FFCP PHASE1:Mm9::chr1:72583722..72583746,-: Difference between revisions
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{{FFCP|EntrezGene=381270|HGNC=|MCL_coexpression_id=13|UniProt=Q80TE3|association_with_transcript=-218bp_to_ENSMUST00000047786_5end|description=CAGE_peak_2_at_March4_5end|id=chr1:72583722..72583746,-|ontology_enrichment_celltype=CL:0000117!2.29e-17!23;CL:0000337!2.29e-17!23;CL:0000540!9.05e-17!33;CL:0000047!9.05e-17!33;CL:0000031!9.05e-17!33;CL:0000404!9.05e-17!33;CL:0000393!2.94e-12!39;CL:0000211!2.94e-12!39;CL:0002319!3.77e-12!43;CL:0000221!1.38e-11!44;CL:0000133!1.38e-11!44;CL:0000055!9.37e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.55e-21,23;CL:0000337,2.55e-21,23;CL:0000540,1.66e-15,33;CL:0000047,1.66e-15,33;CL:0000031,1.66e-15,33;CL:0000404,1.66e-15,33;CL:0000393,9.64e-12,39;CL:0000211,9.64e-12,39;CL:0002319,7.39e-10,43;CL:0000221,1.91e-09,44;CL:0000133,1.91e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.43e-31!71;UBERON:0003075!1.43e-31!71;UBERON:0007284!1.43e-31!71;UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0001017!9.06e-31!73;UBERON:0005743!9.06e-31!73;UBERON:0001049!6.47e-28!52;UBERON:0005068!6.47e-28!52;UBERON:0006241!6.47e-28!52;UBERON:0007135!6.47e-28!52;UBERON:0004121!8.74e-28!102;UBERON:0000924!8.74e-28!102;UBERON:0006601!8.74e-28!102;UBERON:0000955!2.02e-25!50;UBERON:0006238!2.02e-25!50;UBERON:0002616!1.15e-24!49;UBERON:0000033!3.86e-24!63;UBERON:0002020!1.05e-23!34;UBERON:0003056!1.49e-23!49;UBERON:0003080!6.42e-22!40;UBERON:0002780!3.85e-21!39;UBERON:0001890!3.85e-21!39;UBERON:0006240!3.85e-21!39;UBERON:0002791!3.38e-19!29;UBERON:0003528!3.38e-19!29;UBERON:0001893!3.38e-19!29;UBERON:0007811!4.20e-13!86;UBERON:0000956!6.32e-13!21;UBERON:0001869!6.32e-13!21;UBERON:0000203!6.32e-13!21;UBERON:0002619!4.53e-11!17;UBERON:0000153!7.83e-11!94;UBERON:0002021!1.90e-09!10;UBERON:0000411!1.90e-09!10;UBERON:0001950!1.90e-09!10;UBERON:0002420!1.47e-07!8;UBERON:0007245!1.47e-07!8;UBERON:0010009!1.47e-07!8;UBERON:0010011!1.47e-07!8;UBERON:0000454!1.47e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-31,54;UBERON:0002346,1.11e-30,64;UBERON:0003075,1.11e-30,64;UBERON:0007284,1.11e-30,64;UBERON:0001049,7.06e-30,52;UBERON:0005068,7.06e-30,52;UBERON:0006241,7.06e-30,52;UBERON:0007135,7.06e-30,52;UBERON:0001017,1.44e-29,73;UBERON:0002020,2.38e-28,34;UBERON:0001016,2.86e-28,75;UBERON:0010371,1.12e-24,73;UBERON:0000955,1.68e-24,47;UBERON:0006238,1.68e-24,47;UBERON:0004121,6.23e-24,95;UBERON:0000924,6.23e-24,95;UBERON:0006601,6.23e-24,95;UBERON:0002616,1.31e-23,46;UBERON:0003528,9.66e-23,29;UBERON:0002791,9.66e-23,29;UBERON:0001893,9.66e-23,29;UBERON:0003056,1.23e-22,49;UBERON:0003080,3.89e-22,40;UBERON:0002780,3.28e-21,39;UBERON:0001890,3.28e-21,39;UBERON:0006240,3.28e-21,39;UBERON:0010314,3.08e-18,92;UBERON:0000956,5.91e-15,21;UBERON:0001869,5.91e-15,21;UBERON:0000203,5.91e-15,21;UBERON:0002619,1.25e-12,17;UBERON:0002021,2.04e-11,10;UBERON:0000411,2.04e-11,10;UBERON:0001950,2.04e-11,10;UBERON:0002420,4.61