FFCP PHASE1:Mm9::chr1:58859438..58859481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12370 | |EntrezGene=12370 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=O89110,Q3U607 | |UniProt=O89110,Q3U607 | ||
|association_with_transcript=92bp_to_ENSMUST00000165549,NM_001080126,uc007bct.1_5end | |association_with_transcript=92bp_to_ENSMUST00000165549,NM_001080126,uc007bct.1_5end | ||
|cluster_id=chr1:58859438..58859481,+ | |||
|description=CAGE_peak_3_at_Casp8_5end | |description=CAGE_peak_3_at_Casp8_5end | ||
|id=chr1:58859438..58859481,+ | |id=chr1:58859438..58859481,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.74e-08!32;CL:0002032!1.74e-08!32;CL:0000037!1.74e-08!32;CL:0000566!1.74e-08!32;CL:0000837!1.74e-08!32;CL:0000838!3.21e-08!12;CL:0000084!1.09e-07!11;CL:0000827!1.09e-07!11;CL:0000542!4.12e-07!13;CL:0000051!4.12e-07!13;CL:0000738!4.42e-07!17;CL:0002087!4.42e-07!17 | |ontology_enrichment_celltype=CL:0000988!1.74e-08!32;CL:0002032!1.74e-08!32;CL:0000037!1.74e-08!32;CL:0000566!1.74e-08!32;CL:0000837!1.74e-08!32;CL:0000838!3.21e-08!12;CL:0000084!1.09e-07!11;CL:0000827!1.09e-07!11;CL:0000542!4.12e-07!13;CL:0000051!4.12e-07!13;CL:0000738!4.42e-07!17;CL:0002087!4.42e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.99e-09,32;CL:0002032,2.99e-09,32;CL:0000037,2.99e-09,32;CL:0000837,2.99e-09,32;CL:0000838,3.79e-09,12;CL:0000084,1.52e-08,11;CL:0000827,1.52e-08,11;CL:0000542,5.79e-08,13;CL:0000051,5.79e-08,13;CL:0000738,1.72e-07,17;CL:0002087,1.72e-07,17;CL:0000791,2.79e-07,9;CL:0000789,2.79e-07,9;CL:0002420,2.79e-07,9;CL:0002419,2.79e-07,9;CL:0000790,2.79e-07,9;CL:0002031,9.23e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.34e-12!48;UBERON:0002390!1.12e-10!45;UBERON:0003061!1.12e-10!45;UBERON:0002405!1.69e-10!70;UBERON:0005911!1.36e-07!69;UBERON:0001007!2.02e-07!128;UBERON:0001555!2.02e-07!128;UBERON:0007026!2.02e-07!128;UBERON:0004119!2.18e-07!130;UBERON:0000925!2.18e-07!130;UBERON:0006595!2.18e-07!130;UBERON:0004921!8.45e-07!126;UBERON:0004185!8.45e-07!126 | |ontology_enrichment_uberon=UBERON:0002193!3.34e-12!48;UBERON:0002390!1.12e-10!45;UBERON:0003061!1.12e-10!45;UBERON:0002405!1.69e-10!70;UBERON:0005911!1.36e-07!69;UBERON:0001007!2.02e-07!128;UBERON:0001555!2.02e-07!128;UBERON:0007026!2.02e-07!128;UBERON:0004119!2.18e-07!130;UBERON:0000925!2.18e-07!130;UBERON:0006595!2.18e-07!130;UBERON:0004921!8.45e-07!126;UBERON:0004185!8.45e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.64e-13,48;UBERON:0002405,1.64e-13,48;UBERON:0002390,8.78e-12,45;UBERON:0003061,8.78e-12,45;UBERON:0001007,3.40e-09,116;UBERON:0001555,3.40e-09,116;UBERON:0007026,3.40e-09,116;UBERON:0004119,6.53e-09,118;UBERON:0000925,6.53e-09,118;UBERON:0006595,6.53e-09,118;UBERON:0000077,8.01e-09,35;UBERON:0005911,1.83e-08,69;UBERON:0004921,1.96e-08,114;UBERON:0004177,2.49e-08,29;UBERON:0005057,2.49e-08,29;UBERON:0003929,2.20e-07,55;UBERON:0006562,6.33e-07,24;UBERON:0001557,6.33e-07,24;UBERON:0001042,6.33e-07,24;UBERON:0008814,6.33e-07,24;UBERON:0009145,6.33e-07,24;UBERON:0003408,6.66e-07,24 | |||
|phase1_expression=0.480446541314382,6.63053274514786,5.0049916332849,1.51232105653415,1.50268718983904,5.54001597309236,6.54115393667472,18.2063886052623,16.8946466582,12.4054198950657,9.24577028417727,8.13676021752431,28.9329233583738,22.2922026168443,0.999329285446988,4.45445588257617,0.699561878128147,20.6627718309646,16.3166175990829,12.7316895539409,1.78590909317247,13.8014422169231,18.0227854505865,10.5594999043648,9.1763712426868,8.03924749761028,6.03066794622705,5.817723282519,3.6104449696711,3.02436155711917,6.43018480900384,0,0,0,2.02196133825892,2.32728503501889,1.22501613757421