FFCP PHASE1:Mm9::chr4:98590536..98590584,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230484 | |EntrezGene=230484 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BJQ2 | |UniProt=Q8BJQ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000091358_5end | |association_with_transcript=0bp_to_ENSMUST00000091358_5end | ||
|cluster_id=chr4:98590536..98590584,+ | |||
|description=CAGE_peak_2_at_Usp1_5end | |description=CAGE_peak_2_at_Usp1_5end | ||
|id=chr4:98590536..98590584,+ | |id=chr4:98590536..98590584,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.88e-11!130;UBERON:0000925!4.88e-11!130;UBERON:0006595!4.88e-11!130;UBERON:0001007!1.57e-10!128;UBERON:0001555!1.57e-10!128;UBERON:0007026!1.57e-10!128;UBERON:0004921!2.33e-10!126;UBERON:0004185!2.33e-10!126;UBERON:0004923!3.54e-08!24;UBERON:0005409!9.97e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.06e-11,118;UBERON:0000925,5.06e-11,118;UBERON:0006595,5.06e-11,118;UBERON:0001007,1.63e-10,116;UBERON:0001555,1.63e-10,116;UBERON:0007026,1.63e-10,116;UBERON:0004921,2.35e-10,114;UBERON:0004923,4.09e-08,24;UBERON:0005409,3.39e-07,47 | |||
|phase1_expression=0.80074423552397,4.53668029931169,2.72999543633722,6.35174843744343,6.01074875935617,3.02182689441402,3.50418960893289,3.74457637980571,5.20918271961167,8.42632294759177,7.19115466547121,6.22222840163624,2.22560948910567,3.3219752919219,8.99396356902289,15.7930708564064,14.6907994406911,2.99689057090326,2.60517423850904,2.12194825899015,38.5246104384346,0.695036658406197,1.30599894569468,2.23989391910769,2.98232065387321,3.44539178469012,2.58457197695445,1.72376986148711,5.70070258369122,7.05684363327806,4.21287970245079,0.635030673459631,2.46025915033828,0,5.77703239502549,4.48833542467929,4.69589519403449,2.92972141515835,8.5946887897618,6.28228492768558,2.94115744015507,6.83045484958446,2.42755176515577,2.51793635951155,1.72340783073175,1.10128051297009,0.782391344348039,0,0.219686182734472,0.972149495371417,0.279972843250725,1.43752564364972,1.51004345451963,1.45072428402269,1.68046899571232,1.80081605225163,1.71920063963254,1.03134418455488,0.404632921719196,0,0,0,0,0.899899717281399,0,0.7104801149461,0,0,0.518448061542388,0.540023753326763,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,2.20231761998777,2.042997409363,1.84327839907492,0.263772575460388,0.548925861614458,0,1.11673199600552,0,0.916789486660861,0.883885756421003,0.569486723196412,0,2.65041676666144,2.34271836331035,1.73918693221007,3.44169550792555,2.03991400112325,2.15881276655127,1.29955283489534,1.34408066129201,8.00533194750986,4.26075806445144,1.81850203222008,3.18005617059306,1.12674735821344,7.69958864485907,2.54805239706646,0,2.16491041011214,2.28023878927589,2.52762222507392,8.10705546005326,2.84831672011889,2.82040064223167,1.38788261412909,1.52232739156071,1.38369298353635,1.80867168663147,2.4693628498498,4.02133092254962,5.19109432242185,2.74738778147832,3.5384422077995,2.10296904931632,6.8460870722722,10.1823803158397,0,4.09893115816166,6.28340120440365,6.13096932500619,1.7972268675888,2.99951365496704,3.17675567682662,1.04853447583376,0.457500602818626,0.376963056338593,0.695297280769106,3.3243009452943,1.24672826735736,1.1356888414743,2.64782346010822,4.35424397135326,2.77995034277042,5.47148825304832,0.520481771850815,0.229902104433473,1.80062129805349,1.20563854268572,2.04109497453984,1.7935920839879,2.06143794031403,4.65666067330228,2.15567992932842,1.13463648100692,1.23165786914764,0.876782929710299,0.834141747676794,2.089512999133,2.26360350048738,0.59710280045548,3.51106593656617,3.86021860672073,3.40996199