FFCP PHASE1:Mm9::chr15:91991966..91991982,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12805|HGNC=|MCL_coexpression_id=20|UniProt=P12960|association_with_transcript=178bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end|description=CAGE_peak_14_at_Cntn1_5end|id=chr15:91991966..91991982,+|ontology_enrichment_celltype=CL:0000117!9.62e-10!23;CL:0000337!9.62e-10!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.81e-13,3;CL:0002614,3.52e-12,3;CL:0000117,2.00e-10,23;CL:0000337,2.00e-10,23;CL:0000540,6.20e-07,33;CL:0000047,6.20e-07,33;CL:0000031,6.20e-07,33;CL:0000404,6.20e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.31e-23!73;UBERON:0005743!1.31e-23!73;UBERON:0000073!1.18e-22!75;UBERON:0001016!1.18e-22!75;UBERON:0001049!2.84e-22!52;UBERON:0005068!2.84e-22!52;UBERON:0006241!2.84e-22!52;UBERON:0007135!2.84e-22!52;UBERON:0000955!1.89e-20!50;UBERON:0006238!1.89e-20!50;UBERON:0000033!3.10e-20!63;UBERON:0002616!2.79e-19!49;UBERON:0002346!4.32e-19!71;UBERON:0003075!4.32e-19!71;UBERON:0007284!4.32e-19!71;UBERON:0004121!2.82e-18!102;UBERON:0000924!2.82e-18!102;UBERON:0006601!2.82e-18!102;UBERON:0002020!1.61e-17!34;UBERON:0003056!4.96e-13!49;UBERON:0003080!1.73e-12!40;UBERON:0002791!3.30e-12!29;UBERON:0003528!3.30e-12!29;UBERON:0001893!3.30e-12!29;UBERON:0007811!4.55e-12!86;UBERON:0003076!7.98e-12!12;UBERON:0003057!7.98e-12!12;UBERON:0002780!1.98e-11!39;UBERON:0001890!1.98e-11!39;UBERON:0006240!1.98e-11!39;UBERON:0000153!3.31e-10!94;UBERON:0002298!5.21e-10!6;UBERON:0002240!4.58e-09!6;UBERON:0005174!4.58e-09!6;UBERON:0001137!4.58e-09!6;UBERON:0002619!1.75e-08!17;UBERON:0002021!1.98e-08!10;UBERON:0000411!1.98e-08!10;UBERON:0001950!1.98e-08!10;UBERON:0000956!9.99e-08!21;UBERON:0001869!9.99e-08!21;UBERON:0000203!9.99e-08!21;UBERON:0001948!1.35e-07!5;UBERON:0002315!1.35e-07!5;UBERON:0002950!5.96e-07!4;UBERON:0001891!5.96e-07!4;UBERON:0009616!5.96e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.24e-27,54;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0001049,2.52e-22,52;UBERON:0005068,2.52e-22,52;UBERON:0006241,2.52e-22,52;UBERON:0007135,2.52e-22,52;UBERON:0000955,4.00e-19,47;UBERON:0006238,4.00e-19,47;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002346,1.41e-17,64;UBERON:0003075,1.41e-17,64;UBERON:0007284,1.41e-17,64;UBERON:0002616,5.02e-17,46;UBERON:0003076,1.43e-16,12;UBERON:0003057,1.43e-16,12;UBERON:0002950,3.28e-16,4;UBERON:0001891,3.28e-16,4;UBERON:0009616,3.28e-16,4;UBERON:0010286,3.28e-16,4;UBERON:0010371,4.89e-15,73;UBERON:0004684,1.81e-13,3;UBERON:0002275,1.81e-13,3;UBERON:0002038,3.52e-12,3;UBERON:0009663,3.52e-12,3;UBERON:0009661,3.52e-12,3;UBERON:0000125,3.52e-12,3;UBERON:0002308,3.52e-12,3;UBERON:0004733,2.13e-11,6;UBERON:0004732,2.13e-11,6;UBERON:0002028,2.13e-11,6;UBERON:0007277,2.13e-11,6;UBERON:0010314,2.70e-11,92;UBERON:0003080,3.86e-10,40;UBERON:0002020,5.16e-10,34;UBERON:0001896,5.74e-10,2;UBERON:0002298,5.74e-10,2;UBERON:0005290,5.74e-10,2;UBERON:0010096,5.74e-10,2;UBERON:0000025,1.65e-08,114;UBERON:0002780,1.86