,24.2748345827406,23.440060335714,28.7938059185589,21.1763335691165,26.6387739133794,21.8479658864019,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,13.4226084846189,18.1340535502836,18.1490651536931,0.257259436035947,0.85960031981627,0,0,0,0,0,0,4.49949858640699,2.96659908770092,3.5524005747305,0.299600110518405,0.768436610643109,0.207379224616955,0,0.420649922702764,0,0.883474163806454,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,1.37518422999129,0.294628585473668,0.711858403995515,0,0.37863096666592,0.226714680320357,7.8263411949453,2.58127163094416,0,0,0.649776417447669,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.31133251185274,33.9208627577795,2.22663208597237,0,0.608930956624282,0.691846491768175,0.60289056221049,1.29347577849275,1.13099932196708,0,5.20557684911682,5.30766331169925,1.94120219936891,4.41683036920787,7.27312879702833,1.86391761218122,0.292780797011547,0.209446706813455,3.0654846625031,11.1428065790506,10.7982491578813,11.9446013448681,1.19832511523858,0,0,1.39059456153821,0.511430914660661,1.24672826735736,0.648965052271031,1.12023300235348,6.96679035416521,1.26361379216837,1.47309299120532,0.390361328888111,0,0,0,0.340182495756639,0.384341160854549,0.187403449119458,1.29351685369508,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,1.85203922767149,0,18.9597560574573,9.52187256324446,10.7982129770325,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,1.80584210487005,1.4592385718254,1.90059983652932,2.41505126820156,1.34206418760372,1.05144974282064,0.308713837137853,9.58214470653014,3.43785736662608,0.213288250535234,0.696710015581316,0.38660238396628,0,0.889512175379481,0.380451252225118,3.79623249235609,0.164698954724011,1.25667604400135,0.596869416123452,0.779856348476481,2.69645822596266,3.02593269824572,1.39398891278057,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.771494018793504,1.3279672796094,1.91893192373483,0.941992367048249,1.48076596706161,1.1858105083486,0.333690211432188,0.393117990226406,0.899448449539415,1.62288097110802,1.68824011826692,1.52775511068852,1.72617682470486,2.10775794807546,1.37280706594041,4.31304619582064,1.11642284300551,1.24815069245824,2.27320990152401,1.4351793081753,2.8946611281802,10.7156850296631,0.37898282354097,0.651859905768103,0.678980343100753,0.704070744865506,2.01007508930179,2.61848004974615,1.56106918286239,3.31033802623001,2.21464689648775,3.02964060449226,4.42430949732493,5.69860440157455,5.20736610893442,21.1107797514981,29.914812610029,3.44234991113325,1.65562047782839,0.481651769963376,0.820481806145422,0,1.51482556322624,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,1.70328102249922,0.35613120733451,0.651547837414304,2.8044920905331,1.32745138339963,0,0,0.943025398779491,0.295301892880773,1.22974059177571,1.55056975900933,1.09060118843252,1.06949213515416,1.26414703174326,0,1.03135543248187,3.40439605753788,0.36012218806262,0.258717367565509,0.643011105094777,0.886701168211368,1.78368817602071,0.493647061806363,0,1.17335854031855,0.847328283455281,3.96951116498931,2.4732937941222,3.39075296061402,1.08563264870681,1.3130957840345,1.14898629821543,1.45740418314925,1.29797711407357,6.32222258952055,1.44470807574256,3.33350149265481,1.88368457004691,4.78429797023588,6.63456702298916,14.4481665494777,14.6949024939841,14.2345973018557,1.90934123603023,0.316335993581135,0.609958401380546,0.648032044930808,0.209088296014469,0.436725127492355,0.404593039154462,1.23980183588004,1.83229159388821,1.94422459937689,2.4853572523477,0,0.598066184175915,0.165458490457098,0.583353565032143,0.387479470433193,0.168956125490778,0.704143431874524,0.651021924219751,1.04859