FFCP PHASE1:Mm9::chr6:52210774..52210787,-: Difference between revisions
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{{FFCP|EntrezGene=15398|HGNC=|MCL_coexpression_id=262|UniProt=Q496S0|association_with_transcript=8bp_to_ENSMUST00000114416,ENSMUST00000172961,ENSMUST00000173368,ENSMUST00000174763_5end|description=CAGE_peak_1_at_Hoxa13_5end|id=chr6:52210774..52210787,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!5.20e-12!23;UBERON:0002102!2.36e-10!8;UBERON:0004710!2.36e-10!8;UBERON:0005419!2.36e-10!8;UBERON:0005417!2.36e-10!8;UBERON:0005729!2.36e-10!8;UBERON:0004122!4.60e-07!5;UBERON:0000026!4.72e-07!13;UBERON:0004708!4.72e-07!13;UBERON:0002101!4.72e-07!13;UBERON:0004357!4.72e-07!13;UBERON:0009872!4.72e-07!13;UBERON:0004347!4.72e-07!13;UBERON:0005732!4.72e-07!13;UBERON:0005733!4.72e-07!13;UBERON:0004175!8.63e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.89e-32,7;UBERON:0004710,1.89e-32,7;UBERON:0005419,1.89e-32,7;UBERON:0005417,1.89e-32,7;UBERON:0005729,1.89e-32,7;UBERON:0010708,2.61e-28,8;UBERON:0003102,1.02e-19,22;UBERON:0000026,1.24e-18,12;UBERON:0004708,1.24e-18,12;UBERON:0002101,1.24e-18,12;UBERON:0004357,1.24e-18,12;UBERON:0004347,1.24e-18,12;UBERON:0005732,1.24e-18,12;UBERON:0005733,1.24e-18,12;UBERON:0010707,3.84e-17,13;UBERON:0000162,4.04e-14,3;UBERON:0001353,4.04e-14,3;UBERON:0000163,4.04e-14,3;UBERON:0006866,4.04e-14,3;UBERON:0001046,4.04e-14,3;UBERON:0000164,4.04e-14,3;UBERON:0000931,4.04e-14,3;UBERON:0010147,8.62e-10,2;UBERON:0003937,8.62e-10,2;UBERON:0005399,8.62e-10,2;UBERON:0000161,1.13e-08,5;UBERON:0004122,1.13e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,53.6764302402777,32.1480336285293,29.9116911078713,11.6173738186615,10.8438427197983,7.3132954969655,3.08673204611915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0.928946687441754,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0.596869416123452,0.779856348476481,0,1.29682829924817,1.59313018603494,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.469343416127421,0.42366414172764,1.54369878638473,0,0.322928853391811,0.301564624640779,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9888774149979,0,0.36630324853453,4.50173596066038,3.51100472824754,0,0,0,0,0,0,0,0,0,0,3.42498247027783,3.19219898720825,2.73173769206615,1.21553358534147,1.46729213839588,0.367687016900028,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0.789209134313529,0.135804113845862,0.561142271657738,0,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p1@Hoxa13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15398 | |||
|HGNC= | |||
|MCL_coexpression_id=262 | |||
|TSSclassifier=NA | |||
|UniProt=Q496S0 | |||
|association_with_transcript=8bp_to_ENSMUST00000114416,ENSMUST00000172961,ENSMUST00000173368,ENSMUST00000174763_5end | |||
|cluster_id=chr6:52210774..52210787,- | |||
|description=CAGE_peak_1_at_Hoxa13_5end | |||
