FFCP PHASE1:Mm9::chr8:120197532..120197555,-: Difference between revisions
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{{FFCP|EntrezGene=74032|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=0bp_to_uc009npe.1_5end|description=CAGE_peak_1_at_Sdr42e1_5end|id=chr8:120197532..120197555,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.83e-10!130;UBERON:0000925!6.83e-10!130;UBERON:0006595!6.83e-10!130;UBERON:0002365!7.97e-10!25;UBERON:0002330!7.97e-10!25;UBERON:0009854!1.25e-09!23;UBERON:0009856!1.25e-09!23;UBERON:0001007!3.58e-09!128;UBERON:0001555!3.58e-09!128;UBERON:0007026!3.58e-09!128;UBERON:0002107!5.03e-09!22;UBERON:0007499!5.03e-09!22;UBERON:0006925!5.03e-09!22;UBERON:0009497!5.03e-09!22;UBERON:0000015!5.03e-09!22;UBERON:0002423!5.03e-09!22;UBERON:0006235!5.03e-09!22;UBERON:0008835!5.03e-09!22;UBERON:0003894!5.03e-09!22;UBERON:0004161!5.03e-09!22;UBERON:0008836!5.03e-09!22;UBERON:0004921!9.97e-09!126;UBERON:0004185!9.97e-09!126;UBERON:0007023!7.76e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.88e-11,25;UBERON:0002330,6.88e-11,25;UBERON:0009854,1.18e-10,23;UBERON:0009856,1.18e-10,23;UBERON:0002107,5.93e-10,22;UBERON:0007499,5.93e-10,22;UBERON:0006925,5.93e-10,22;UBERON:0009497,5.93e-10,22;UBERON:0000015,5.93e-10,22;UBERON:0002423,5.93e-10,22;UBERON:0006235,5.93e-10,22;UBERON:0008835,5.93e-10,22;UBERON:0003894,5.93e-10,22;UBERON:0004161,5.93e-10,22;UBERON:0008836,5.93e-10,22;UBERON:0004119,6.38e-10,118;UBERON:0000925,6.38e-10,118;UBERON:0006595,6.38e-10,118;UBERON:0001007,3.94e-09,116;UBERON:0001555,3.94e-09,116;UBERON:0007026,3.94e-09,116;UBERON:0004921,1.20e-08,114;UBERON:0005409,1.62e-08,47;UBERON:0007023,2.17e-08,51;UBERON:0000160,4.59e-08,31|phase1_expression=0.640595388419176,0.348975407639361,0.909998478779072,1.20985684522732,1.50268718983904,2.35030980676646,2.56973904655078,0.258246646883153,0.422366166455,0,0,0.0797721589953364,0.513602189793617,0.174840804837995,0,0,0,0.630924330716475,0.548457734422955,0,0.935476191661768,0.297872853602656,0.522399578277871,2.07990149631429,3.67054849707472,0.57423196411502,0,1.939241094173,8.17100703662408,5.29263272495855,3.76941868114018,0,0,0,8.08784535303569,6.64938581433969,7.9626048942324,0,0,0.523523743973798,0,0,0,0.629484089877886,0.608261587317087,0.367093504323363,0.782391344348039,0.436050312760893,0.659058548203415,1.1665793944457,0.699932108126813,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0,1.19840044207362,0.384218305321555,0,0.135005938331691,0,1.71390590642282,0.441737081903227,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.383062014255563,1.22885226604995,0.263772575460388,0.731901148819277,0,0.558365998002762,0.56276261003168,1.22238598221448,0.883885756421003,0.711858403995515,0.372798891650601,0.227178579999552,0.302286240427142,2.89864488701678,37.858650587181,20.3991400112325,98.2259808780827,113.061096635894,172.042324645377,32.4426610504347,0,0,0,1.26759077799012,0,0,0,0.649473123033642,1.26679932737549,0.505524445014783,41.5629322177378,1.29468941823586,0.148442139064825,0,0,0.461230994512117,0.301445281105245,0.470354828542819,0.502666365318702,31.8881508377342,1.44599356919912,0,0.323533699894818,0.220841518460394,0,39.1422698558057,0.585561594023094,0,5.62005521458901,0.239630249011841,0,0.254140454146129,1.3481157546434,1.83000241127451,0.753926112677186,1.73824320192276,3.06858548796397,2.28566849015516,1.46017136760982,0.203678727700633,5.22509276562391,39.1720275572196,71.7606728572876,0,0.919608417733892,1.62055916824814,2.26057226753573,0.408218994907967,0.896796041993948,0.843315521037559,12.4177617954728,0,0.189106080167819,0.351902248327898,1.97276159184817,9.17555922444473,17.4126083261083,15.2278780941878,0.398068533636986,0,0.772043721344145,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0.810688095458557,1.16959989940266,1.3173006917463,0.939444931322602,1.47202963994889,0.720332286654991,9.25172592354634,2.64450566663544,0,0.928946687441754,2.44848176511977,2.62188582010345,2.66853652613844,3.80451252225118,4.74529061544512,3.95277491337626,5.52937459360593,5.17286827306992,3.8992817423824,6.29173586057955,7.99710784536369,8.76221602319216,0.189667900953082,0.456994050438915,0,1.22190796707189,0.581857461502877,1.47285221769669,0.885311519739602,1.32849133181642,1.09899109488962,1.35736880313981,70.2592726196543,0.166845105716094,0.393117990226406,0.674586337154561,1.62288097110802,4.3411888755435,8.65727896056827,11.5078454980324,9.07957269940198,24.1614043605512,27.3159592401974,26.0498663367952,35.8843324081745,70.2169280692971,53.6398266430517,69.9543105976882,1.10851914099963,0,0.651859905768103,0.678980343100753,0.469380496577004,1.00503754465089,0.238043640886014,0.780534591431195,1.26108115284953,0.8858587585951,0.478364305972461,1.63863314715738,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74032 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc009npe.1_5end | |||
|cluster_id=chr8:120197532..120197555,- | |||
|description=CAGE_peak_1_at_Sdr42e1_5end | |||
|id=chr8:120197532..120197555,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.83e-10!130;UBERON:0000925!6.83e-10!130;UBERON:0006595!6.83e-10!130;UBERON:0002365!7.97e-10!25;UBERON:0002330!7.97e-10!25;UBERON:0009854!1.25e-09!23;UBERON:0009856!1.25e-09!23;UBERON:0001007!3.58e-09!128;UBERON:0001555!3.58e-09!128;UBERON:0007026!3.58e-09!128;UBERON:0002107!5.03e-09!22;UBERON:0007499!5.03e-09!22;UBERON:0006925!5.03e-09!22;UBERON:0009497!5.03e-09!22;UBERON:0000015!5.03e-09!22;UBERON:0002423!5.03e-09!22;UBERON:0006235!5.03e-09!22;UBERON:0008835!5.03e-09!22;UBERON:0003894!5.03e-09!22;UBERON:0004161!5.03e-09!22;UBERON:0008836!5.03e-09!22;UBERON:0004921!9.97e-09!126;UBERON:0004185!9.97e-09!126;UBERON:0007023!7.76e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.88e-11,25;UBERON:0002330,6.88e-11,25;UBERON:0009854,1.18e-10,23;UBERON:0009856,1.18e-10,23;UBERON:0002107,5.93e-10,22;UBERON:0007499,5.93e-10,22;UBERON:0006925,5.93e-10,22;UBERON:0009497,5.93e-10,22;UBERON:0000015,5.93e-10,22;UBERON:0002423,5.93e-10,22;UBERON:0006235,5.93e-10,22;UBERON:0008835,5.93e-10,22;UBERON:0003894,5.93e-10,22;UBERON:0004161,5.93e-10,22;UBERON:0008836,5.93e-10,22;UBERON:0004119,6.38e-10,118;UBERON:0000925,6.38e-10,118;UBERON:0006595,6.38e-10,118;UBERON:0001007,3.94e-09,116;UBERON:0001555,3.94e-09,116;UBERON:0007026,3.94e-09,116;UBERON:0004921,1.20e-08,114;UBERON:0005409,1.62e-08,47;UBERON:0007023,2.17e-08,51;UBERON:0000160,4.59e-08,31 | |||
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| |||
|short_description=p1@Sdr42e1 | |||
}} |
Latest revision as of 14:29, 1 October 2015
Short description: | p1@Sdr42e1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sdr42e1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_uc009npe.1_5end |
EntrezGene: | Sdr42e1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 6.88e-11 | 25 |
exocrine system | 6.88e-11 | 25 |
digestive tract diverticulum | 1.18e-10 | 23 |
sac | 1.18e-10 | 23 |
liver | 5.93e-10 | 22 |
epithelial sac | 5.93e-10 | 22 |
digestive gland | 5.93e-10 | 22 |
epithelium of foregut-midgut junction | 5.93e-10 | 22 |
anatomical boundary | 5.93e-10 | 22 |
hepatobiliary system | 5.93e-10 | 22 |
foregut-midgut junction | 5.93e-10 | 22 |
hepatic diverticulum | 5.93e-10 | 22 |
liver primordium | 5.93e-10 | 22 |
septum transversum | 5.93e-10 | 22 |
liver bud | 5.93e-10 | 22 |
endoderm-derived structure | 6.38e-10 | 118 |
endoderm | 6.38e-10 | 118 |
presumptive endoderm | 6.38e-10 | 118 |
digestive system | 3.94e-09 | 116 |
digestive tract | 3.94e-09 | 116 |
primitive gut | 3.94e-09 | 116 |
subdivision of digestive tract | 1.20e-08 | 114 |
gastrointestinal system | 1.62e-08 | 47 |
adult organism | 2.17e-08 | 51 |
intestine | 4.59e-08 | 31 |