344425711,0.483168241652012,0.864090018773596,20.2247117202034,0,0.513554785824136,3.11809975146708,2.8644271306797,3.77494574084403,5.16840432935866,4.72606486958647,9.18794694528143,8.30654192539498,12.6032731421051,14.4237663494834,18.0878262283819,18.700304349051,2.72076460338254,0,0,0,3.09103350451505,4.87974436173073,5.86085197655248,1.92931541171159,6.01886524842436,1.6942555278512,0.460325236507177,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0.103787347584177,0.399024873401031,0,0.486213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| |phase1_expression=0.480446541314382,6.63053274514786,5.0049916332849,1.51232105653415,1.50268718983904,5.54001597309236,6.54115393667472,18.2063886052623,16.8946466582,12.4054198950657,9.24577028417727,8.13676021752431,28.9329233583738,22.2922026168443,0.999329285446988,4.45445588257617,0.699561878128147,20.6627718309646,16.3166175990829,12.7316895539409,1.78590909317247,13.8014422169231,18.0227854505865,10.5594999043648,9.1763712426868,8.03924749761028,6.03066794622705,5.817723282519,3.6104449696711,3.02436155711917,6.43018480900384,0,0,0,2.02196133825892,2.32728503501889,1.22501613757421,24.2748345827406,23.440060335714,28.7938059185589,21.1763335691165,26.6387739133794,21.8479658864019,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,13.4226084846189,18.1340535502836,18.1490651536931,0.257259436035947,0.85960031981627,0,0,0,0,0,0,4.49949858640699,2.96659908770092,3.5524005747305,0.299600110518405,0.768436610643109,0.207379224616955,0,0.420649922702764,0,0.883474163806454,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,1.37518422999129,0.294628585473668,0.711858403995515,0,0.37863096666592,0.226714680320357,7.8263411949453,2.58127163094416,0,0,0.649776417447669,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.31133251185274,33.9208627577795,2.22663208597237,0,0.608930956624282,0.691846491768175,0.60289056221049,1.29347577849275,1.13099932196708,0,5.20557684911682,5.30766331169925,1.94120219936891,4.41683036920787,7.27312879702833,1.86391761218122,0.292780797011547,0.209446706813455,3.0654846625031,11.1428065790506,10.7982491578813,11.9446013448681,1.19832511523858,0,0,1.39059456153821,0.511430914660661,1.24672826735736,0.648965052271031,1.12023300235348,6.96679035416521,1.26361379216837,1.47309299120532,0.390361328888111,0,0,0,0.340182495756639,0.384341160854549,0.187403449119458,1.29351685369508,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,1.85203922767149,0,18.9597560574573,9.52187256324446,10.7982129770325,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,1.80584210487005,1.4592385718254,1.90059983652932,2.41505126820156,1.34206418760372,1.05144974282064,0.308713837137853,9.58214470653014,3.43785736662608,0.213288250535234,0.696710015581316,0.38660238396628,0,0.889512175379481,0.380451252225118,3.79623249235609,0.164698954724011,1.25667604400135,0.596869416123452,0.779856348476481,2.69645822596266,3.02593269824572,1.39398891278057,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.771494018793504,1.3279672796094,1.91893192373483,0.941992367048249,1.48076596706161,1.1858105083486,0.333690211432188,0.393117990226406,0.899448449539415,1.62288097110802,1.68824011826692,1.52775511068852,1.72617682470486,2.10775794807546,1.37280706594041,4.31304619582064,1.11642284300551,1.24815069245824,2.27320990152401,1.4351793081753,2.8946611281802,10.7156850296631,0.37898282354097,0.651859905768103,0.678980343100753,0.704070744865506,2.01007508930179,2.61848004974615,1.56106918286239,3.31033802623001,2.21464689648775,3.02964060449226,4.42430949732493,5.69860440157455,5.20736610893442,21.1107797514