FFCP PHASE1:Mm9::chr18:42213329..42213343,+: Difference between revisions
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{{FFCP|EntrezGene=269016|HGNC=|UniProt=Q8BZT2|association_with_transcript=8bp_to_ENSMUST00000072008_5end|description=CAGE_peak_4_at_Sh3rf2_5end|id=chr18:42213329..42213343,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.56e-10,3;CL:0002202,3.56e-10,3;CL:0000069,3.56e-10,3;CL:0002632,3.56e-10,3;CL:0002368,3.56e-10,3;CL:0000307,3.56e-10,3;CL:0000377,3.56e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.35e-08!17;UBERON:0005181!1.35e-08!17;UBERON:0002224!1.35e-08!17;UBERON:0000915!1.35e-08!17;UBERON:0008947!1.35e-08!17;UBERON:0003258!1.35e-08!17;UBERON:0004119!2.90e-08!130;UBERON:0000925!2.90e-08!130;UBERON:0006595!2.90e-08!130;UBERON:0001007!4.64e-08!128;UBERON:0001555!4.64e-08!128;UBERON:0007026!4.64e-08!128;UBERON:0005409!5.83e-08!59;UBERON:0004921!2.48e-07!126;UBERON:0004185!2.48e-07!126;UBERON:0000344!6.03e-07!15;UBERON:0000014!9.64e-07!5;UBERON:0001003!9.64e-07!5;UBERON:0002097!9.64e-07!5;UBERON:0002199!9.64e-07!5;UBERON:0007029!9.64e-07!5;UBERON:0007376!9.64e-07!5;UBERON:0002416!9.64e-07!5;UBERON:0007383!9.64e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.61e-17,5;UBERON:0001003,2.61e-17,5;UBERON:0002097,2.61e-17,5;UBERON:0002199,2.61e-17,5;UBERON:0007029,2.61e-17,5;UBERON:0007376,2.61e-17,5;UBERON:0002416,2.61e-17,5;UBERON:0007383,2.61e-17,5;UBERON:0003102,1.00e-10,22;UBERON:0003126,3.56e-10,3;UBERON:0001005,3.56e-10,3;UBERON:0007196,3.56e-10,3;UBERON:0001558,3.56e-10,3;UBERON:0004921,1.15e-08,114;UBERON:0001007,1.94e-08,116;UBERON:0001555,1.94e-08,116;UBERON:0007026,1.94e-08,116;UBERON:0004119,3.20e-08,118;UBERON:0000925,3.20e-08,118;UBERON:0006595,3.20e-08,118;UBERON:0005178,3.55e-08,17;UBERON:0005181,3.55e-08,17;UBERON:0002224,3.55e-08,17;UBERON:0000915,3.55e-08,17;UBERON:0008947,3.55e-08,17;UBERON:0003258,3.55e-08,17;UBERON:0002108,3.97e-07,4;UBERON:0005409,5.25e-07,47|phase1_expression=0,0,0,0.90739263392049,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0.68822784320151,0,0,0.215471232685889,1.33016393619462,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,1.32987716286794,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,1.5154372870785,2.78695852022608,2.02209778005913,0.45673551887624,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.648965052271031,0.203678727700633,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,2.089512999133,2.05782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.584799949701329,0.439100230582101,0.671032093801859,0,0,0.991256348951394,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,1.08069024937347,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0,0.714130922658041,0.975668239288994,0.157635144106191,1.10732344824387,0.797273843287435,1.47476983244164,2.24490476425664,2.4590339958857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0.63549621259146,0.220528398054962,3.79238381765404,2.74489525383039,3.86002719540197,2.86493625607528,2.79039529566604,1.7488850197791,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0.836353184057875,2.40198820120795,1.34864346384821,1.57041565878138,2.35580347785627,5.31421390496351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,1.36038230169127,0,0,0,0.19318959403219,0,0,2.14368379079066,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0.377252682772152,0.561849044819294,0.320125762024346,0.631790158511746,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.145346416632329,0.470546902076653,0.423073039458382,0,0,0,0,0,0.591026894253381,0,0.464810523557898,0.771626443924566,0.249810577937946,0.233931608445408,0.644613162144895,0,0.661774257358546,0|short_description=p4@Sh3rf2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269016 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BZT2 | |||
|association_with_transcript=8bp_to_ENSMUST00000072008_5end | |||
|cluster_id=chr18:42213329..42213343,+ | |||
|description=CAGE_peak_4_at_Sh3rf2_5end | |||
