FFCP PHASE1:Mm9::chr6:6167128..6167149,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50799 | |EntrezGene=50799 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QXX4,Q8C140 | |UniProt=Q9QXX4,Q8C140 | ||
|association_with_transcript=23bp_to_ENSMUST00000015256,NM_001177572,NM_015829,uc009awp.2,uc009awq.2_5end | |association_with_transcript=23bp_to_ENSMUST00000015256,NM_001177572,NM_015829,uc009awp.2,uc009awq.2_5end | ||
|cluster_id=chr6:6167128..6167149,- | |||
|description=CAGE_peak_2_at_Slc25a13_5end | |description=CAGE_peak_2_at_Slc25a13_5end | ||
|id=chr6:6167128..6167149,- | |id=chr6:6167128..6167149,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!5.47e-13!23;UBERON:0009856!5.47e-13!23;UBERON:0002107!2.31e-12!22;UBERON:0007499!2.31e-12!22;UBERON:0006925!2.31e-12!22;UBERON:0009497!2.31e-12!22;UBERON:0000015!2.31e-12!22;UBERON:0002423!2.31e-12!22;UBERON:0006235!2.31e-12!22;UBERON:0008835!2.31e-12!22;UBERON:0003894!2.31e-12!22;UBERON:0004161!2.31e-12!22;UBERON:0008836!2.31e-12!22;UBERON:0004119!2.08e-11!130;UBERON:0000925!2.08e-11!130;UBERON:0006595!2.08e-11!130;UBERON:0001007!4.09e-11!128;UBERON:0001555!4.09e-11!128;UBERON:0007026!4.09e-11!128;UBERON:0005172!5.43e-11!49;UBERON:0005173!5.43e-11!49;UBERON:0002417!5.43e-11!49;UBERON:0000916!5.43e-11!49;UBERON:0003914!7.22e-11!47;UBERON:0004921!1.34e-10!126;UBERON:0004185!1.34e-10!126;UBERON:0002365!2.33e-10!25;UBERON:0002330!2.33e-10!25;UBERON:0000160!3.36e-10!43;UBERON:0005409!1.39e-08!59;UBERON:0009569!1.31e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.77e-13,23;UBERON:0009856,3.77e-13,23;UBERON:0002107,1.63e-12,22;UBERON:0007499,1.63e-12,22;UBERON:0006925,1.63e-12,22;UBERON:0009497,1.63e-12,22;UBERON:0000015,1.63e-12,22;UBERON:0002423,1.63e-12,22;UBERON:0006235,1.63e-12,22;UBERON:0008835,1.63e-12,22;UBERON:0003894,1.63e-12,22;UBERON:0004161,1.63e-12,22;UBERON:0008836,1.63e-12,22;UBERON:0005172,4.88e-11,49;UBERON:0005173,4.88e-11,49;UBERON:0002417,4.88e-11,49;UBERON:0000916,4.88e-11,49;UBERON:0003914,5.31e-11,47;UBERON:0000160,7.52e-11,31;UBERON:0004119,8.52e-11,118;UBERON:0000925,8.52e-11,118;UBERON:0006595,8.52e-11,118;UBERON:0001007,1.63e-10,116;UBERON:0001555,1.63e-10,116;UBERON:0007026,1.63e-10,116;UBERON:0002365,2.56e-10,25;UBERON:0002330,2.56e-10,25;UBERON:0004921,5.20e-10,114;UBERON:0005409,3.18e-08,47;UBERON:0005177,9.08e-08,79;UBERON:0009569,2.40e-07,66;UBERON:0003929,7.16e-07,55 | |||
|phase1_expression=0.320297694209588,8.02643437570531,6.82498859084304,12.40103266358,10.0179145989269,4.36486106970913,4.90586545250604,0,0,0,0.171217968225505,0.0797721589953364,0,0,2.6648780945253,1.21485160433896,0.699561878128147,0.157731082679119,0.274228867211478,0,3.40173160604279,0.794327609607082,0.261199789138935,4.95976510659561,5.73523202667925,5.7423196411502,3.87685796543167,9.69620547086501,8.93110071444957,7.56090389279792,5.54326276638262,0.635030673459631,1.23012957516914,0,2.88851619751275,3.82339684324532,5.71674197534634,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.917733760808408,0,1.96222640742402,0.219686182734472,0.194429899074283,0.699932108126813,1.43752564364972,0,0.725362142011344,0.672187598284928,0,0.573066879877513,1.03134418455488,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0,0.768436610643109,1.55534418462716,1