e-09,8;UBERON:0007245,4.61e-09,8;UBERON:0010009,4.61e-09,8;UBERON:0010011,4.61e-09,8;UBERON:0000454,4.61e-09,8;UBERON:0003076,4.23e-08,12;UBERON:0003057,4.23e-08,12;UBERON:0002240,1.51e-07,6;UBERON:0005174,1.51e-07,6;UBERON:0001137,1.51e-07,6;UBERON:0001948,7.79e-07,5;UBERON:0002315,7.79e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,11.9366711907163,15.869729378161,14.5781222806421,0,0,0,0,0,0,0,1.76272340924412,3.64516033495565,1.68259969081106,12.2829923293636,11.4851641294839,2.9397791811589,2.58782771749238,6.43453150627015,3.30347642998166,3.70293280447044,4.14737639791857,15.8263545276233,14.9124859071928,13.022834263919,5.02529398202486,5.06486349028512,5.19514042441154,16.7938293719991,14.8066548031067,17.1487490159277,0.530083353332288,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.29688427812965,0.346970653532272,1.21786191324856,0.922461989024234,1.20578112442098,1.05829836422134,0,0,0,0,0,0,0,0,5.27005434620785,3.14170060220183,0,0,0,0,6.5907881338122,7.77751024791665,7.03664371832041,5.56237824615285,6.64860189058859,4.36354893575076,4.86723789203273,0,0,0,1.05220927943237,0,0.229902104433473,0.720248519221397,1.05493372485001,2.04109497453984,2.0498195245576,1.40552586839593,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,6.38008596751563,0,0,0,0.232236671860439,0.515469845288373,0.201683524623343,1.33426826306922,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,3.28192722458169,0,0,0.94652465824877,1.56175497718655,1.72338718186239,0.477937595905104,0,0.849229592366497,0.809621403349789,0.584511715822624,1.58115111178609,5.14114106274891,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,2.30368628842969,1.8267896946876,0.23467170806371,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,15.2482997506608,19.3336599333014,19.4784474569395,12.2015759464018,7.53590771747707,6.7985450765073,8.77529250301348,4.95353323546643,7.25027854374727,9.31968561153276,0.31136204275253,2.79317411380722,1.19513524027894,3.64660075602441,2.72497111416377,2.02227859295016,2.22246727801615,1.85431551515005,1.28367683836726,3.79045817645696,2.5347929989024,4.71565853465191,2.06011316433741,1.92075457214608,1.32101578597911,3.33405583898152,2.0859178670074,2.31491064556446,2.06042950401653,3.09117732282234,1.71434626192708,1.95223386775271,1.66905332963125,2.0348498328526,2.25862512996793,2.5384382367503,2.37806364734604,1.8414879800649,1.22223702461276,2.80571135828869,1.89816028998679,1.97008964751127,2.04615521584845,1.85924209423159,2.3148793317737,4.99621155875892,2.33931608445408,1.71896843238639,1.72159498861959,0.441182838239031,0.463735671240843|short_description=p2@March4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381270 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q80TE3 | |||
|association_with_transcript=-218bp_to_ENSMUST00000047786_5end | |||
|cluster_id=chr1:72583722..72583746,- | |||
|description=CAGE_peak_2_at_March4_5end | |||
|id=chr1:72583722..72583746,- | |||