274711,1.03562886267751,1.40715635988658,1.2604344302271,0.946978942340841,1.37734962223183,0.771335564436891,1.39520366850245,0.804820204198858,2.33530684734339,1.81015834904829,1.31333971263276,3.16168357228837,3.07019973593198,3.51280184465681,3.08674763148855,1.26173969138476,2.26390147234426,5.28670052774077,3.17340679996253,0.639864751605702,1.62565670302307,1.9330119198314,2.21851877085677,2.44615848229357,2.28270751335071,4.74529061544512,4.44687177754829,2.01068167040216,4.17808591286417,3.70431765526328,7.19055526923377,2.37751854862164,4.38110801159608,0.569003702859245,0.571242563048644,0,1.22190796707189,2.13347735884388,2.59502533594179,2.15004226222475,2.06654207171443,2.35498091762062,2.96153193412321,2.66807364378434,5.17219827719892,6.4864468387357,7.42044970870017,7.30296436998611,7.47649195232492,6.11102044275408,4.60313819921297,5.83686816390127,3.0201755450689,5.75072826109418,4.46569137202204,1.87222603868736,4.04126204715379,3.40855085691633,5.30687873499704,3.8798169934987,1.89491411770485,1.79261474086228,1.52770577197669,1.17345124144251,1.67506257441816,1.42826184531608,3.12213836572478,1.89162172927429,3.32197034473162,1.91345722388985,3.11340297959902,3.28101465545202,3.32692834737477,3.01582567878545,2.71952841909355,3.44234991113325,3.03530420935206,1.28440471990234,1.87538698547525,5.90165803356032,2.01976741763498,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,1.33679204449436,0.849229592366497,0,1.75353514746787,1.97643888973262,1.28528526568723,2.55492153374884,0.890328018336276,3.4206261464251,2.8044920905331,6.63725691699814,1.94224508923985,1.51161778482376,1.32023555829129,1.77181135728464,2.15204603560749,3.87642439752332,2.90826983582004,2.13898427030833,3.16036757935816,3.16255825724996,1.03135543248187,1.70219802876894,0.36012218806262,0.388076051348264,1.50035924522115,1.06404140185364,0.891844088010353,0.493647061806363,1.2178597964584,6.57080782578389,2.54198485036584,2.20528398054962,7.25499512942512,5.48979050766079,4.82503399425247,5.13301079213487,5.58079059133208,4.08073171281791,2.59595422814714,7.17657699350981,0.82554747185289,4.07427960213366,9.98352822124862,8.61173634642459,5.49067615695654,1.86976272993241,1.81936888020755,1.52019971184866,2.86401185404534,2.05618395827738,2.03319467126849,1.62008011232702,2.50905955217362,1.74690050996942,2.02296519577231,3.30613822901344,3.92633912976044,3.24037433229482,3.72803587852155,297.629871625253,1.04661582230785,1.98550188548517,1.16670713006429,1.29159823477731,0.675824501963113,2.34714477291508,1.8228613878153,0.734015410979976,82.3801852016681,148.335453222801,1.89606672376907,1.21635129174099,1.02710957164827,1.42912905275575,1.07416017400489,2.18549490259391,2.04332264183947,1.9199638532695,1.51449674922221,2.28620419965,2.41982844328417,1.65678397257579,1.34696578296461,0.818138315270983,5.44152920676507,2.44184548711471,2.69141569828427,3.02192309455341,2.31827512838629,3.00291960721891,3.6630324853453,4.50173596066038,2.00628841614145,1.6942555278512,2.76195141904306,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,2.07104124700728,0.415149390336707,1.59609949360412,1.36586884603307,2.91728060481953,1.25767897576789,2.20612210140017,1.33348036680969,1.85431551515005,2.88827288632634,2.27427490587418,1.01391719956096,3.58390048633545,2.1537546718073,2.36893063898016,2.69946704091382,1.90517476513229,1.73826488917283,1.54327376370964,1.64834360321323,2.64958056241915,1.37147700954166,2.8396128985494,1.66905332963125,2.32554266611726,1.50575008664529,1.86152137361688,1.64635175585495,1.8414879800649,2.17286582153379,2.24456908663095,2.25406534435931,2.26560309463796,2.86461730218783,2.32405261778949,0.964533054905707,1.24905288968973,1.87145286756327,2.36358159453128,5.35607329792761,3.30887128679273,4.63735671240843 | |phase1_expression=0.80074423552397,4.53668029931169,2.72999543633722,6.35174843744343,6.01074875935617,3.02182689441402,3.50418960893289,3.74457637980571,5.20918271961167,8.42632294759177,7.19115466547121,6.22222840163624,2.22560948910567,3.3219752919219,8.99396356902289,15.7930708564064,14.6907994406911,2.99689057090326,2.60517423850904,2.12194825899015,38.5246104384346,0.695036658406197,1.30599894569468,2.23989391910769,2.98232065387321,3.44539178469012,2.58457197695445,1.72376986148711,5.70070258369122,7.05684363327806,4.21287970245079,0.635030673459631,2.46025915033828,0,5.77703239502549,4.48833542467929,4.69589519403449,2.92972141515835,8.5946887897618,6.28228492768558,2.94115744015507,6.83045484958446,2.42755176515577,2.51793635951155,1.72340783073175,1.10128051297009,0.782391344348039,0,0.219686182734472,0.972149495371417,0.279972843250725,1.43752564364972,1.51004345451963,1.45072428402269,1.68046899571232,1.80081605225163,1.71920063963254,1.03134418455488,0.404632921719196,0,0,0,0,0.899899717281399,0,0.7104801149461,0,0,0.518448061542388,0.540023753326763,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,2.20231761998777,2.042997409363,1.84327839907492,0.263772575460388,0.548925861614458,0,1.11673199600552,0,0.916789486660861,0.883885756421003,0.569486723196412,0,2.65041676666144,2.34271836331035,1.73918693221007,3.44169550792555,2.03991400112325,2.15881276655127,1.29955283489534,1.34408066129201,8.00533194750986,4.26075806445144,1.81850203222008,3.18005617059306,1.12674735821344,7.69958864485907,2.54805239706646,0,2.16491041011214,2.28023878927589,2.52762222507392,8.10705546005326,2.84831672011889,2.82040064223167,1.38788261412909,1.52232739156071,1.38369298353635,1.80867168663147,2.4693628498498,4.02133092254962,5.19109432242185,2.74738778147832,3.5384422077995,2.10296904931632,6.8460870722722,10.1823803158397,0,4.09893115816166,6.28340120440365,6.13096932500619,1.7972268675888,2.99951365496704,3.17675567682662,1.04853447583376,0.457500602818626,0.376963056338593,0.695297280769106,3.3243009452943,1.24672826735736,1.1356888414743,2.64782346010822,4.35424397135326,2.77995034277042,5.47148825304832,0.520481771850815,0.229902104433473,1.80062129805349,1.20563854268572,2.04109497453984,1.7935920839879,2.06143794031403,4.65666067330228,2.15567992932842,1.13463648100692,1.23165786914764,0.876782929710299,0.834141747676794,2.089512999133,2.26360350048738,0.59710280045548,3.51106593656617,3.86021860672073,3.40996199274711,1.03562886267751,1.40715635988658,1.2604344302271,0.946978942340841,1.37734962223183,0.771335564436891,1.39520366850245,0.804820204198858,2.33530684734339,1.81015834904829,1.31333971263276,3.16168357228837,3.07019973593198,3.51280184465681,3.08674763148855,1.26173969138476,2.26390147234426,5.28670052774077,3.17340679996253,0.639864751605702,1.62565670302307,1.9330119198314,2.21851877085677,2.44615848229357,2.28270751335071,4.74529061544512,4.44687177754829,2.01068167040216,4.17808591286417,3.70431765526328,7.19055526923377,2.37751854862164,4.38110801159608,0.569003702859245,0.571242563048644,0,1.22190796707189,2.13347735884388,2.59502533594179,2.15004226222475,2.06654207171443,2.35498091762062,2.96153193412321,2.66807364378434,5.17219827719892,6.4864468387357,7.42044970870017,7.30296436998611,7.47649195232492,6.11102044275408,4.60313819921297,5.83686816390127,3.0201755450