FFCP PHASE1:Mm9::chr11:48652174..48652216,+: Difference between revisions
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|id=chr11:48652174..48652216,+
|short_description=p3@Trim7
|description=CAGE_peak_3_at_Trim7_5end
|association_with_transcript=-89bp_to_ENSMUST00000129674_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=94089 | |EntrezGene=94089 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NCB9 | |UniProt=Q5NCB9 | ||
|association_with_transcript=-89bp_to_ENSMUST00000129674_5end | |||
|cluster_id=chr11:48652174..48652216,+ | |||
|description=CAGE_peak_3_at_Trim7_5end | |||
|id=chr11:48652174..48652216,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.98e-08!6;CL:0000556!1.98e-08!6;CL:0000050!9.84e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.35e-29,6;CL:0000556,7.35e-29,6;CL:0000050,4.06e-19,9;CL:0002027,1.22e-14,3;CL:0002006,1.22e-14,3;CL:0002024,1.22e-14,3;CL:0000839,4.20e-13,13;CL:0000763,1.47e-10,16;CL:0002031,7.17e-09,25;CL:0000049,8.19e-09,19;CL:0000988,9.32e-07,32;CL:0002032,9.32e-07,32;CL:0000037,9.32e-07,32;CL:0000837,9.32e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.51e-14,3;UBERON:0002193,1.40e-12,48;UBERON:0002405,1.40e-12,48;UBERON:0002371,1.47e-10,16;UBERON:0001962,5.79e-10,2;UBERON:0001961,5.79e-10,2;UBERON:0001744,5.79e-10,2;UBERON:0002106,8.39e-08,6;UBERON:0004457,8.39e-08,6;UBERON:0000042,8.39e-08,6;UBERON:0004854,8.39e-08,6;UBERON:0009034,8.39e-08,6;UBERON:0002095,8.39e-08,6;UBERON:0004782,8.39e-08,6;UBERON:0003281,8.39e-08,6;UBERON:0009664,8.39e-08,6;UBERON:0002296,8.39e-08,6;UBERON:0005602,8.39e-08,6;UBERON:0001179,8.39e-08,6;UBERON:0006293,8.39e-08,6;UBERON:0001474,1.53e-07,22;UBERON:0004765,1.53e-07,22;UBERON:0001434,1.53e-07,22;UBERON:0002390,1.65e-07,45;UBERON:0003061,1.65e-07,45 | |||
|phase1_expression=0,0.348975407639361,0,0,0,1.84667199103079,0.934450562382103,0.129123323441576,0,0,0,0,0,0,2.33176833270964,3.23960427823721,2.09868563438444,20.5050407482854,25.7775135178789,22.4926515452956,0.680346321208558,0.198581902401771,0,2.3998863419011,1.14704640533585,1.14846392823004,0.86152399231815,0.861884930743556,0,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,16.1071301815427,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,15.7952109024775,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.432276099749388,0,0,0,0,0,0,0.350679099451593,0.822074982615345,2.21415221969403,1.56998727841375,0.863780147452604,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,1.47802552133284,0,0,0,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,4.27177201994632,0,0,0.565105371014073,2.59719032669948,3.43167259809784,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0.734015410979976,0.724752362478018,0.576060012515731,0.632022241256357,0,0,0.129920822977795,0,0,0.120195449519969,0,0.504832249740738,0,0.302478555410522,0.584747284438515,0.288635524920988,0.935015217452552,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,0,0,0,1.84667199103079,0.934450562382103,0.129123323441576,0,0,0,0,0,0,2.33176833270964,3.23960427823721,2.09868563438444,20.5050407482854,25.7775135178789,22.4926515452956,0.680346321208558,0.198581902401771,0,2.3998863419011,1.14704640533585,1.14846392823004,0.86152399231815,0.861884930743556,0,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,16.1071301815427,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,15.7952109024775,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.432276099749388,0,0,0,0,0,0,0.350679099451593,0.822074982615345,2.21415221969403,1.56998727841375,0.863780147452604,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,1.47802552133284,0,0,0,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,4.27177201994632,0,0,0.565105371014073,2.59719032669948,3.43167259809784,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0.734015410979976,0.724752362478018,0.576060012515731,0.632022241256357,0,0,0.129920822977795,0,0,0.120195449519969,0,0.504832249740738,0,0.302478555410522,0.584747284438515,0.288635524920988,0.935015217452552,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p3@Trim7 | |||
}} | }} |
Latest revision as of 14:01, 1 October 2015
Short description: | p3@Trim7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trim7_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -89bp_to_ENSMUST00000129674_5end |
EntrezGene: | Trim7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.35e-29 | 6 |
megakaryocyte | 7.35e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 4.06e-19 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.22e-14 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.22e-14 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.22e-14 | 3 |
myeloid lineage restricted progenitor cell | 4.20e-13 | 13 |
myeloid cell | 1.47e-10 | 16 |
hematopoietic lineage restricted progenitor cell | 7.17e-09 | 25 |
common myeloid progenitor | 8.19e-09 | 19 |
hematopoietic cell | 9.32e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.32e-07 | 32 |
hematopoietic stem cell | 9.32e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.32e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.51e-14 | 3 |
hemolymphoid system | 1.40e-12 | 48 |
immune system | 1.40e-12 | 48 |
bone marrow | 1.47e-10 | 16 |
gut-associated lymphoid tissue | 5.79e-10 | 2 |
mucosa-associated lymphoid tissue | 5.79e-10 | 2 |
lymphoid tissue | 5.79e-10 | 2 |
spleen | 8.39e-08 | 6 |
cavity lining | 8.39e-08 | 6 |
serous membrane | 8.39e-08 | 6 |
gastrointestinal system mesentery | 8.39e-08 | 6 |
stomach region | 8.39e-08 | 6 |
mesentery | 8.39e-08 | 6 |
gastrointestinal system serosa | 8.39e-08 | 6 |
mesentery of stomach | 8.39e-08 | 6 |
gut mesentery | 8.39e-08 | 6 |
dorsal mesentery | 8.39e-08 | 6 |
dorsal mesogastrium | 8.39e-08 | 6 |
peritoneal cavity | 8.39e-08 | 6 |
spleen primordium | 8.39e-08 | 6 |
bone element | 1.53e-07 | 22 |
skeletal element | 1.53e-07 | 22 |
skeletal system | 1.53e-07 | 22 |
hematopoietic system | 1.65e-07 | 45 |
blood island | 1.65e-07 | 45 |