e-08,39;UBERON:0001890,1.86e-08,39;UBERON:0006240,1.86e-08,39;UBERON:0003056,5.98e-08,49;UBERON:0002420,6.67e-08,8;UBERON:0007245,6.67e-08,8;UBERON:0010009,6.67e-08,8;UBERON:0010011,6.67e-08,8;UBERON:0000454,6.67e-08,8;UBERON:0004111,9.62e-08,122;UBERON:0003528,1.81e-07,29;UBERON:0002791,1.81e-07,29;UBERON:0001893,1.81e-07,29;UBERON:0002240,5.40e-07,6;UBERON:0005174,5.40e-07,6;UBERON:0001137,5.40e-07,6;UBERON:0011216,6.78e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0,0,0.919218786610021,2.20231761998777,2.17068474744819,4.45458946443106,0.131886287730194,0,0,1.67509799400829,1.12552522006336,1.68078072554491,2.65165726926301,2.56269025438385,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.67557365450764,0,0,0,0,2.84602214869163,1.37250180845588,0.376963056338593,1.21677024134594,0.767146371990992,2.0778804455956,2.10913641988085,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,5.39173758324135,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,1.35004500046361,1.80128481289688,0.906284817968409,0,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.407412341537585,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p14@Cntn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12805 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=P12960 | |||
|association_with_transcript=178bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end | |||
|cluster_id=chr15:91991966..91991982,+ | |||
|description=CAGE_peak_14_at_Cntn1_5end | |||
|id=chr15:91991966..91991982,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.62e-10!23;CL:0000337!9.62e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.81e-13,3;CL:0002614,3.52e-12,3;CL:0000117,2.00e-10,23;CL:0000337,2.00e-10,23;CL:0000540,6.20e-07,33;CL:0000047,6.20e-07,33;CL:0000031,6.20e-07,33;CL:0000404,6.20e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-23!73;UBERON:0005743!1.31e-23!73;UBERON:0000073!1.18e-22!75;UBERON:0001016!1.18e-22!75;UBERON:0001049!2.84e-22!52;UBERON:0005068!2.84e-22!52;UBERON:0006241!2.84e-22!52;UBERON:0007135!2.84e-22!52;UBERON:0000955!1.89e-20!50;UBERON:0006238!1.89e-20!50;UBERON:0000033!3.10e-20!63;UBERON:0002616!2.79e-19!49;UBERON:0002346!4.32e-19!71;UBERON:0003075!4.32e-19!71;UBERON:0007284!4.32e-19!71;UBERON:0004121!2.82e-18!102;UBERON:0000924!2.82e-18!102;UBERON:0006601!2.82e-18!102;UBERON:0002020!1.61e-17!34;UBERON:0003056!4.96e-13!49;UBERON:0003080!1.73e-12!40;UBERON:0002791!3.30e-12!29;UBERON:0003528!3.30e-12!29;UBERON:0001893!3.30e-12!29;UBERON:0007811!4.55e-12!86;UBERON:0003076!7.98e-12!12;UBERON:0003057!7.98e-12!12;UBERON:0002780!1.98e-11!39;UBERON:0001890!1.98e-11!39;UBERON:0006240!1.98e-11!39;UBERON:0000153!3.31e-10!94;UBERON:0002298!5.21e-10!6;UBERON:0002240!4.58e-09!6;UBERON:0005174!4.58e-09!6;UBERON:0001137!4.58e-09!6;UBERON:0002619!1.75e-08!17;UBERON:0002021!1.98e-08!10;UBERON:0000411!1.98e-08!10;UBERON:0001950!1.98e-08!10;UBERON:0000956!9.99e-08!21;UBERON:0001869!9.99e-08!21;UBERON:0000203!9.99e-08!21;UBERON:0001948!1.35e-07!5;UBERON:0002315!