FFCP PHASE1:Mm9::chr1:74901528..74901539,+: Difference between revisions
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{{FFCP|EntrezGene=12570|HGNC=|MCL_coexpression_id=2|UniProt=O35926|association_with_transcript=20bp_to_ENSMUST00000160379_5end|description=CAGE_peak_2_at_Cdk5r2_5end|id=chr1:74901528..74901539,+|ontology_enrichment_celltype=CL:0000117!3.64e-15!23;CL:0000337!3.64e-15!23;CL:0000540!1.24e-12!33;CL:0000047!1.24e-12!33;CL:0000031!1.24e-12!33;CL:0000404!1.24e-12!33;CL:0000393!4.19e-09!39;CL:0000211!4.19e-09!39;CL:0000221!1.03e-08!44;CL:0000133!1.03e-08!44;CL:0002319!1.47e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-18,23;CL:0000337,2.53e-18,23;CL:0000540,5.10e-11,33;CL:0000047,5.10e-11,33;CL:0000031,5.10e-11,33;CL:0000404,5.10e-11,33;CL:0000393,1.72e-08,39;CL:0000211,1.72e-08,39;CL:0002319,3.19e-07,43;CL:0000221,6.05e-07,44;CL:0000133,6.05e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.69e-35!71;UBERON:0003075!2.69e-35!71;UBERON:0007284!2.69e-35!71;UBERON:0000073!1.15e-30!75;UBERON:0001016!1.15e-30!75;UBERON:0001017!3.30e-30!73;UBERON:0005743!3.30e-30!73;UBERON:0001049!3.53e-30!52;UBERON:0005068!3.53e-30!52;UBERON:0006241!3.53e-30!52;UBERON:0007135!3.53e-30!52;UBERON:0004121!8.39e-30!102;UBERON:0000924!8.39e-30!102;UBERON:0006601!8.39e-30!102;UBERON:0000033!9.59e-30!63;UBERON:0000955!1.15e-28!50;UBERON:0006238!1.15e-28!50;UBERON:0002616!9.07e-28!49;UBERON:0003056!1.47e-27!49;UBERON:0003080!3.48e-24!40;UBERON:0002780!2.48e-23!39;UBERON:0001890!2.48e-23!39;UBERON:0006240!2.48e-23!39;UBERON:0002020!7.60e-22!34;UBERON:0002791!4.08e-18!29;UBERON:0003528!4.08e-18!29;UBERON:0001893!4.08e-18!29;UBERON:0007811!2.45e-16!86;UBERON:0000153!3.61e-13!94;UBERON:0000956!1.28e-12!21;UBERON:0001869!1.28e-12!21;UBERON:0000203!1.28e-12!21;UBERON:0002619!1.10e-10!17;UBERON:0002021!2.73e-10!10;UBERON:0000411!2.73e-10!10;UBERON:0001950!2.73e-10!10;UBERON:0002420!9.51e-07!8;UBERON:0007245!9.51e-07!8;UBERON:0010009!9.51e-07!8;UBERON:0010011!9.51e-07!8;UBERON:0000454!9.51e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.01e-44,54;UBERON:0001049,3.07e-41,52;UBERON:0005068,3.07e-41,52;UBERON:0006241,3.07e-41,52;UBERON:0007135,3.07e-41,52;UBERON:0002346,4.62e-38,64;UBERON:0003075,4.62e-38,64;UBERON:0007284,4.62e-38,64;UBERON:0001017,1.06e-37,73;UBERON:0001016,2.66e-36,75;UBERON:0000955,3.65e-35,47;UBERON:0006238,3.65e-35,47;UBERON:0002616,8.24e-34,46;UBERON:0010371,1.23e-31,73;UBERON:0004121,4.79e-31,95;UBERON:0000924,4.79e-31,95;UBERON:0006601,4.79e-31,95;UBERON:0003080,6.51e-31,40;UBERON:0003056,3.52e-30,49;UBERON:0002020,1.20e-29,34;UBERON:0002780,1.32e-29,39;UBERON:0001890,1.32e-29,39;UBERON:0006240,1.32e-29,39;UBERON:0003528,8.26e-24,29;UBERON:0002791,8.26e-24,29;UBERON:0001893,8.26e-24,29;UBERON:0010314,2.39e-23,92;UBERON:0002021,1.57e-15,10;UBERON:0000411,1.57e-15,10;UBERON:0001950,1.57e-15,10;UBERON:0000956,2.84e-15,21;UBERON:0001869,2.84e-15,21;UBERON:0000203,2.84e-15,21;UBERON:0002619,3.79e-15,17;UBERON:0000025,7.23e-12,114;UBERON:0004111,2.62e-10,122;UBERON:0003076,3.50e-10,12;UBERON:0003057,3.50e-10,12;UBERON:0002420,7.10e-10,8;UBERON:0007245,7.10e-10,8;UBERON:0010009,7.10e-10,8;UBERON:0010011,7.10e-10,8;UBERON:0000454,7.10e-10,8;UBERON:0002240,3.55e-08,6;UBERON:0005174,3.55e-08,6;UBERON:0001137,3.55e-08,6;UBERON:0001948,4.88e-07,5;UBERON:0002315,4.88e-07,5|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,8.99284664762456,2.53532561402472,0,0,0,0,0,0,0,0.725827286159344,1.75507719831198,0.630974884054146,7.42692559449889,5.30084498283872,0.979926393719632,1.24599112323707,2.75765635983006,3.30347642998166,9.44886301830389,9.67721159514334,3.16527090552465,4.94033275453012,5.2091337055676,5.862842979029,6.19038871034848,6.26472815884921,7.66034322231536,6.54909731675874,8.38797506213853,0.151452386666368,0.604572480854284,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.520455980298408,1.21786191324856,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0.433798070759735,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0,0,0,13.0317856282196,19.6725259212009,5.27748278874031,35.1125126788398,44.7502050328078,14.7529511637288,19.4689515681309,0,0,0,3.78795340595653,0.130120442962704,0.229902104433473,0.720248519221397,0.30140963567143,0.816437989815934,1.15302348256365,1.59292931751539,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5569652164638,5.45394445610208,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66973185934077,12.5416504653657,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0,14.7807805554031,0,0,0,0,0,0,0,0.377210159511796,0,1.22974059177571,0.516856586336442,0,0,0.316036757935816,0,0,4.42571487479924,0.36012218806262,0.388076051348264,1.07168517515796,1.24138163549592,3.21063871683727,1.31639216481697,2.74018454203139,0,0,0.441056796109924,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,29.9318476587045,34.5243927380383,28.6447756719698,41.5884701271724,26.0331357512844,21.9064230243013,19.5756525067224,20.2644541450899,22.6571204492102,23.8169743405837,1.24544817101012,1.19707462020309,0.682934423016537,0.729320151204882,1.46729213839588,0.735374033800057,0.666740183404846,0.412070114477788,0.962757628775446,1.26348605881899,0.760437899670719,1.13175804831646,0.655490552289177,0.832326981263301,0.804096565378586,1.42888107384922,0.695305955669133,1.35036454324594,0,0.735994600671987,0,0.887379030796687,1.1921809497366,0.726732083161643,0.564656282491984,1.01537529470012,0.548783918618318,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,1.28055827088233,0.409231043169689,0.154936841185966,0.578719832943424,2.99772693525535,1.40358965067245,0.859484216193193,0.956441660344217,1.54413993383661,0|short_description=p2@Cdk5r2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12570 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=O35926 | |||
|association_with_transcript=20bp_to_ENSMUST00000160379_5end | |||
|cluster_id=chr1:74901528..74901539,+ | |||
|description=CAGE_peak_2_at_Cdk5r2_5end | |||
