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FFCP PHASE1:Mm9::chr1:59030534..59030545,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227154
|EntrezGene=227154
|HGNC=
|HGNC=
|MCL_coexpression_id=369
|TSSclassifier=NA
|UniProt=Q8K4T3
|UniProt=Q8K4T3
|association_with_transcript=119bp_to_NM_172656,uc007bcw.1,uc007bcx.1,uc007bcy.1,uc007bcz.1_5end
|association_with_transcript=119bp_to_NM_172656,uc007bcw.1,uc007bcx.1,uc007bcy.1,uc007bcz.1_5end
|cluster_id=chr1:59030534..59030545,+
|description=CAGE_peak_6_at_Stradb_5end
|description=CAGE_peak_6_at_Stradb_5end
|id=chr1:59030534..59030545,+
|id=chr1:59030534..59030545,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,1.58e-08,6;CL:0000677,1.58e-08,6;CL:0000584,1.58e-08,6;CL:0000066,1.77e-07,25;CL:0000075,3.69e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!1.25e-12!25;UBERON:0002330!1.25e-12!25;UBERON:0002107!1.55e-11!22;UBERON:0007499!1.55e-11!22;UBERON:0006925!1.55e-11!22;UBERON:0009497!1.55e-11!22;UBERON:0000015!1.55e-11!22;UBERON:0002423!1.55e-11!22;UBERON:0006235!1.55e-11!22;UBERON:0008835!1.55e-11!22;UBERON:0003894!1.55e-11!22;UBERON:0004161!1.55e-11!22;UBERON:0008836!1.55e-11!22;UBERON:0009854!1.63e-10!23;UBERON:0009856!1.63e-10!23;UBERON:0004923!5.11e-10!24;UBERON:0005172!7.70e-10!49;UBERON:0005173!7.70e-10!49;UBERON:0002417!7.70e-10!49;UBERON:0000916!7.70e-10!49;UBERON:0000344!2.99e-08!15;UBERON:0003914!2.05e-07!47;UBERON:0001242!4.15e-07!13;UBERON:0000060!4.15e-07!13;UBERON:0001262!4.15e-07!13;UBERON:0004786!4.15e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.21e-19,22;UBERON:0007499,5.21e-19,22;UBERON:0006925,5.21e-19,22;UBERON:0009497,5.21e-19,22;UBERON:0000015,5.21e-19,22;UBERON:0002423,5.21e-19,22;UBERON:0006235,5.21e-19,22;UBERON:0008835,5.21e-19,22;UBERON:0003894,5.21e-19,22;UBERON:0004161,5.21e-19,22;UBERON:0008836,5.21e-19,22;UBERON:0002365,3.12e-18,25;UBERON:0002330,3.12e-18,25;UBERON:0009854,6.24e-18,23;UBERON:0009856,6.24e-18,23;UBERON:0005172,2.57e-15,49;UBERON:0005173,2.57e-15,49;UBERON:0002417,2.57e-15,49;UBERON:0000916,2.57e-15,49;UBERON:0003914,9.80e-13,47;UBERON:0004923,4.35e-11,24;UBERON:0003104,1.82e-10,61;UBERON:0009142,1.82e-10,61;UBERON:0004119,2.76e-10,118;UBERON:0000925,2.76e-10,118;UBERON:0006595,2.76e-10,118;UBERON:0005256,4.85e-10,45;UBERON:0001007,7.52e-10,116;UBERON:0001555,7.52e-10,116;UBERON:0007026,7.52e-10,116;UBERON:0003929,1.08e-09,55;UBERON:0000344,1.37e-09,15;UBERON:0009569,2.47e-09,66;UBERON:0000490,4.18e-09,66;UBERON:0004921,1.21e-08,114;UBERON:0005177,7.77e-08,79;UBERON:0002100,1.07e-07,90;UBERON:0001242,1.56e-07,13;UBERON:0001262,1.56e-07,13;UBERON:0004786,1.56e-07,13
|phase1_expression=0,3.14077866875425,2.27499619694768,5.14189159221611,5.00895729946347,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0.666219523631325,1.61980213911861,0.699561878128147,0.157731082679119,0,0,0.510259740906419,0,0,2.71987118748791,2.06468352960453,2.8711598205751,2.15380998079537,1.939241094173,2.28028103347649,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.664938581433969,0.612508068787107,1.25559489221072,0,1.0470474879476,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0.837548997004143,0,0.15279824777681,0,0,0,0.151452386666368,0.151143120213571,0,3.44169550792555,4.75979933595425,6.47643829965381,5.84798775702902,5.82434953226536,2.66844398250329,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,2.74041311325744,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,2.74738778147832,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0.292780797011547,0,2.29911349687732,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0,0,0.746441823660558,1.51633655060205,1.05220927943237,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.656669856316381,1.13496333364198,1.16959989940266,1.3173006917463,1.74468344388483,0,0,4.62586296177317,2.90895623329899,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.949058123089023,0.988193728344065,0.754005626400808,0.596869416123452,0.38992817423824,0,2.37751854862164,1.7922714592893,0.189667900953082,0.114248512609729,0,2.24016460629846,0.775809948670503,0.49095073923223,1.70738650235495,4.13308414342886,4.39596437955849,4.44229790118482,6.81841042300442,0.83422552858047,1.17935397067922,1.12431056192427,1.01430060694251,1.92941727801933,1.78238096246994,0.863088412352432,1.94562272130042,1.37280706594041,1.43768206527355,1.48856379067401,1.87222603868736,4.04126204715379,4.84373016509163,3.85954817090694,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0,0.163934945376675,3.28212205365685,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,2.1183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,0.874442509889552,0.18542530201051,1.02522528478712,0,0.370389054739423,1.88368457004691,0.956859594047176,2.0590035588587,0,0,0,1.90934123603023,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0.785267825952089,1.42576470620972,4.34937519160848,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0.221985953374065,0.448569283047378,0.671538465456314,0.965947970160952,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.735374033800057,0,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.448176066834085,0.516919220600519,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.591026894253381,0,0.77468420592983,0,0,0.233931608445408,0.429742108096597,0.191288332068843,1.10295709559758,1.39120701372253
|phase1_expression=0,3.14077866875425,2.27499619694768,5.14189159221611,5.00895729946347,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0.666219523631325,1.61980213911861,0.699561878128147,0.157731082679119,0,0,0.510259740906419,0,0,2.71987118748791,2.06468352960453,2.8711598205751,2.15380998079537,1.939241094173,2.28028103347649,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.664938581433969,0.612508068787107,1.25559489221072,0,1.0470474879476,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0.837548997004143,0,0.15279824777681,0,0,0,0.151452386666368,0.151143120213571,0,3.44169550792555,4.75979933595425,6.47643829965381,5.84798775702902,5.82434953226536,2.66844398250329,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,2.74041311325744,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,2.74738778147832,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0.292780797011547,0,2.29911349687732,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0,0,0.746441823660558,1.51633655060205,1.05220927943237,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.656669856316381,1.13496333364198,1.16959989940266,1.3173006917463,1.74468344388483,0,0,4.62586296177317,2.90895623329899,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.949058123089023,0.988193728344065,0.754005626400808,0.596869416123452,0.38992817423824,0,2.37751854862164,1.7922714592893,0.189667900953082,0.114248512609729,0,2.24016460629846,0.775809948670503,0.49095073923223,1.70738650235495,4.13308414342886,4.39596437955849,4.44229790118482,6.81841042300442,0.83422552858047,1.17935397067922,1.12431056192427,1.01430060694251,1.92941727801933,1.78238096246994,0.863088412352432,1.94562272130042,1.37280706594041,1.43768206527355,1.48856379067401,1.87222603868736,4.04126204715379,4.84373016509163,3.85954817090694,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0,0.163934945376675,3.28212205365685,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,2.1183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,0.874442509889552,0.18542530201051,1.02522528478712,0,0.370389054739423,1.88368457004691,0.956859594047176,2.0590035588587,0,0,0,1.90934123603023,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0.785267825952089,1.42576470620972,4.34937519160848,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0.221985953374065,0.448569283047378,0.671538465456314,0.965947970160952,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.735374033800057,0,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.448176066834085,0.516919220600519,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.591026894253381,0,0.77468420592983,0,0,0.233931608445408,0.429742108096597,0.191288332068843,1.10295709559758,1.39120701372253
|short_description=p6@Stradb
|short_description=p6@Stradb
}}
}}