1.35e-07!5;UBERON:0002950!5.96e-07!4;UBERON:0001891!5.96e-07!4;UBERON:0009616!5.96e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.24e-27,54;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0001049,2.52e-22,52;UBERON:0005068,2.52e-22,52;UBERON:0006241,2.52e-22,52;UBERON:0007135,2.52e-22,52;UBERON:0000955,4.00e-19,47;UBERON:0006238,4.00e-19,47;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002346,1.41e-17,64;UBERON:0003075,1.41e-17,64;UBERON:0007284,1.41e-17,64;UBERON:0002616,5.02e-17,46;UBERON:0003076,1.43e-16,12;UBERON:0003057,1.43e-16,12;UBERON:0002950,3.28e-16,4;UBERON:0001891,3.28e-16,4;UBERON:0009616,3.28e-16,4;UBERON:0010286,3.28e-16,4;UBERON:0010371,4.89e-15,73;UBERON:0004684,1.81e-13,3;UBERON:0002275,1.81e-13,3;UBERON:0002038,3.52e-12,3;UBERON:0009663,3.52e-12,3;UBERON:0009661,3.52e-12,3;UBERON:0000125,3.52e-12,3;UBERON:0002308,3.52e-12,3;UBERON:0004733,2.13e-11,6;UBERON:0004732,2.13e-11,6;UBERON:0002028,2.13e-11,6;UBERON:0007277,2.13e-11,6;UBERON:0010314,2.70e-11,92;UBERON:0003080,3.86e-10,40;UBERON:0002020,5.16e-10,34;UBERON:0001896,5.74e-10,2;UBERON:0002298,5.74e-10,2;UBERON:0005290,5.74e-10,2;UBERON:0010096,5.74e-10,2;UBERON:0000025,1.65e-08,114;UBERON:0002780,1.86e-08,39;UBERON:0001890,1.86e-08,39;UBERON:0006240,1.86e-08,39;UBERON:0003056,5.98e-08,49;UBERON:0002420,6.67e-08,8;UBERON:0007245,6.67e-08,8;UBERON:0010009,6.67e-08,8;UBERON:0010011,6.67e-08,8;UBERON:0000454,6.67e-08,8;UBERON:0004111,9.62e-08,122;UBERON:0003528,1.81e-07,29;UBERON:0002791,1.81e-07,29;UBERON:0001893,1.81e-07,29;UBERON:0002240,5.40e-07,6;UBERON:0005174,5.40e-07,6;UBERON:0001137,5.40e-07,6;UBERON:0011216,6.78e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0,0,0.919218786610021,2.20231761998777,2.17068474744819,4.45458946443106,0.131886287730194,0,0,1.67509799400829,1.12552522006336,1.68078072554491,2.65165726926301,2.56269025438385,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.67557365450764,0,0,0,0,2.84602214869163,1.37250180845588,0.376963056338593,1.21677024134594,0.767146371990992,2.0778804455956,2.10913641988085,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,5.39173758324135,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,1.35004500046361,1.80128481289688,0.906284817968409,0,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.407412341537585,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p14@Cntn1 | |||
}} |
Latest revision as of 08:49, 27 September 2015
Short description: | p14@Cntn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Cntn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 178bp_to_ENSMUST00000068378, NM_001159647, uc007xil.2_5end |
EntrezGene: | Cntn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.81e-13 | 3 |
neuron of the substantia nigra | 3.52e-12 | 3 |
CNS neuron (sensu Vertebrata) | 2.00e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.00e-10 | 23 |
neuron | 6.20e-07 | 33 |
neuronal stem cell | 6.20e-07 | 33 |
neuroblast | 6.20e-07 | 33 |
electrically signaling cell | 6.20e-07 | 33 |