.21505344498522,0.841299845405528,1.14260393761521,1.32521124570968,1.34739879136449,1.43768206527355,0.919218786610021,2.20231761998777,1.27687338085188,3.22573719838111,0.395658863190582,0.457438218012048,1.04182674111352,1.11673199600552,2.25105044012672,2.13917546887534,1.76777151284201,0.854230084794618,0.745597783301202,1.21161909333094,1.28471652181535,2.6087803983151,10.3250865237766,10.879541339324,18.3499085156858,34.4381501247265,39.8743929516629,8.56710962803686,1.53387290320252,2.59786004602869,1.06001872353102,1.26759077799012,2.56652954828636,0,14.2213340630666,2.59789249213457,5.32055717497707,8.08839112023653,9.24889425724386,0.517875767294343,3.56261133755579,4.51061849591953,5.48037860961854,7.14908041493781,5.72746034099966,5.64425794251383,3.26733137457156,1.48316980640624,0.144599356919912,0,0.808834249737046,0.441683036920787,0.969750506270444,14.9113408974498,0.878342391034642,0.628340120440365,5.62005521458901,0.359445373517761,1.19980546198682,0.635351135365324,2.39665023047716,1.37250180845588,0.376963056338593,0.521472960576829,0,1.66230435647648,0.973447578406546,1.01839363850316,1.49288364732112,4.80173241023982,1.89397670297827,2.47228841629137,2.06911893990126,1.62055916824814,2.10986744970001,2.31324097114515,2.3060469651273,1.68663104207512,1.29351685369508,4.52692785158969,3.40390944302075,3.16712023495108,1.97276159184817,1.11218899690239,2.089512999133,1.64625709126355,3.98068533636986,1.40442637462647,0.257347907114715,0,5.38527008592305,7.27030785941398,7.38254451990161,4.7348947117042,7.67380503814875,6.78775296704464,7.90615412151387,6.43856163359086,8.17357396570186,8.22799249567402,6.56669856316381,11.9981838127866,9.9415991449226,13.3925570327541,11.2733391758712,0.841159794256509,0.308713837137853,17.1817767151575,5.02456076660734,3.19932375802851,3.0190767341857,3.60828891701861,10.6892268050372,12.6755484991576,9.3210556795154,6.64340686162316,8.56434564564857,10.8074139784116,9.15199771389294,9.94316844307513,4.49409704327111,7.3486936957396,8.16479220342906,3.03468641524931,4.11294645395024,2.25415471346161,7.127796474586,7.95205197387266,6.94344616914154,7.52514791778662,10.1851002105925,9.73392112616524,14.3140710149289,17.1942523710546,6.17326891149548,3.73462090715086,6.07127703439105,6.49152388443209,8.20002343158217,11.9674150337267,29.9203982948843,34.2105328495325,38.9877206727076,23.0029130443767,30.1434167611488,35.8843324081745,25.5104666726583,24.7568430660239,18.8152973331713,1.29327233116623,2.65287976478679,2.60743962307241,2.54617628662782,2.11221223459652,2.34508760418542,2.61848004974615,0.390267295715598,0.630540576424764,1.10732344824387,0.956728611944923,0.983179888294428,1.72684981865896,2.02508682014116,3.01582567878545,2.71952841909355,2.45882136509518,0.827810238914197,4.0137647496948,2.46144541843627,1.3114795630134,0.252470927204373,2.52406575533005,1.95219372148319,1.50796378412959,1.43381278771531,0.222798674082394,0.566153061577665,1.21443210502468,0.876767573733936,1.58115111178609,0.963963949265421,4.11626247103979,2.31485284767432,2.11753047159649,3.62934270539578,1.32745138339963,2.91336763385978,2.11626489875326,6.97838795096823,7.38254732201932,6.45613810682248,5.68542244970086,5.81653967164009,4.9909632973861,2.52829406348653,1.05418608574999,