FFCP PHASE1:Mm9::chr6:41555147..41555174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13848 | |EntrezGene=13848 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=O08644,F8WHT4 | |UniProt=O08644,F8WHT4 | ||
|association_with_transcript=-306bp_to_ENSMUST00000031903,ENSMUST00000114732,ENSMUST00000114733,NM_001146351,NM_007680,uc009bqa.2,uc009bqb.2_5end | |association_with_transcript=-306bp_to_ENSMUST00000031903,ENSMUST00000114732,ENSMUST00000114733,NM_001146351,NM_007680,uc009bqa.2,uc009bqb.2_5end | ||
|cluster_id=chr6:41555147..41555174,+ | |||
|description=CAGE_peak_3_at_Ephb6_5end | |description=CAGE_peak_3_at_Ephb6_5end | ||
|id=chr6:41555147..41555174,+ | |id=chr6:41555147..41555174,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.87e-10!23;CL:0000337!1.87e-10!23;CL:0000540!2.02e-07!33;CL:0000047!2.02e-07!33;CL:0000031!2.02e-07!33;CL:0000404!2.02e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.87e-10!23;CL:0000337!1.87e-10!23;CL:0000540!2.02e-07!33;CL:0000047!2.02e-07!33;CL:0000031!2.02e-07!33;CL:0000404!2.02e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.09e-16,23;CL:0000337,2.09e-16,23;CL:0000540,3.43e-10,33;CL:0000047,3.43e-10,33;CL:0000031,3.43e-10,33;CL:0000404,3.43e-10,33;CL:0000393,1.54e-07,39;CL:0000211,1.54e-07,39;CL:0000221,2.24e-07,44;CL:0000133,2.24e-07,44;CL:0002319,6.77e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.19e-23!94;UBERON:0007811!1.47e-22!86;UBERON:0001049!1.82e-20!52;UBERON:0005068!1.82e-20!52;UBERON:0006241!1.82e-20!52;UBERON:0007135!1.82e-20!52;UBERON:0002020!1.83e-18!34;UBERON:0001017!7.32e-18!73;UBERON:0005743!7.32e-18!73;UBERON:0000955!1.14e-17!50;UBERON:0006238!1.14e-17!50;UBERON:0002616!3.61e-17!49;UBERON:0000073!3.70e-17!75;UBERON:0001016!3.70e-17!75;UBERON:0002346!6.18e-17!71;UBERON:0003075!6.18e-17!71;UBERON:0007284!6.18e-17!71;UBERON:0003080!9.75e-17!40;UBERON:0000033!3.36e-16!63;UBERON:0002780!4.33e-16!39;UBERON:0001890!4.33e-16!39;UBERON:0006240!4.33e-16!39;UBERON:0004121!8.46e-16!102;UBERON:0000924!8.46e-16!102;UBERON:0006601!8.46e-16!102;UBERON:0003056!9.22e-16!49;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0000956!1.76e-11!21;UBERON:0001869!1.76e-11!21;UBERON:0000203!1.76e-11!21;UBERON:0002619!2.20e-09!17;UBERON:0002021!2.68e-08!10;UBERON:0000411!2.68e-08!10;UBERON:0001950!2.68e-08!10;UBERON:0000064!4.20e-08!99;UBERON:0000475!2.96e-07!200 | |ontology_enrichment_uberon=UBERON:0000153!3.19e-23!94;UBERON:0007811!1.47e-22!86;UBERON:0001049!1.82e-20!52;UBERON:0005068!1.82e-20!52;UBERON:0006241!1.82e-20!52;UBERON:0007135!1.82e-20!52;UBERON:0002020!1.83e-18!34;UBERON:0001017!7.32e-18!73;UBERON:0005743!7.32e-18!73;UBERON:0000955!1.14e-17!50;UBERON:0006238!1.14e-17!50;UBERON:0002616!3.61e-17!49;UBERON:0000073!3.70e-17!75;UBERON:0001016!3.70e-17!75;UBERON:0002346!6.18e-17!71;UBERON:0003075!6.18e-17!71;UBERON:0007284!6.18e-17!71;UBERON:0003080!9.75e-17!40;UBERON:0000033!3.36e-16!63;UBERON:0002780!4.33e-16!39;UBERON:0001890!4.33e-16!39;UBERON:0006240!4.33e-16!39;UBERON:0004121!8.46e-16!102;UBERON:0000924!8.46e-16!102;UBERON:0006601!8.46e-16!102;UBERON:0003056!9.22e-16!49;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0000956!1.76e-11!21;UBERON:0001869!1.76e-11!21;UBERON:0000203!1.76e-11!21;UBERON:0002619!2.20e-09!17;UBERON:0002021!2.68e-08!10;UBERON:0000411!2.68e-08!10;UBERON:0001950!2.68e-08!10;UBERON:0000064!4.20e-08!99;UBERON:0000475!2.96e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.90e-28,34;UBERON:0000073,9.29e-26,54;UBERON:0001049,1.35e-25,52;UBERON:0005068,1.35e-25,52;UBERON:0006241,1.35e-25,52;UBERON:0007135,1.35e-25,52;UBERON:0003528,6.62e-24,29;UBERON:0002791,6.62e-24,29;UBERON:0001893,6.62e-24,29;UBERON