|id=chr1:74901528..74901539,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.64e-15!23;CL:0000337!3.64e-15!23;CL:0000540!1.24e-12!33;CL:0000047!1.24e-12!33;CL:0000031!1.24e-12!33;CL:0000404!1.24e-12!33;CL:0000393!4.19e-09!39;CL:0000211!4.19e-09!39;CL:0000221!1.03e-08!44;CL:0000133!1.03e-08!44;CL:0002319!1.47e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-18,23;CL:0000337,2.53e-18,23;CL:0000540,5.10e-11,33;CL:0000047,5.10e-11,33;CL:0000031,5.10e-11,33;CL:0000404,5.10e-11,33;CL:0000393,1.72e-08,39;CL:0000211,1.72e-08,39;CL:0002319,3.19e-07,43;CL:0000221,6.05e-07,44;CL:0000133,6.05e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.69e-35!71;UBERON:0003075!2.69e-35!71;UBERON:0007284!2.69e-35!71;UBERON:0000073!1.15e-30!75;UBERON:0001016!1.15e-30!75;UBERON:0001017!3.30e-30!73;UBERON:0005743!3.30e-30!73;UBERON:0001049!3.53e-30!52;UBERON:0005068!3.53e-30!52;UBERON:0006241!3.53e-30!52;UBERON:0007135!3.53e-30!52;UBERON:0004121!8.39e-30!102;UBERON:0000924!8.39e-30!102;UBERON:0006601!8.39e-30!102;UBERON:0000033!9.59e-30!63;UBERON:0000955!1.15e-28!50;UBERON:0006238!1.15e-28!50;UBERON:0002616!9.07e-28!49;UBERON:0003056!1.47e-27!49;UBERON:0003080!3.48e-24!40;UBERON:0002780!2.48e-23!39;UBERON:0001890!2.48e-23!39;UBERON:0006240!2.48e-23!39;UBERON:0002020!7.60e-22!34;UBERON:0002791!4.08e-18!29;UBERON:0003528!4.08e-18!29;UBERON:0001893!4.08e-18!29;UBERON:0007811!2.45e-16!86;UBERON:0000153!3.61e-13!94;UBERON:0000956!1.28e-12!21;UBERON:0001869!1.28e-12!21;UBERON:0000203!1.28e-12!21;UBERON:0002619!1.10e-10!17;UBERON:0002021!2.73e-10!10;UBERON:0000411!2.73e-10!10;UBERON:0001950!2.73e-10!10;UBERON:0002420!9.51e-07!8;UBERON:0007245!9.51e-07!8;UBERON:0010009!9.51e-07!8;UBERON:0010011!9.51e-07!8;UBERON:0000454!9.51e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.01e-44,54;UBERON:0001049,3.07e-41,52;UBERON:0005068,3.07e-41,52;UBERON:0006241,3.07e-41,52;UBERON:0007135,3.07e-41,52;UBERON:0002346,4.62e-38,64;UBERON:0003075,4.62e-38,64;UBERON:0007284,4.62e-38,64;UBERON:0001017,1.06e-37,73;UBERON:0001016,2.66e-36,75;UBERON:0000955,3.65e-35,47;UBERON:0006238,3.65e-35,47;UBERON:0002616,8.24e-34,46;UBERON:0010371,1.23e-31,73;UBERON:0004121,4.79e-31,95;UBERON:0000924,4.79e-31,95;UBERON:0006601,4.79e-31,95;UBERON:0003080,6.51e-31,40;UBERON:0003056,3.52e-30,49;UBERON:0002020,1.20e-29,34;UBERON:0002780,1.32e-29,39;UBERON:0001890,1.32e-29,39;UBERON:0006240,1.32e-29,39;UBERON:0003528,8.26e-24,29;UBERON:0002791,8.26e-24,29;UBERON:0001893,8.26e-24,29;UBERON:0010314,2.39e-23,92;UBERON:0002021,1.57e-15,10;UBERON:0000411,1.57e-15,10;UBERON:0001950,1.57e-15,10;UBERON:0000956,2.84e-15,21;UBERON:0001869,2.84e-15,21;UBERON:0000203,2.84e-15,21;UBERON:0002619,3.79e-15,17;UBERON:0000025,7.23e-12,114;UBERON:0004111,2.62e-10,122;UBERON:0003076,3.50e-10,12;UBERON:0003057,3.50e-10,12;UBERON:0002420,7.10e-10,8;UBERON:0007245,7.10e-10,8;UBERON:0010009,7.10e-10,8;UBERON:0010011,7.10e-10,8;UBERON:0000454,7.10e-10,8;UBERON:0002240,3.55e-08,6;UBERON:0005174,3.55e-08,6;UBERON:0001137,3.55e-08,6;UBERON:0001948,4.88e-07,5;UBERON:0002315,4.88e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