981,29.914812610029,3.44234991113325,1.65562047782839,0.481651769963376,0.820481806145422,0,1.51482556322624,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,1.70328102249922,0.35613120733451,0.651547837414304,2.8044920905331,1.32745138339963,0,0,0.943025398779491,0.295301892880773,1.22974059177571,1.55056975900933,1.09060118843252,1.06949213515416,1.26414703174326,0,1.03135543248187,3.40439605753788,0.36012218806262,0.258717367565509,0.643011105094777,0.886701168211368,1.78368817602071,0.493647061806363,0,1.17335854031855,0.847328283455281,3.96951116498931,2.4732937941222,3.39075296061402,1.08563264870681,1.3130957840345,1.14898629821543,1.45740418314925,1.29797711407357,6.32222258952055,1.44470807574256,3.33350149265481,1.88368457004691,4.78429797023588,6.63456702298916,14.4481665494777,14.6949024939841,14.2345973018557,1.90934123603023,0.316335993581135,0.609958401380546,0.648032044930808,0.209088296014469,0.436725127492355,0.404593039154462,1.23980183588004,1.83229159388821,1.94422459937689,2.4853572523477,0,0.598066184175915,0.165458490457098,0.583353565032143,0.387479470433193,0.168956125490778,0.704143431874524,0.651021924219751,1.04859344425711,0.483168241652012,0.864090018773596,20.2247117202034,0,0.513554785824136,3.11809975146708,2.8644271306797,3.77494574084403,5.16840432935866,4.72606486958647,9.18794694528143,8.30654192539498,12.6032731421051,14.4237663494834,18.0878262283819,18.700304349051,2.72076460338254,0,0,0,3.09103350451505,4.87974436173073,5.86085197655248,1.92931541171159,6.01886524842436,1.6942555278512,0.460325236507177,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0.103787347584177,0.399024873401031,0,0.486213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| ||
|short_description=p3@Casp8 | |short_description=p3@Casp8 | ||
}} | }} |
Latest revision as of 06:22, 27 September 2015
Short description: | p3@Casp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Casp8_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 92bp_to_ENSMUST00000165549, NM_001080126, uc007bct.1_5end |
EntrezGene: | Casp8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.99e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.99e-09 | 32 |
hematopoietic stem cell | 2.99e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.99e-09 | 32 |
lymphoid lineage restricted progenitor cell | 3.79e-09 | 12 |
T cell | 1.52e-08 | 11 |
pro-T cell | 1.52e-08 | 11 |
lymphocyte | 5.79e-08 | 13 |
common lymphoid progenitor | 5.79e-08 | 13 |
leukocyte | 1.72e-07 | 17 |
nongranular leukocyte | 1.72e-07 | 17 |
mature alpha-beta T cell | 2.79e-07 | 9 |
alpha-beta T cell | 2.79e-07 | 9 |
immature T cell | 2.79e-07 | 9 |
mature T cell | 2.79e-07 | 9 |
immature alpha-beta T cell | 2.79e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 9.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.64e-13 | 48 |
immune system | 1.64e-13 | 48 |
hematopoietic system | 8.78e-12 | 45 |
blood island | 8.78e-12 | 45 |
digestive system | 3.40e-09 | 116 |
digestive tract | 3.40e-09 | 116 |
primitive gut | 3.40e-09 | 116 |
endoderm-derived structure | 6.53e-09 | 118 |
endoderm | 6.53e-09 | 118 |
presumptive endoderm | 6.53e-09 | 118 |
mixed endoderm/mesoderm-derived structure | 8.01e-09 | 35 |
endo-epithelium | 1.83e-08 | 69 |
subdivision of digestive tract | 1.96e-08 | 114 |
hemopoietic organ | 2.49e-08 | 29 |
immune organ | 2.49e-08 | 29 |
gut epithelium | 2.20e-07 | 55 |
pharynx | 6.33e-07 | 24 |
upper respiratory tract | 6.33e-07 | 24 |
chordate pharynx | 6.33e-07 | 24 |
pharyngeal arch system | 6.33e-07 | 24 |
pharyngeal region of foregut | 6.33e-07 | 24 |
gland of gut | 6.66e-07 | 24 |