|ontology_enrichment_celltype=CL:0000117!2.29e-17!23;CL:0000337!2.29e-17!23;CL:0000540!9.05e-17!33;CL:0000047!9.05e-17!33;CL:0000031!9.05e-17!33;CL:0000404!9.05e-17!33;CL:0000393!2.94e-12!39;CL:0000211!2.94e-12!39;CL:0002319!3.77e-12!43;CL:0000221!1.38e-11!44;CL:0000133!1.38e-11!44;CL:0000055!9.37e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.55e-21,23;CL:0000337,2.55e-21,23;CL:0000540,1.66e-15,33;CL:0000047,1.66e-15,33;CL:0000031,1.66e-15,33;CL:0000404,1.66e-15,33;CL:0000393,9.64e-12,39;CL:0000211,9.64e-12,39;CL:0002319,7.39e-10,43;CL:0000221,1.91e-09,44;CL:0000133,1.91e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.43e-31!71;UBERON:0003075!1.43e-31!71;UBERON:0007284!1.43e-31!71;UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0001017!9.06e-31!73;UBERON:0005743!9.06e-31!73;UBERON:0001049!6.47e-28!52;UBERON:0005068!6.47e-28!52;UBERON:0006241!6.47e-28!52;UBERON:0007135!6.47e-28!52;UBERON:0004121!8.74e-28!102;UBERON:0000924!8.74e-28!102;UBERON:0006601!8.74e-28!102;UBERON:0000955!2.02e-25!50;UBERON:0006238!2.02e-25!50;UBERON:0002616!1.15e-24!49;UBERON:0000033!3.86e-24!63;UBERON:0002020!1.05e-23!34;UBERON:0003056!1.49e-23!49;UBERON:0003080!6.42e-22!40;UBERON:0002780!3.85e-21!39;UBERON:0001890!3.85e-21!39;UBERON:0006240!3.85e-21!39;UBERON:0002791!3.38e-19!29;UBERON:0003528!3.38e-19!29;UBERON:0001893!3.38e-19!29;UBERON:0007811!4.20e-13!86;UBERON:0000956!6.32e-13!21;UBERON:0001869!6.32e-13!21;UBERON:0000203!6.32e-13!21;UBERON:0002619!4.53e-11!17;UBERON:0000153!7.83e-11!94;UBERON:0002021!1.90e-09!10;UBERON:0000411!1.90e-09!10;UBERON:0001950!1.90e-09!10;UBERON:0002420!1.47e-07!8;UBERON:0007245!1.47e-07!8;UBERON:0010009!1.47e-07!8;UBERON:0010011!1.47e-07!8;UBERON:0000454!1.47e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-31,54;UBERON:0002346,1.11e-30,64;UBERON:0003075,1.11e-30,64;UBERON:0007284,1.11e-30,64;UBERON:0001049,7.06e-30,52;UBERON:0005068,7.06e-30,52;UBERON:0006241,7.06e-30,52;UBERON:0007135,7.06e-30,52;UBERON:0001017,1.44e-29,73;UBERON:0002020,2.38e-28,34;UBERON:0001016,2.86e-28,75;UBERON:0010371,1.12e-24,73;UBERON:0000955,1.68e-24,47;UBERON:0006238,1.68e-24,47;UBERON:0004121,6.23e-24,95;UBERON:0000924,6.23e-24,95;UBERON:0006601,6.23e-24,95;UBERON:0002616,1.31e-23,46;UBERON:0003528,9.66e-23,29;UBERON:0002791,9.66e-23,29;UBERON:0001893,9.66e-23,29;UBERON:0003056,1.23e-22,49;UBERON:0003080,3.89e-22,40;UBERON:0002780,3.28e-21,39;UBERON:0001890,3.28e-21,39;UBERON:0006240,3.28e-21,39;UBERON:0010314,3.08e-18,92;UBERON:0000956,5.91e-15,21;UBERON:0001869,5.91e-15,21;UBERON:0000203,5.91e-15,21;UBERON:0002619,1.25e-12,17;UBERON:0002021,2.04e-11,10;UBERON:0000411,2.04e-11,10;UBERON:0001950,2.04e-11,10;UBERON:0002420,4.61e-09,8;UBERON:0007245,4.61e-09,8;UBERON:0010009,4.61e-09,8;UBERON:0010011,4.61e-09,8;UBERON:0000454,4.61e-09,8;UBERON:0003076,4.23e-08,12;UBERON:0003057,4.23e-08,12;UBERON:0002240,1.51e-07,6;UBERON:0005174,1.51e-07,6;UBERON:0001137,1.51e-07,6;UBERON:0001948,7.79e-07,5;UBERON:0002315,7.79e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,11.9366711907163