118501370535,12.0974462284767,11.0865255327652,1.27006134691926,2.46025915033828,0,9.53210345179206,6.64938581433969,7.9626048942324,3.34825304589526,3.906676722619,4.18818995179039,1.17646297606203,0,2.42755176515577,4.28049181116963,5.27160042341476,5.32285581268876,3.9119567217402,2.18025156380447,2.19686182734472,4.47188767870852,2.79972843250725,2.87505128729943,4.02678254538567,4.35217285206807,3.6970317905671,8.7468208252222,5.73066879877513,4.12537673821954,2.42779753031517,3.70293685490423,3.1691570175309,3.04960078862219,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.49800055259202,1.15265491596466,4.04389488003063,2.70011876663381,2.52389953621658,2.28520787523043,4.19650227808066,2.9397791811589,2.30029130443767,2.75765635983006,4.40463523997555,7.78892762319645,6.29786786350598,3.16527090552465,3.93396867490361,0.52091337055676,3.35019598801657,4.50210088025344,5.95913166329559,5.00868595305235,5.26775218956681,5.03278503728312,3.48340489332647,3.70300644523249,7.53647670624362,12.0459342777394,7.47968467078526,10.2543606411185,11.0461990966104,9.40856462904405,3.5111105032938,4.94247935476367,3.37721805983729,3.88673531961374,6.19711047017394,5.13305909657271,10.1922095882658,42.6640021891999,4.32982082022428,3.54703811665138,4.54972000513305,6.16592950482924,2.33044095282455,4.45326417194474,5.37804512975021,4.56698217468212,4.38169444786511,3.46662073271032,4.46837087115678,5.27799683584637,8.15743393523434,3.18118585223806,1.76922110389975,5.01477234836968,3.09178125844551,3.39412677194655,5.59175283654366,2.34224637609238,3.97948742945565,10.2182822083437,1.1981512450592,0.599902730993408,2.1601938602421,3.74476598512057,4.11750542536764,4.02093926761166,5.04090528557602,5.11430914660661,4.77912502486988,5.67844420737152,7.12875546952214,6.59356944233493,22.2396027421634,3.57751155007006,3.6433724029557,3.67843367093557,3.96136685571768,6.63101198477146,2.72145996605311,3.45907044769094,4.59138450342671,4.9153640440413,3.66465587985832,6.61871280587367,4.75068035242662,4.82230611340665,4.44875598760957,5.57203466435466,6.79081050146213,3.98068533636986,0,0.772043721344145,2.27330799516474,2.27838349789052,1.87620847984877,4.50155153652537,3.78791576936336,2.16440654922144,3.23960937063494,2.32533944750408,3.75582761959467,2.45207218971056,2.63295759861569,3.447516745661,2.51313309592153,3.50879969820798,2.63460138349261,4.2946054003319,5.04695876553905,3.60166143327496,10.2429822724977,7.40461586657924,5.54549451391608,4.87697010906921,4.51036114627327,4.84040459096022,4.89231696458715,7.22857379227725,8.0669940462567,5.59976446061637,7.28872105520782,7.95825888164603,8.77338392036041,10.7858329038507,9.29393614461185,9.35963984295526,3.60369011810855,5.25543158004753,4.50830942692322,3.86937522906097,3.68509725618489,3.50679099451593,4.42655759869801,5.16635517928608,5.02395929092399,3.94870924549762,8.30067355844017,2.50267658574141,2.16214894624523,2.69834534861824,2.43432145666204,3.37648023653384,4.32863948028414,4.89083433666378,8.91743747262695,7.4131581560782,11.5014565221884,11.5363693777236,10.2972432127805,7.82994521636046,5.74071723270119,8.20153986317724,6.28160846566456,5.11626811780309,5.21487924614483,5.43184274480602,4.45911471748154,5.52770649557992,1.6663054862021,6.24427673144956,3.78324345854858,5.09