Latest revision as of 06:27, 27 September 2015

Short description:p6@Stradb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Stradb_5end
Coexpression cluster:MCL_coexpression_mm9:369
Association with transcript: 119bp_to_NM_172656, uc007bcw.1, uc007bcx.1, uc007bcy.1, uc007bcz.1_5end
EntrezGene:Stradb
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p6@Stradb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell1.58e-086
gut absorptive cell1.58e-086
enterocyte1.58e-086
epithelial cell1.77e-0725
columnar/cuboidal epithelial cell3.69e-077

Uber anatomy
Ontology termp-valuen
liver5.21e-1922
epithelial sac5.21e-1922
digestive gland5.21e-1922
epithelium of foregut-midgut junction5.21e-1922
anatomical boundary5.21e-1922
hepatobiliary system5.21e-1922
foregut-midgut junction5.21e-1922
hepatic diverticulum5.21e-1922
liver primordium5.21e-1922
septum transversum5.21e-1922
liver bud5.21e-1922
exocrine gland3.12e-1825
exocrine system3.12e-1825
digestive tract diverticulum6.24e-1823
sac6.24e-1823
abdomen element2.57e-1549
abdominal segment element2.57e-1549
abdominal segment of trunk2.57e-1549
abdomen2.57e-1549
epithelial tube9.80e-1347
organ component layer4.35e-1124
mesenchyme1.82e-1061
entire embryonic mesenchyme1.82e-1061
endoderm-derived structure2.76e-10118
endoderm2.76e-10118
presumptive endoderm2.76e-10118
trunk mesenchyme4.85e-1045
digestive system7.52e-10116
digestive tract7.52e-10116
primitive gut7.52e-10116
gut epithelium1.08e-0955
mucosa1.37e-0915
subdivision of trunk2.47e-0966
unilaminar epithelium4.18e-0966
subdivision of digestive tract1.21e-08114
trunk region element7.77e-0879
trunk1.07e-0790
intestinal mucosa1.56e-0713
wall of intestine1.56e-0713
gastrointestinal system mucosa1.56e-0713
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