FFCP PHASE1:Mm9::chr6:48668601..48668612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16205 | |EntrezGene=16205 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |MCL_coexpression_id=18 | ||
|TSSclassifier=NA | |||
|UniProt=D3YZL2 | |UniProt=D3YZL2 | ||
|association_with_transcript=0bp_to_ENSMUST00000127537_5end | |association_with_transcript=0bp_to_ENSMUST00000127537_5end | ||
|cluster_id=chr6:48668601..48668612,+ | |||
|description=CAGE_peak_3_at_Gimap1_5end | |description=CAGE_peak_3_at_Gimap1_5end | ||
|id=chr6:48668601..48668612,+ | |id=chr6:48668601..48668612,+ | ||
|ontology_enrichment_celltype=CL:0002031!9.72e-08!25;CL:0000838!4.70e-07!12;CL:0000553!7.03e-07!6;CL:0000556!7.03e-07!6 | |ontology_enrichment_celltype=CL:0002031!9.72e-08!25;CL:0000838!4.70e-07!12;CL:0000553!7.03e-07!6;CL:0000556!7.03e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,6.46e-18,6;CL:0000556,6.46e-18,6;CL:0002031,1.05e-15,25;CL:0000988,4.16e-12,32;CL:0002032,4.16e-12,32;CL:0000037,4.16e-12,32;CL:0000837,4.16e-12,32;CL:0000050,4.92e-12,9;CL:0000838,1.38e-08,12;CL:0000839,2.16e-08,13;CL:0002320,3.52e-08,46;CL:0000134,3.52e-08,46;CL:0000542,6.08e-08,13;CL:0000051,6.08e-08,13;CL:0000624,1.34e-07,8;CL:0000945,1.53e-07,1;CL:0000236,1.53e-07,1;CL:0000826,1.53e-07,1;CL:0000815,2.37e-07,1;CL:0000792,2.37e-07,1;CL:0000763,7.57e-07,16;CL:0000219,7.64e-07,54;CL:0000791,8.27e-07,9;CL:0000789,8.27e-07,9;CL:0002420,8.27e-07,9;CL:0002419,8.27e-07,9;CL:0000790,8.27e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.67e-13!48;UBERON:0004177!2.45e-12!29;UBERON:0002390!5.61e-12!45;UBERON:0003061!5.61e-12!45;UBERON:0002405!5.01e-10!70;UBERON:0003408!3.24e-09!24;UBERON:0002370!3.52e-08!23;UBERON:0000974!3.52e-08!23;UBERON:0004807!3.52e-08!23;UBERON:0005058!3.52e-08!23;UBERON:0003351!3.52e-08!23;UBERON:0009113!3.52e-08!23;UBERON:0003295!3.52e-08!23;UBERON:0009722!3.52e-08!23;UBERON:0005562!3.52e-08!23;UBERON:0007690!3.52e-08!23;UBERON:0005057!8.23e-08!51;UBERON:0006562!1.08e-07!24;UBERON:0001557!1.08e-07!24;UBERON:0001042!1.08e-07!24;UBERON:0008814!1.08e-07!24;UBERON:0009145!1.08e-07!24;UBERON:0001004!7.45e-07!42 | |ontology_enrichment_uberon=UBERON:0002193!1.67e-13!48;UBERON:0004177!2.45e-12!29;UBERON:0002390!5.61e-12!45;UBERON:0003061!5.61e-12!45;UBERON:0002405!5.01e-10!70;UBERON:0003408!3.24e-09!24;UBERON:0002370!3.52e-08!23;UBERON:0000974!3.52e-08!23;UBERON:0004807!3.52e-08!23;UBERON:0005058!3.52e-08!23;UBERON:0003351!3.52e-08!23;UBERON:0009113!3.52e-08!23;UBERON:0003295!3.52e-08!23;UBERON:0009722!3.52e-08!23;UBERON:0005562!3.52e-08!23;UBERON:0007690!3.52e-08!23;UBERON:0005057!8.23e-08!51;UBERON:0006562!1.08e-07!24;UBERON:0001557!1.08e-07!24;UBERON:0001042!1.08e-07!24;UBERON:0008814!1.08e-07!24;UBERON:0009145!1.08e-07!24;UBERON:0001004!7.45e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.80e-12,48;UBERON:0002405,2.80e-12,48;UBERON:0002390,1.39e-10,45;UBERON:0003061,1.39e-10,45;UBERON:0002106,7.79e-10,6;UBERON:0004457,7.79e-10,6;UBERON:0000042,7.79e-10,6;UBERON:0004854,7.79e-10,6;UBERON:0009034,7.79e-10,6;UBERON:0002095,7.79e-10,6;UBERON:0004782,7.79e-10,6;UBERON:0003281,7.79e-10,6;UBERON:0009664,7.79e-10,6;UBERON:0002296,7.79e-10,6;UBERON:0005602,7.79e-10,6;UBERON:0001179,7.79e-10,6;UBERON:0006293,7.79e-10,6;UBERON:0002384,3.52e-08,46;UBERON:0000029,7.32e-08,1;UBERON:0001097,7.32e-08,1;UBERON:0003968,7.32e-08,1;UBERON:0001467,7.32e-08,1;UBERON:0001044,1.33e-07,1;UBERON:0001736,1.33e-07,1;UBERON:0003293,1.33e-07,1;UBERON:0003294,1.33e-07,1;UBERON:0001829,1.33e-07,1;UBERON:0010047,1.33e-07,1;UBERON:0000167,1.33e-07,1;UBERON:0006298,1.33e-07,1;UBERON:0002371,7.57e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,2.73921167889929,1.57356724354195,0.333109761815663,2.22722794128809,0,9.46386496074713,8.91243818437302,8.91218268775863,0.17008658030214,0.794327609607082,0.261199789138935,0,0.91763712426868,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.8456086666351,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.14300613835475,0,0,0,0,0,0,0,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