368786192182,4.30527875375215,4.7520361267564,4.66249451037918,3.90552458170081,3.01582567878545,4.35124547054968,6.88469982226651,4.69092468718045,4.0137647496948,7.3843362553088,4.26230857979356,4.03953483526997,4.10160685241134,5.46614242015294,4.52389135238878,4.06246956519338,3.34198011123591,2.54768877709949,6.8817819284732,3.50707029493574,4.74345333535828,3.85585579706168,4.25820255624806,3.02711526234334,7.4928001302645,5.1140738121486,23.8941249011933,4.61283208694465,6.04647113929502,7.92141334974772,7.38254732201932,8.9156192903739,8.5281336745513,5.08947221268508,8.19943970284859,14.2216541071117,10.5418608574999,17.5330423521918,16.000661470428,2.70091641046965,4.52755393239641,5.5727629108214,4.78818630834139,7.84822797449111,8.55654907131029,9.74287837166718,3.52007562095566,8.68511490541663,6.61585194164886,6.10079135883476,5.16686165426898,6.03129249281559,5.84924485615369,4.92422699235184,9.61886760878507,3.33765543618917,2.22132145037209,3.714963623338,2.40752885580625,1.31857919903284,0.956859594047176,2.51655990527175,2.20971958992012,3.63873776041511,1.79659965945751,6.68269432610579,5.69404788446044,5.69294507955176,5.40026704109006,7.94535524854981,8.95286511359328,7.28267470478032,7.19085064810423,11.5172614472973,10.1099679167598,9.94142900939081,3.94585057078933,5.23307911153926,4.63283773279873,8.16694991045,5.55387240954244,4.73077151374179,3.40335992072686,4.81756223922615,4.50895181030557,2.41584120826006,4.03242008761012,2.21207784439725,4.05450430580328,4.10843828659309,2.46849563657811,3.22248052201467,2.58285761215644,1.56254084375959,1.32920574457119,1.51449674922221,1.37172251979,1.61321896218945,2.0466154955348,1.53938946624527,1.16876902181569,4.0811469050738,2.88581739386284,3.22969883794113,5.37230772365051,6.95482538515886,8.44571139530319,6.22715522508701,5.14484109789758,5.01572104035363,6.7770221114048,4.60325236507177,9.16632821503035,8.76451229952807,8.22099023724771,6.0431511791176,4.05013500139084,6.30449684513909,6.79713613476307,5.1776031175182,3.94391920819871,3.19219898720825,4.26834014385335,3.64660075602441,5.03071590307158,5.1476182366004,2.889207461421,3.91466608753899,5.13470735346904,3.28506375292937,3.54871019846336,6.41329560712659,5.52484894072306,5.89031402124797,6.20303064720623,5.71552429539688,6.60540657885676,6.75182271622968,5.35711671044299,5.88795680537589,4.80016953339582,5.50174999093946,5.00715998889374,2.47088908274958,5.45834406408918,6.09225176820071,4.57319932181931,4.99832451731901,4.88894809845102,4.48913817326191,6.16902094245706,6.30428687203606,5.32000356120596,5.26785260032284,4.62975866354739,4.99621155875892,3.74290573512653,7.52048689169044,2.67803664896381,4.41182838239031,3.94175320554716 | |phase1_expression=5.60520964866779,21.6364752736404,13.1949779422965,18.7527811010235,13.5241847085514,15.277013743982,12.1478573109673,2.58246646883153,4.36445038670167,2.80877431586392,2.56826952338257,2.39316476986009,3.59521532855532,2.44777126773193,2.99798785634096,2.02475267389826,0.699561878128147,1.41957974411207,2.87940310572051,2.54633791078818,3.74190476664707,1.09220046320974,0.783599367416806,6.07971206614945,8.48814339948529,15.5042630311055,21.1073378117947,14.2211013572687,15.0118501370535,12.0974462284767,11.0865255327652,1.27006134691926,2.46025915033