|id=chr6:52210774..52210787,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.20e-12!23;UBERON:0002102!2.36e-10!8;UBERON:0004710!2.36e-10!8;UBERON:0005419!2.36e-10!8;UBERON:0005417!2.36e-10!8;UBERON:0005729!2.36e-10!8;UBERON:0004122!4.60e-07!5;UBERON:0000026!4.72e-07!13;UBERON:0004708!4.72e-07!13;UBERON:0002101!4.72e-07!13;UBERON:0004357!4.72e-07!13;UBERON:0009872!4.72e-07!13;UBERON:0004347!4.72e-07!13;UBERON:0005732!4.72e-07!13;UBERON:0005733!4.72e-07!13;UBERON:0004175!8.63e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.89e-32,7;UBERON:0004710,1.89e-32,7;UBERON:0005419,1.89e-32,7;UBERON:0005417,1.89e-32,7;UBERON:0005729,1.89e-32,7;UBERON:0010708,2.61e-28,8;UBERON:0003102,1.02e-19,22;UBERON:0000026,1.24e-18,12;UBERON:0004708,1.24e-18,12;UBERON:0002101,1.24e-18,12;UBERON:0004357,1.24e-18,12;UBERON:0004347,1.24e-18,12;UBERON:0005732,1.24e-18,12;UBERON:0005733,1.24e-18,12;UBERON:0010707,3.84e-17,13;UBERON:0000162,4.04e-14,3;UBERON:0001353,4.04e-14,3;UBERON:0000163,4.04e-14,3;UBERON:0006866,4.04e-14,3;UBERON:0001046,4.04e-14,3;UBERON:0000164,4.04e-14,3;UBERON:0000931,4.04e-14,3;UBERON:0010147,8.62e-10,2;UBERON:0003937,8.62e-10,2;UBERON:0005399,8.62e-10,2;UBERON:0000161,1.13e-08,5;UBERON:0004122,1.13e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,53.6764302402777,32.1480336285293,29.9116911078713,11.6173738186615,10.8438427197983,7.3132954969655,3.08673204611915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0.928946687441754,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0.596869416123452,0.779856348476481,0,1.29682829924817,1.59313018603494,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.469343416127421,0.42366414172764,1.54369878638473,0,0.322928853391811,0.301564624640779,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9888774149979,0,0.36630324853453,4.50173596066038,3.51100472824754,0,0,0,0,0,0,0,0,0,0,3.42498247027783,3.19219898720825,2.73173769206615,1.21553358534147,1.46729213839588,0.367687016900028,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0.789209134313529,0.135804113845862,0.561142271657738,0,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@Hoxa13 | |||
}} |
Latest revision as of 13:17, 1 October 2015
Short description: | p1@Hoxa13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hoxa13_5end |
Coexpression cluster: | MCL_coexpression_mm9:262 |
Association with transcript: | 8bp_to_ENSMUST00000114416, ENSMUST00000172961, ENSMUST00000173368, ENSMUST00000174763_5end |
EntrezGene: | Hoxa13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 1.89e-32 | 7 |
pectoral appendage | 1.89e-32 | 7 |
pectoral appendage bud | 1.89e-32 | 7 |
forelimb bud | 1.89e-32 | 7 |
forelimb/pectoral fin field | 1.89e-32 | 7 |
pectoral complex | 2.61e-28 | 8 |
surface structure | 1.02e-19 | 22 |
appendage | 1.24e-18 | 12 |
paired limb/fin | 1.24e-18 | 12 |
limb | 1.24e-18 | 12 |
paired limb/fin bud | 1.24e-18 | 12 |
limb bud | 1.24e-18 | 12 |
limb/fin field | 1.24e-18 | 12 |
limb field | 1.24e-18 | 12 |
appendage girdle complex | 3.84e-17 | 13 |
cloaca | 4.04e-14 | 3 |
anal region | 4.04e-14 | 3 |
embryonic cloaca | 4.04e-14 | 3 |
terminal part of digestive tract | 4.04e-14 | 3 |
hindgut | 4.04e-14 | 3 |
primitive urogenital sinus | 4.04e-14 | 3 |
proctodeum | 4.04e-14 | 3 |
male accessory sex gland | 8.62e-10 | 2 |
sex gland | 8.62e-10 | 2 |
male reproductive gland | 8.62e-10 | 2 |
orifice | 1.13e-08 | 5 |
genitourinary system | 1.13e-08 | 5 |