FFCP PHASE1:Mm9::chr13:24298129..24298138,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68732 | |EntrezGene=68732 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q7X4 | |UniProt=E9Q7X4 | ||
|association_with_transcript=23bp_to_ENSMUST00000123076_5end | |association_with_transcript=23bp_to_ENSMUST00000123076_5end | ||
|cluster_id=chr13:24298129..24298138,- | |||
|description=CAGE_peak_12_at_Lrrc16a_5end | |description=CAGE_peak_12_at_Lrrc16a_5end | ||
|id=chr13:24298129..24298138,- | |id=chr13:24298129..24298138,- | ||
|ontology_enrichment_celltype=CL:0000553!6.32e-10!6;CL:0000556!6.32e-10!6 | |ontology_enrichment_celltype=CL:0000553!6.32e-10!6;CL:0000556!6.32e-10!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.63e-23,6;CL:0000556,9.63e-23,6;CL:0000945,6.79e-16,1;CL:0000236,6.79e-16,1;CL:0000826,6.79e-16,1;CL:0000050,1.89e-15,9;CL:0000839,6.16e-11,13;CL:0002031,5.78e-10,25;CL:0000763,5.07e-09,16;CL:0000988,6.80e-08,32;CL:0002032,6.80e-08,32;CL:0000037,6.80e-08,32;CL:0000837,6.80e-08,32;CL:0000049,1.05e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.87e-12!48;UBERON:0002390!5.82e-10!45;UBERON:0003061!5.82e-10!45;UBERON:0002106!1.27e-09!6;UBERON:0004457!1.27e-09!6;UBERON:0000042!1.27e-09!6;UBERON:0004854!1.27e-09!6;UBERON:0009034!1.27e-09!6;UBERON:0002095!1.27e-09!6;UBERON:0004782!1.27e-09!6;UBERON:0003281!1.27e-09!6;UBERON:0009664!1.27e-09!6;UBERON:0002296!1.27e-09!6;UBERON:0005602!1.27e-09!6;UBERON:0001179!1.27e-09!6;UBERON:0006293!1.27e-09!6;UBERON:0004177!7.76e-08!29;UBERON:0007823!1.40e-07!5;UBERON:0003887!1.55e-07!10;UBERON:0002405!9.93e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.86e-15,1;UBERON:0001097,1.86e-15,1;UBERON:0003968,1.86e-15,1;UBERON:0001467,1.86e-15,1;UBERON:0002371,5.07e-09,16;UBERON:0002193,5.33e-08,48;UBERON:0002405,5.33e-08,48;UBERON:0001474,9.67e-07,22;UBERON:0004765,9.67e-07,22;UBERON:0001434,9.67e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,3.47008381894061,4.38766187538364,1.27316895539409,0.17008658030214,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.370389054739423,0.753473828018764,0.683471138605126,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,3.47008381894061,4.38766187538364,1.27316895539409,0.17008658030214,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.370389054739423,0.753473828018764,0.683471138605126,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p12@Lrrc16a | |short_description=p12@Lrrc16a | ||
}} | }} |
Latest revision as of 07:30, 27 September 2015
Short description: | p12@Lrrc16a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Lrrc16a_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 23bp_to_ENSMUST00000123076_5end |
EntrezGene: | Lrrc16a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.63e-23 | 6 |
megakaryocyte | 9.63e-23 | 6 |
lymphocyte of B lineage | 6.79e-16 | 1 |
B cell | 6.79e-16 | 1 |
pro-B cell | 6.79e-16 | 1 |
megakaryocyte-erythroid progenitor cell | 1.89e-15 | 9 |
myeloid lineage restricted progenitor cell | 6.16e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 5.78e-10 | 25 |
myeloid cell | 5.07e-09 | 16 |
hematopoietic cell | 6.80e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.80e-08 | 32 |
hematopoietic stem cell | 6.80e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.80e-08 | 32 |
common myeloid progenitor | 1.05e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.86e-15 | 1 |
axillary lymph node | 1.86e-15 | 1 |
peripheral lymph node | 1.86e-15 | 1 |
shoulder | 1.86e-15 | 1 |
bone marrow | 5.07e-09 | 16 |
hemolymphoid system | 5.33e-08 | 48 |
immune system | 5.33e-08 | 48 |
bone element | 9.67e-07 | 22 |
skeletal element | 9.67e-07 | 22 |
skeletal system | 9.67e-07 | 22 |