828,0,9.53210345179206,6.64938581433969,7.9626048942324,3.34825304589526,3.906676722619,4.18818995179039,1.17646297606203,0,2.42755176515577,4.28049181116963,5.27160042341476,5.32285581268876,3.9119567217402,2.18025156380447,2.19686182734472,4.47188767870852,2.79972843250725,2.87505128729943,4.02678254538567,4.35217285206807,3.6970317905671,8.7468208252222,5.73066879877513,4.12537673821954,2.42779753031517,3.70293685490423,3.1691570175309,3.04960078862219,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.49800055259202,1.15265491596466,4.04389488003063,2.70011876663381,2.52389953621658,2.28520787523043,4.19650227808066,2.9397791811589,2.30029130443767,2.75765635983006,4.40463523997555,7.78892762319645,6.29786786350598,3.16527090552465,3.93396867490361,0.52091337055676,3.35019598801657,4.50210088025344,5.95913166329559,5.00868595305235,5.26775218956681,5.03278503728312,3.48340489332647,3.70300644523249,7.53647670624362,12.0459342777394,7.47968467078526,10.2543606411185,11.0461990966104,9.40856462904405,3.5111105032938,4.94247935476367,3.37721805983729,3.88673531961374,6.19711047017394,5.13305909657271,10.1922095882658,42.6640021891999,4.32982082022428,3.54703811665138,4.54972000513305,6.16592950482924,2.33044095282455,4.45326417194474,5.37804512975021,4.56698217468212,4.38169444786511,3.46662073271032,4.46837087115678,5.27799683584637,8.15743393523434,3.18118585223806,1.76922110389975,5.01477234836968,3.09178125844551,3.39412677194655,5.59175283654366,2.34224637609238,3.97948742945565,10.2182822083437,1.1981512450592,0.599902730993408,2.1601938602421,3.74476598512057,4.11750542536764,4.02093926761166,5.04090528557602,5.11430914660661,4.77912502486988,5.67844420737152,7.12875546952214,6.59356944233493,22.2396027421634,3.57751155007006,3.6433724029557,3.67843367093557,3.96136685571768,6.63101198477146,2.72145996605311,3.45907044769094,4.59138450342671,4.9153640440413,3.66465587985832,6.61871280587367,4.75068035242662,4.82230611340665,4.44875598760957,5.57203466435466,6.79081050146213,3.98068533636986,0,0.772043721344145,2.27330799516474,2.27838349789052,1.87620847984877,4.50155153652537,3.78791576936336,2.16440654922144,3.23960937063494,2.32533944750408,3.75582761959467,2.45207218971056,2.63295759861569,3.447516745661,2.51313309592153,3.50879969820798,2.63460138349261,4.2946054003319,5.04695876553905,3.60166143327496,10.2429822724977,7.40461586657924,5.54549451391608,4.87697010906921,4.51036114627327,4.84040459096022,4.89231696458715,7.22857379227725,8.0669940462567,5.59976446061637,7.28872105520782,7.95825888164603,8.77338392036041,10.7858329038507,9.29393614461185,9.35963984295526,3.60369011810855,5.25543158004753,4.50830942692322,3.86937522906097,3.68509725618489,3.50679099451593,4.42655759869801,5.16635517928608,5.02395929092399,3.94870924549762,8.30067355844017,2.50267658574141,2.16214894624523,2.69834534861824,2.43432145666204,3.37648023653384,4.32863948028414,4.89083433666378,8.91743747262695,7.4131581560782,11.5014565221884,11.5363693777236,10.2972432127805,7.82994521636046,5.74071723270119,8.20153986317724,6.28160846566456,5.11626811780309,5.21487924614483,5.43184274480602,4.45911471748154,5.52770649557992,1.6663054862021,6.24427673144956,3.78324345854858,5.09368786192182,4.30527875375215,4.7520361267564,4.66249451037918,3.90552458170