,15.869729378161,14.5781222806421,0,0,0,0,0,0,0,1.76272340924412,3.64516033495565,1.68259969081106,12.2829923293636,11.4851641294839,2.9397791811589,2.58782771749238,6.43453150627015,3.30347642998166,3.70293280447044,4.14737639791857,15.8263545276233,14.9124859071928,13.022834263919,5.02529398202486,5.06486349028512,5.19514042441154,16.7938293719991,14.8066548031067,17.1487490159277,0.530083353332288,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.29688427812965,0.346970653532272,1.21786191324856,0.922461989024234,1.20578112442098,1.05829836422134,0,0,0,0,0,0,0,0,5.27005434620785,3.14170060220183,0,0,0,0,6.5907881338122,7.77751024791665,7.03664371832041,5.56237824615285,6.64860189058859,4.36354893575076,4.86723789203273,0,0,0,1.05220927943237,0,0.229902104433473,0.720248519221397,1.05493372485001,2.04109497453984,2.0498195245576,1.40552586839593,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,6.38008596751563,0,0,0,0.232236671860439,0.515469845288373,0.201683524623343,1.33426826306922,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,3.28192722458169,0,0,0.94652465824877,1.56175497718655,1.72338718186239,0.477937595905104,0,0.849229592366497,0.809621403349789,0.584511715822624,1.58115111178609,5.14114106274891,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,2.30368628842969,1.8267896946876,0.23467170806371,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,15.2482997506608,19.3336599333014,19.4784474569395,12.2015759464018,7.53590771747707,6.7985450765073,8.77529250301348,4.95353323546643,7.25027854374727,9.31968561153276,0.31136204275253,2.79317411380722,1.19513524027894,3.64660075602441,2.72497111416377,2.02227859295016,2.22246727801615,1.85431551515005,1.28367683836726,3.79045817645696,2.5347929989024,4.71565853465191,2.06011316433741,1.92075457214608,1.32101578597911,3.33405583898152,2.0859178670074,2.31491064556446,2.06042950401653,3.09117732282234,1.71434626192708,1.95223386775271,1.66905332963125,2.0348498328526,2.25862512996793,2.5384382367503,2.37806364734604,1.8414879800649,1.22223702461276,2.80571135828869,1.89816028998679,1.97008964751127,2.04615521584845,1.85924209423159,2.3148793317737,4.99621155875892,2.33931608445408,1.71896843238639,1.72159498861959,0.441182838239031,0.463735671240843 | |||
|short_description=p2@March4 | |||
}} |
Latest revision as of 13:38, 1 October 2015
Short description: | p2@March4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_March4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -218bp_to_ENSMUST00000047786_5end |
EntrezGene: | March4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.55e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.55e-21 | 23 |
neuron | 1.66e-15 | 33 |
neuronal stem cell | 1.66e-15 | 33 |
neuroblast | 1.66e-15 | 33 |
electrically signaling cell | 1.66e-15 | 33 |
electrically responsive cell | 9.64e-12 | 39 |
electrically active cell | 9.64e-12 | 39 |
neural cell | 7.39e-10 | 43 |
ectodermal cell | 1.91e-09 | 44 |
neurectodermal cell | 1.91e-09 | 44 |