,8.99284664762456,2.53532561402472,0,0,0,0,0,0,0,0.725827286159344,1.75507719831198,0.630974884054146,7.42692559449889,5.30084498283872,0.979926393719632,1.24599112323707,2.75765635983006,3.30347642998166,9.44886301830389,9.67721159514334,3.16527090552465,4.94033275453012,5.2091337055676,5.862842979029,6.19038871034848,6.26472815884921,7.66034322231536,6.54909731675874,8.38797506213853,0.151452386666368,0.604572480854284,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.520455980298408,1.21786191324856,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0.433798070759735,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0,0,0,13.0317856282196,19.6725259212009,5.27748278874031,35.1125126788398,44.7502050328078,14.7529511637288,19.4689515681309,0,0,0,3.78795340595653,0.130120442962704,0.229902104433473,0.720248519221397,0.30140963567143,0.816437989815934,1.15302348256365,1.59292931751539,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5569652164638,5.45394445610208,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66973185934077,12.5416504653657,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0,14.7807805554031,0,0,0,0,0,0,0,0.377210159511796,0,1.22974059177571,0.516856586336442,0,0,0.316036757935816,0,0,4.42571487479924,0.36012218806262,0.388076051348264,1.07168517515796,1.24138163549592,3.21063871683727,1.31639216481697,2.74018454203139,0,0,0.441056796109924,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,29.9318476587045,34.5243927380383,28.6447756719698,41.5884701271724,26.0331357512844,21.9064230243013,19.5756525067224,20.2644541450899,22.6571204492102,23.8169743405837,1.24544817101012,1.19707462020309,0.682934423016537,0.729320151204882,1.46729213839588,0.735374033800057,0.666740183404846,0.412070114477788,0.962757628775446,1.26348605881899,0.760437899670719,1.13175804831646,0.655490552289177,0.832326981263301,0.804096565378586,1.42888107384922,0.695305955669133,1.35036454324594,0,0.735994600671987,0,0.887379030796687,1.1921809497366,0.726732083161643,0.564656282491984,1.01537529470012,0.548783918618318,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,1.28055827088233,0.409231043169689,0.154936841185966,0.578719832943424,2.99772693525535,1.40358965067245,0.859484216193193,0.956441660344217,1.54413993383661,0 | |||
|short_description=p2@Cdk5r2 | |||
}} |
Latest revision as of 14:57, 1 October 2015
Short description: | p2@Cdk5r2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdk5r2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 20bp_to_ENSMUST00000160379_5end |
EntrezGene: | Cdk5r2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.53e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-18 | 23 |
neuron | 5.10e-11 | 33 |
neuronal stem cell | 5.10e-11 | 33 |
neuroblast | 5.10e-11 | 33 |
electrically signaling cell | 5.10e-11 | 33 |
electrically responsive cell | 1.72e-08 | 39 |
electrically active cell | 1.72e-08 | 39 |
neural cell | 3.19e-07 | 43 |
ectodermal cell | 6.05e-07 | 44 |
neurectodermal cell | 6.05e-07 | 44 |