081,3.01582567878545,4.35124547054968,6.88469982226651,4.69092468718045,4.0137647496948,7.3843362553088,4.26230857979356,4.03953483526997,4.10160685241134,5.46614242015294,4.52389135238878,4.06246956519338,3.34198011123591,2.54768877709949,6.8817819284732,3.50707029493574,4.74345333535828,3.85585579706168,4.25820255624806,3.02711526234334,7.4928001302645,5.1140738121486,23.8941249011933,4.61283208694465,6.04647113929502,7.92141334974772,7.38254732201932,8.9156192903739,8.5281336745513,5.08947221268508,8.19943970284859,14.2216541071117,10.5418608574999,17.5330423521918,16.000661470428,2.70091641046965,4.52755393239641,5.5727629108214,4.78818630834139,7.84822797449111,8.55654907131029,9.74287837166718,3.52007562095566,8.68511490541663,6.61585194164886,6.10079135883476,5.16686165426898,6.03129249281559,5.84924485615369,4.92422699235184,9.61886760878507,3.33765543618917,2.22132145037209,3.714963623338,2.40752885580625,1.31857919903284,0.956859594047176,2.51655990527175,2.20971958992012,3.63873776041511,1.79659965945751,6.68269432610579,5.69404788446044,5.69294507955176,5.40026704109006,7.94535524854981,8.95286511359328,7.28267470478032,7.19085064810423,11.5172614472973,10.1099679167598,9.94142900939081,3.94585057078933,5.23307911153926,4.63283773279873,8.16694991045,5.55387240954244,4.73077151374179,3.40335992072686,4.81756223922615,4.50895181030557,2.41584120826006,4.03242008761012,2.21207784439725,4.05450430580328,4.10843828659309,2.46849563657811,3.22248052201467,2.58285761215644,1.56254084375959,1.32920574457119,1.51449674922221,1.37172251979,1.61321896218945,2.0466154955348,1.53938946624527,1.16876902181569,4.0811469050738,2.88581739386284,3.22969883794113,5.37230772365051,6.95482538515886,8.44571139530319,6.22715522508701,5.14484109789758,5.01572104035363,6.7770221114048,4.60325236507177,9.16632821503035,8.76451229952807,8.22099023724771,6.0431511791176,4.05013500139084,6.30449684513909,6.79713613476307,5.1776031175182,3.94391920819871,3.19219898720825,4.26834014385335,3.64660075602441,5.03071590307158,5.1476182366004,2.889207461421,3.91466608753899,5.13470735346904,3.28506375292937,3.54871019846336,6.41329560712659,5.52484894072306,5.89031402124797,6.20303064720623,5.71552429539688,6.60540657885676,6.75182271622968,5.35711671044299,5.88795680537589,4.80016953339582,5.50174999093946,5.00715998889374,2.47088908274958,5.45834406408918,6.09225176820071,4.57319932181931,4.99832451731901,4.88894809845102,4.48913817326191,6.16902094245706,6.30428687203606,5.32000356120596,5.26785260032284,4.62975866354739,4.99621155875892,3.74290573512653,7.52048689169044,2.67803664896381,4.41182838239031,3.94175320554716 | ||
|short_description=p4@Pdxdc1 | |short_description=p4@Pdxdc1 | ||
}} | }} |
Latest revision as of 15:38, 1 October 2015
Short description: | p4@Pdxdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pdxdc1_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENSMUST00000115804_5end |
EntrezGene: | Pdxdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.50e-10 | 25 |
endodermal cell | 7.66e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.31e-12 | 31 |
gastrointestinal system | 3.96e-10 | 47 |
mucosa | 4.89e-09 | 15 |
intestinal mucosa | 1.42e-08 | 13 |
wall of intestine | 1.42e-08 | 13 |
gastrointestinal system mucosa | 1.42e-08 | 13 |