1.03135543248187,4.08527526904546,2.16073312837572,2.32845630808958,1.71469628025274,3.90148514013002,1.78368817602071,1.64549020602121,1.2178597964584,4.4587624532105,3.38931313382112,7.05690873775878,2.96795255294664,2.09903754704677,1.44751019827574,2.86493625607528,3.11867709515616,3.78925087618806,3.15223013417866,0.683483523191411,0.619160603889667,1.48155621895769,2.44878994106098,1.36694227721025,0.228778173206523,1.5298058699447,0.69975726161829,0.552799895217695,0.954670618015114,4.58687190692646,2.64315307264903,3.99619761040665,2.92723614420256,4.14888871117737,5.52943820177765,6.61227645802687,5.49687478166462,9.0730481304255,1.86401793926078,2.81846469342095,2.69129782879162,2.64733584731356,3.50012139019286,4.77891346867605,5.23763989021412,4.22486059124714,3.3853140059427,1.99232754408851,1.44950472495604,2.88030006257865,1.58005560314089,4.45995473638361,5.03283690107653,3.37794139742267,3.40150721768215,2.38417625737518,2.88469078847925,2.06765338044408,2.3222283488074,1.752756553065,1.20991422164209,1.07203668813728,1.73181314952593,1.28564592399726,3.17422537061296,8.21348027484039,10.5862350799181,7.89057696911169,2.31827512838629,2.43987218086537,4.02933573387983,5.57357785605571,2.50786052017682,1.12950368523413,0.920650473014354,0,0.171853182343688,0.685082519770642,1.5107877947794,0,0.45032120322422,0.906284817968409,0,4.8780053364563,3.19219898720825,2.21953687480374,3.40349403895612,2.72497111416377,4.22840069435032,4.00044110042907,1.44224540067226,3.85103051510178,3.03236654116557,5.0695859978048,2.64076877940507,2.99652823903624,3.07320731543373,2.64203157195821,3.81034953026459,4.28772005995965,2.12200142510076,3.70877310722976,3.97437084362873,5.82877729055206,3.19456451086807,2.38436189947321,3.92435324907287,3.95259397744389,2.96151127620868,4.39027134894654,5.5244639401947,2.71608227691724,4.48913817326191,4.03359061622192,3.25064791839359,4.09231043169689,3.25367366490529,5.20847849649082,1.24905288968973,5.14649538579898,4.51229213501426,0.765153328275374,1.10295709559758,0.695603506861264 | |phase1_expression=0.320297694209588,8.02643437570531,6.82498859084304,12.40103266358,10.0179145989269,4.36486106970913,4.90586545250604,0,0,0,0.171217968225505,0.0797721589953364,0,0,2.6648780945253,1.21485160433896,0.699561878128147,0.157731082679119,0.274228867211478,0,3.40173160604279,0.794327609607082,0.261199789138935,4.95976510659561,5.73523202667925,5.7423196411502,3.87685796543167,9.69620547086501,8.93110071444957,7.56090389279792,5.54326276638262,0.635030673459631,1.23012957516914,0,2.88851619751275,3.82339684324532,5.71674197534634,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.917733760808408,0,1.96222640742402,0.219686182734472,0.194429899074283,0.699932108126813,1.43752564364972,0,0.725362142011344,0.672187598284928,0,0.573066879877513,1.03134418455488,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0,0.768436610643109,1.55534418462716,1.21505344498522,0.841299845405528,1.14260393761521,1.32521124570968,1.34739879136449,1.43768206527355,0.919218786610021,2.20231761998777,1.27687338085188,3.22573719838111,0.395658863190582,0.457438218012048,1.04182674111352,1.11673199600552,2.25105044012672,2.13917546887534,1.76777151284201,0.854230084794618,0.745597783301202,1.21161909333094,1.