689,5.75072826109418,4.46569137202204,1.87222603868736,4.04126204715379,3.40855085691633,5.30687873499704,3.8798169934987,1.89491411770485,1.79261474086228,1.52770577197669,1.17345124144251,1.67506257441816,1.42826184531608,3.12213836572478,1.89162172927429,3.32197034473162,1.91345722388985,3.11340297959902,3.28101465545202,3.32692834737477,3.01582567878545,2.71952841909355,3.44234991113325,3.03530420935206,1.28440471990234,1.87538698547525,5.90165803356032,2.01976741763498,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,1.33679204449436,0.849229592366497,0,1.75353514746787,1.97643888973262,1.28528526568723,2.55492153374884,0.890328018336276,3.4206261464251,2.8044920905331,6.63725691699814,1.94224508923985,1.51161778482376,1.32023555829129,1.77181135728464,2.15204603560749,3.87642439752332,2.90826983582004,2.13898427030833,3.16036757935816,3.16255825724996,1.03135543248187,1.70219802876894,0.36012218806262,0.388076051348264,1.50035924522115,1.06404140185364,0.891844088010353,0.493647061806363,1.2178597964584,6.57080782578389,2.54198485036584,2.20528398054962,7.25499512942512,5.48979050766079,4.82503399425247,5.13301079213487,5.58079059133208,4.08073171281791,2.59595422814714,7.17657699350981,0.82554747185289,4.07427960213366,9.98352822124862,8.61173634642459,5.49067615695654,1.86976272993241,1.81936888020755,1.52019971184866,2.86401185404534,2.05618395827738,2.03319467126849,1.62008011232702,2.50905955217362,1.74690050996942,2.02296519577231,3.30613822901344,3.92633912976044,3.24037433229482,3.72803587852155,297.629871625253,1.04661582230785,1.98550188548517,1.16670713006429,1.29159823477731,0.675824501963113,2.34714477291508,1.8228613878153,0.734015410979976,82.3801852016681,148.335453222801,1.89606672376907,1.21635129174099,1.02710957164827,1.42912905275575,1.07416017400489,2.18549490259391,2.04332264183947,1.9199638532695,1.51449674922221,2.28620419965,2.41982844328417,1.65678397257579,1.34696578296461,0.818138315270983,5.44152920676507,2.44184548711471,2.69141569828427,3.02192309455341,2.31827512838629,3.00291960721891,3.6630324853453,4.50173596066038,2.00628841614145,1.6942555278512,2.76195141904306,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,2.07104124700728,0.415149390336707,1.59609949360412,1.36586884603307,2.91728060481953,1.25767897576789,2.20612210140017,1.33348036680969,1.85431551515005,2.88827288632634,2.27427490587418,1.01391719956096,3.58390048633545,2.1537546718073,2.36893063898016,2.69946704091382,1.90517476513229,1.73826488917283,1.54327376370964,1.64834360321323,2.64958056241915,1.37147700954166,2.8396128985494,1.66905332963125,2.32554266611726,1.50575008664529,1.86152137361688,1.64635175585495,1.8414879800649,2.17286582153379,2.24456908663095,2.25406534435931,2.26560309463796,2.86461730218783,2.32405261778949,0.964533054905707,1.24905288968973,1.87145286756327,2.36358159453128,5.35607329792761,3.30887128679273,4.63735671240843 | ||
|short_description=p2@Usp1 | |short_description=p2@Usp1 | ||
}} | }} |
Latest revision as of 08:01, 27 September 2015
Short description: | p2@Usp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Usp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000091358_5end |
EntrezGene: | Usp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.06e-11 | 118 |
endoderm | 5.06e-11 | 118 |
presumptive endoderm | 5.06e-11 | 118 |
digestive system | 1.63e-10 | 116 |
digestive tract | 1.63e-10 | 116 |
primitive gut | 1.63e-10 | 116 |
subdivision of digestive tract | 2.35e-10 | 114 |
organ component layer | 4.09e-08 | 24 |
gastrointestinal system | 3.39e-07 | 47 |