0.766371165625774,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.81931657357869,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,1.87957968877638,0,0.185194527369712,0.376736914009382,1.50363650493128,1.37266903923914,1.01987057996313,0.979660166265606,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0.358053391334963,0,0.120195449519969,0.295379054349154,0.302899349844443,0.381034033274999,0.201652370273681,0.682205165178267,0.288635524920988,0.935015217452552,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,2.73921167889929,1.57356724354195,0.333109761815663,2.22722794128809,0,9.46386496074713,8.91243818437302,8.91218268775863,0.17008658030214,0.794327609607082,0.261199789138935,0,0.91763712426868,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.8456086666351,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.14300613835475,0,0,0,0,0,0,0,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0.766371165625774,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.81931657357869,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,1.87957968877638,0,0.185194527369712,0.376736914009382,1.50363650493128,1.37266903923914,1.01987057996313,0.979660166265606,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0.358053391334963,0,0.120195449519969,0.295379054349154,0.302899349844443,0.381034033274999,0.201652370273681,0.682205165178267,0.288635524920988,0.935015217452552,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p3@Gimap1 | |short_description=p3@Gimap1 | ||
}} | }} |
Latest revision as of 07:40, 27 September 2015
Short description: | p3@Gimap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gimap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 0bp_to_ENSMUST00000127537_5end |
EntrezGene: | Gimap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 6.46e-18 | 6 |
megakaryocyte | 6.46e-18 | 6 |
hematopoietic lineage restricted progenitor cell | 1.05e-15 | 25 |
hematopoietic cell | 4.16e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.16e-12 | 32 |
hematopoietic stem cell | 4.16e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.16e-12 | 32 |
megakaryocyte-erythroid progenitor cell | 4.92e-12 | 9 |
lymphoid lineage restricted progenitor cell | 1.38e-08 | 12 |
myeloid lineage restricted progenitor cell | 2.16e-08 | 13 |
connective tissue cell | 3.52e-08 | 46 |
mesenchymal cell | 3.52e-08 | 46 |
lymphocyte | 6.08e-08 | 13 |
common lymphoid progenitor | 6.08e-08 | 13 |
CD4-positive, alpha-beta T cell | 1.34e-07 | 8 |
lymphocyte of B lineage | 1.53e-07 | 1 |
B cell | 1.53e-07 | 1 |
pro-B cell | 1.53e-07 | 1 |
regulatory T cell | 2.37e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.37e-07 | 1 |
myeloid cell | 7.57e-07 | 16 |
motile cell | 7.64e-07 | 54 |
mature alpha-beta T cell | 8.27e-07 | 9 |
alpha-beta T cell | 8.27e-07 | 9 |
immature T cell | 8.27e-07 | 9 |
mature T cell | 8.27e-07 | 9 |
immature alpha-beta T cell | 8.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.80e-12 | 48 |
immune system | 2.80e-12 | 48 |
hematopoietic system | 1.39e-10 | 45 |
blood island | 1.39e-10 | 45 |
spleen | 7.79e-10 | 6 |
cavity lining | 7.79e-10 | 6 |
serous membrane | 7.79e-10 | 6 |
gastrointestinal system mesentery | 7.79e-10 | 6 |
stomach region | 7.79e-10 | 6 |
mesentery | 7.79e-10 | 6 |
gastrointestinal system serosa | 7.79e-10 | 6 |
mesentery of stomach | 7.79e-10 | 6 |
gut mesentery | 7.79e-10 | 6 |
dorsal mesentery | 7.79e-10 | 6 |
dorsal mesogastrium | 7.79e-10 | 6 |
peritoneal cavity | 7.79e-10 | 6 |
spleen primordium | 7.79e-10 | 6 |
connective tissue | 3.52e-08 | 46 |
lymph node | 7.32e-08 | 1 |
axillary lymph node | 7.32e-08 | 1 |
peripheral lymph node | 7.32e-08 | 1 |
shoulder | 7.32e-08 | 1 |
saliva-secreting gland | 1.33e-07 | 1 |
submandibular gland | 1.33e-07 | 1 |
gland of oral region | 1.33e-07 | 1 |
gland of foregut | 1.33e-07 | 1 |
major salivary gland | 1.33e-07 | 1 |
oral gland | 1.33e-07 | 1 |
oral cavity | 1.33e-07 | 1 |
submandibular gland primordium | 1.33e-07 | 1 |
bone marrow | 7.57e-07 | 16 |