28471652181535,2.6087803983151,10.3250865237766,10.879541339324,18.3499085156858,34.4381501247265,39.8743929516629,8.56710962803686,1.53387290320252,2.59786004602869,1.06001872353102,1.26759077799012,2.56652954828636,0,14.2213340630666,2.59789249213457,5.32055717497707,8.08839112023653,9.24889425724386,0.517875767294343,3.56261133755579,4.51061849591953,5.48037860961854,7.14908041493781,5.72746034099966,5.64425794251383,3.26733137457156,1.48316980640624,0.144599356919912,0,0.808834249737046,0.441683036920787,0.969750506270444,14.9113408974498,0.878342391034642,0.628340120440365,5.62005521458901,0.359445373517761,1.19980546198682,0.635351135365324,2.39665023047716,1.37250180845588,0.376963056338593,0.521472960576829,0,1.66230435647648,0.973447578406546,1.01839363850316,1.49288364732112,4.80173241023982,1.89397670297827,2.47228841629137,2.06911893990126,1.62055916824814,2.10986744970001,2.31324097114515,2.3060469651273,1.68663104207512,1.29351685369508,4.52692785158969,3.40390944302075,3.16712023495108,1.97276159184817,1.11218899690239,2.089512999133,1.64625709126355,3.98068533636986,1.40442637462647,0.257347907114715,0,5.38527008592305,7.27030785941398,7.38254451990161,4.7348947117042,7.67380503814875,6.78775296704464,7.90615412151387,6.43856163359086,8.17357396570186,8.22799249567402,6.56669856316381,11.9981838127866,9.9415991449226,13.3925570327541,11.2733391758712,0.841159794256509,0.308713837137853,17.1817767151575,5.02456076660734,3.19932375802851,3.0190767341857,3.60828891701861,10.6892268050372,12.6755484991576,9.3210556795154,6.64340686162316,8.56434564564857,10.8074139784116,9.15199771389294,9.94316844307513,4.49409704327111,7.3486936957396,8.16479220342906,3.03468641524931,4.11294645395024,2.25415471346161,7.127796474586,7.95205197387266,6.94344616914154,7.52514791778662,10.1851002105925,9.73392112616524,14.3140710149289,17.1942523710546,6.17326891149548,3.73462090715086,6.07127703439105,6.49152388443209,8.20002343158217,11.9674150337267,29.9203982948843,34.2105328495325,38.9877206727076,23.0029130443767,30.1434167611488,35.8843324081745,25.5104666726583,24.7568430660239,18.8152973331713,1.29327233116623,2.65287976478679,2.60743962307241,2.54617628662782,2.11221223459652,2.34508760418542,2.61848004974615,0.390267295715598,0.630540576424764,1.10732344824387,0.956728611944923,0.983179888294428,1.72684981865896,2.02508682014116,3.01582567878545,2.71952841909355,2.45882136509518,0.827810238914197,4.0137647496948,2.46144541843627,1.3114795630134,0.252470927204373,2.52406575533005,1.95219372148319,1.50796378412959,1.43381278771531,0.222798674082394,0.566153061577665,1.21443210502468,0.876767573733936,1.58115111178609,0.963963949265421,4.11626247103979,2.31485284767432,2.11753047159649,3.62934270539578,1.32745138339963,2.91336763385978,2.11626489875326,6.97838795096823,7.38254732201932,6.45613810682248,5.68542244970086,5.81653967164009,4.9909632973861,2.52829406348653,1.05418608574999,1.03135543248187,4.08527526904546,2.16073312837572,2.32845630808958,1.71469628025274,3.90148514013002,1.78368817602071,1.64549020602121,1.2178597964584,4.4587624532105,3.38931313382112,7.05690873775878,2.96795255294664,2.09903754704677,1.44751019827574,2.86493625607528,3.11867709515616,3.78925087618806,3.15223013417866,0.683483523191411,0.619160