|id=chr18:42213329..42213343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.56e-10,3;CL:0002202,3.56e-10,3;CL:0000069,3.56e-10,3;CL:0002632,3.56e-10,3;CL:0002368,3.56e-10,3;CL:0000307,3.56e-10,3;CL:0000377,3.56e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.35e-08!17;UBERON:0005181!1.35e-08!17;UBERON:0002224!1.35e-08!17;UBERON:0000915!1.35e-08!17;UBERON:0008947!1.35e-08!17;UBERON:0003258!1.35e-08!17;UBERON:0004119!2.90e-08!130;UBERON:0000925!2.90e-08!130;UBERON:0006595!2.90e-08!130;UBERON:0001007!4.64e-08!128;UBERON:0001555!4.64e-08!128;UBERON:0007026!4.64e-08!128;UBERON:0005409!5.83e-08!59;UBERON:0004921!2.48e-07!126;UBERON:0004185!2.48e-07!126;UBERON:0000344!6.03e-07!15;UBERON:0000014!9.64e-07!5;UBERON:0001003!9.64e-07!5;UBERON:0002097!9.64e-07!5;UBERON:0002199!9.64e-07!5;UBERON:0007029!9.64e-07!5;UBERON:0007376!9.64e-07!5;UBERON:0002416!9.64e-07!5;UBERON:0007383!9.64e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.61e-17,5;UBERON:0001003,2.61e-17,5;UBERON:0002097,2.61e-17,5;UBERON:0002199,2.61e-17,5;UBERON:0007029,2.61e-17,5;UBERON:0007376,2.61e-17,5;UBERON:0002416,2.61e-17,5;UBERON:0007383,2.61e-17,5;UBERON:0003102,1.00e-10,22;UBERON:0003126,3.56e-10,3;UBERON:0001005,3.56e-10,3;UBERON:0007196,3.56e-10,3;UBERON:0001558,3.56e-10,3;UBERON:0004921,1.15e-08,114;UBERON:0001007,1.94e-08,116;UBERON:0001555,1.94e-08,116;UBERON:0007026,1.94e-08,116;UBERON:0004119,3.20e-08,118;UBERON:0000925,3.20e-08,118;UBERON:0006595,3.20e-08,118;UBERON:0005178,3.55e-08,17;UBERON:0005181,3.55e-08,17;UBERON:0002224,3.55e-08,17;UBERON:0000915,3.55e-08,17;UBERON:0008947,3.55e-08,17;UBERON:0003258,3.55e-08,17;UBERON:0002108,3.97e-07,4;UBERON:0005409,5.25e-07,47 | |||
|phase1_expression=0,0,0,0.90739263392049,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0.68822784320151,0,0,0.215471232685889,1.33016393619462,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,1.32987716286794,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,1.5154372870785,2.78695852022608,2.02209778005913,0.45673551887624,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.648965052271031,0.203678727700633,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,2.089512999133,2.05782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.584799949701329,0.439100230582101,0.671032093801859,0,0,0.991256348951394,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,1.08069024937347,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0,0.714130922658041,0.975668239288994,0.157635144106191,1.10732344824387,0.797273843287435,1.47476983244164,2.24490476425664,2.4590339958857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0.63549621259146,0.220528398054962,3.79238381765404,2.74489525383039,3.86002719540197,2.86493625607528,2.79039529566604,1.7488850197791,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0.836353184057875,2.40198820120795,1.34864346384821,1.57041565878138,2.35580347785627,5.31421390496351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,1.36038230169127,0,0,0,0.19318959403219,0,0,2.14368379079066,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0.377252682772152,0.561849044819294,0.320125762024346,0.631790158511746,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.145346416632329,0.470546902076653,0.423073039458382,0,0,0,0,0,0.591026894253381,0,0.464810523557898,0.771626443924566,0.249810577937946,0.233931608445408,0.644613162144895,0,0.661774257358546,0 | |||
|short_description=p4@Sh3rf2 | |||
}} |
Latest revision as of 06:48, 27 September 2015
Short description: | p4@Sh3rf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sh3rf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENSMUST00000072008_5end |
EntrezGene: | Sh3rf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.56e-10 | 3 |
epithelial cell of tracheobronchial tree | 3.56e-10 | 3 |
branched duct epithelial cell | 3.56e-10 | 3 |
epithelial cell of lower respiratory tract | 3.56e-10 | 3 |
respiratory epithelial cell | 3.56e-10 | 3 |
tracheal epithelial cell | 3.56e-10 | 3 |
tracheoblast | 3.56e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.61e-17 | 5 |
skin epidermis | 2.61e-17 | 5 |
skin of body | 2.61e-17 | 5 |
integument | 2.61e-17 | 5 |
surface | 2.61e-17 | 5 |
outer epithelium | 2.61e-17 | 5 |
integumental system | 2.61e-17 | 5 |
enveloping layer of ectoderm | 2.61e-17 | 5 |
surface structure | 1.00e-10 | 22 |
trachea | 3.56e-10 | 3 |
respiratory airway | 3.56e-10 | 3 |
tracheobronchial tree | 3.56e-10 | 3 |
lower respiratory tract | 3.56e-10 | 3 |
subdivision of digestive tract | 1.15e-08 | 114 |
digestive system | 1.94e-08 | 116 |
digestive tract | 1.94e-08 | 116 |
primitive gut | 1.94e-08 | 116 |
endoderm-derived structure | 3.20e-08 | 118 |
endoderm | 3.20e-08 | 118 |
presumptive endoderm | 3.20e-08 | 118 |
thoracic cavity element | 3.55e-08 | 17 |
thoracic segment organ | 3.55e-08 | 17 |
thoracic cavity | 3.55e-08 | 17 |
thoracic segment of trunk | 3.55e-08 | 17 |
respiratory primordium | 3.55e-08 | 17 |
endoderm of foregut | 3.55e-08 | 17 |
small intestine | 3.97e-07 | 4 |
gastrointestinal system | 5.25e-07 | 47 |