603889667,1.48155621895769,2.44878994106098,1.36694227721025,0.228778173206523,1.5298058699447,0.69975726161829,0.552799895217695,0.954670618015114,4.58687190692646,2.64315307264903,3.99619761040665,2.92723614420256,4.14888871117737,5.52943820177765,6.61227645802687,5.49687478166462,9.0730481304255,1.86401793926078,2.81846469342095,2.69129782879162,2.64733584731356,3.50012139019286,4.77891346867605,5.23763989021412,4.22486059124714,3.3853140059427,1.99232754408851,1.44950472495604,2.88030006257865,1.58005560314089,4.45995473638361,5.03283690107653,3.37794139742267,3.40150721768215,2.38417625737518,2.88469078847925,2.06765338044408,2.3222283488074,1.752756553065,1.20991422164209,1.07203668813728,1.73181314952593,1.28564592399726,3.17422537061296,8.21348027484039,10.5862350799181,7.89057696911169,2.31827512838629,2.43987218086537,4.02933573387983,5.57357785605571,2.50786052017682,1.12950368523413,0.920650473014354,0,0.171853182343688,0.685082519770642,1.5107877947794,0,0.45032120322422,0.906284817968409,0,4.8780053364563,3.19219898720825,2.21953687480374,3.40349403895612,2.72497111416377,4.22840069435032,4.00044110042907,1.44224540067226,3.85103051510178,3.03236654116557,5.0695859978048,2.64076877940507,2.99652823903624,3.07320731543373,2.64203157195821,3.81034953026459,4.28772005995965,2.12200142510076,3.70877310722976,3.97437084362873,5.82877729055206,3.19456451086807,2.38436189947321,3.92435324907287,3.95259397744389,2.96151127620868,4.39027134894654,5.5244639401947,2.71608227691724,4.48913817326191,4.03359061622192,3.25064791839359,4.09231043169689,3.25367366490529,5.20847849649082,1.24905288968973,5.14649538579898,4.51229213501426,0.765153328275374,1.10295709559758,0.695603506861264 | ||
|short_description=p2@Slc25a13 | |short_description=p2@Slc25a13 | ||
}} | }} |
Latest revision as of 15:10, 1 October 2015
Short description: | p2@Slc25a13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc25a13_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 23bp_to_ENSMUST00000015256, NM_001177572, NM_015829, uc009awp.2, uc009awq.2_5end |
EntrezGene: | Slc25a13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.77e-13 | 23 |
sac | 3.77e-13 | 23 |
liver | 1.63e-12 | 22 |
epithelial sac | 1.63e-12 | 22 |
digestive gland | 1.63e-12 | 22 |
epithelium of foregut-midgut junction | 1.63e-12 | 22 |
anatomical boundary | 1.63e-12 | 22 |
hepatobiliary system | 1.63e-12 | 22 |
foregut-midgut junction | 1.63e-12 | 22 |
hepatic diverticulum | 1.63e-12 | 22 |
liver primordium | 1.63e-12 | 22 |
septum transversum | 1.63e-12 | 22 |
liver bud | 1.63e-12 | 22 |
abdomen element | 4.88e-11 | 49 |
abdominal segment element | 4.88e-11 | 49 |
abdominal segment of trunk | 4.88e-11 | 49 |
abdomen | 4.88e-11 | 49 |
epithelial tube | 5.31e-11 | 47 |
intestine | 7.52e-11 | 31 |
endoderm-derived structure | 8.52e-11 | 118 |
endoderm | 8.52e-11 | 118 |
presumptive endoderm | 8.52e-11 | 118 |
digestive system | 1.63e-10 | 116 |
digestive tract | 1.63e-10 | 116 |
primitive gut | 1.63e-10 | 116 |
exocrine gland | 2.56e-10 | 25 |
exocrine system | 2.56e-10 | 25 |
subdivision of digestive tract | 5.20e-10 | 114 |
gastrointestinal system | 3.18e-08 | 47 |
trunk region element | 9.08e-08 | 79 |
subdivision of trunk | 2.40e-07 | 66 |
gut epithelium | 7.16e-07 | 55 |