:0001017,9.30e-22,73;UBERON:0000955,2.45e-21,47;UBERON:0006238,2.45e-21,47;UBERON:0003080,4.03e-21,40;UBERON:0001016,1.01e-20,75;UBERON:0010371,1.22e-20,73;UBERON:0002616,1.38e-20,46;UBERON:0002780,3.80e-20,39;UBERON:0001890,3.80e-20,39;UBERON:0006240,3.80e-20,39;UBERON:0002346,6.38e-19,64;UBERON:0003075,6.38e-19,64;UBERON:0007284,6.38e-19,64;UBERON:0004121,9.48e-18,95;UBERON:0000924,9.48e-18,95;UBERON:0006601,9.48e-18,95;UBERON:0000956,2.39e-17,21;UBERON:0001869,2.39e-17,21;UBERON:0000203,2.39e-17,21;UBERON:0003056,5.09e-16,49;UBERON:0002619,5.06e-14,17;UBERON:0002021,3.05e-12,10;UBERON:0000411,3.05e-12,10;UBERON:0001950,3.05e-12,10;UBERON:0010314,2.81e-10,92;UBERON:0000119,6.05e-08,176;UBERON:0000483,9.44e-08,174;UBERON:0002420,1.18e-07,8;UBERON:0007245,1.18e-07,8;UBERON:0010009,1.18e-07,8;UBERON:0010011,1.18e-07,8;UBERON:0000454,1.18e-07,8;UBERON:0002370,5.93e-07,23;UBERON:0000974,5.93e-07,23;UBERON:0004807,5.93e-07,23;UBERON:0005058,5.93e-07,23;UBERON:0003351,5.93e-07,23;UBERON:0009113,5.93e-07,23;UBERON:0003295,5.93e-07,23;UBERON:0009722,5.93e-07,23;UBERON:0005562,5.93e-07,23;UBERON:0007690,5.93e-07,23 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,4.00282302668886,0.985521055061667,0.936258105287974,1.19852577757853,0.717949430958028,4.62241970814255,3.14713448708391,0,0,0,0,0.137114433605739,0,1.10556277196391,0.893618560807968,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.550640256485045,0.782391344348039,0.218025156380447,0.219686182734472,1.55543919259427,0.139986421625363,0,0,5.07753499407941,3.6970317905671,0,0.573066879877513,0.515672092277442,2.42779753031517,5.28990979272033,1.90149421051854,0,1.77858959222228,0.449949858640699,0,1.4209602298922,0.299600110518405,0.768436610643109,2.7996195323289,3.51015439662396,3.36519938162211,3.42781181284564,3.97563373712904,1.71487118900936,1.0543001812006,2.75765635983006,0,2.42605942361857,3.84016333140609,3.56092976871523,4.84884511092771,3.64639359389732,2.23346399201105,5.6276261003168,2.29197371665215,3.53554302568401,3.27454865837937,4.47358669980721,0.227178579999552,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,0.681721290312231,0.519572009205738,0.70667914902068,2.67602497575693,2.56652954828636,0,0,0,0.760079596425296,0,0.22836775943812,0.258937883647172,0.593768556259299,0,0.608930956624282,0.461230994512117,0.60289056221049,0.117588707135705,0.628332956648377,0.494389935468748,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,0.585561594023094,1.25668024088073,0,0.239630249011841,0.599902730993408,0,5.39246301857362,3.66000482254901,2.89005009859588,9.03886464999838,16.3657892691412,1.87009240103604,4.05603157669394,1.01839363850316,0.373220911830279,0.252722758433675,0.841767423545896,0,0.919608417733892,0.540186389416048,0.753524089178575,1.29269348387523,0.640568601424249,0.843315521037559,0.517406741478031,0.862271971731369,1.51284864134255,1.23165786914764,1.53437012699302,0.834141747676794,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,2.3131894342054,8.12946437796347,0,0,0.853153002140936,0.232236671860439,0.515469845288373,0,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.581857461502877,0.49095073923223,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,2.40825884981688,2.93029216480508,0,0.252470927204373,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0.809621403349789,0.584511715822624,0,2.89189184779626,0.567760340833074,0.890328018336276,1.79175655288934,1.81467135269789,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0.614870295887855,0.516856586336442,0,1.06949213515416,0.632073515871632,0,0,0.680879211507576,1.26042765821917,0.646793418913773,1.07168517515796,0.709360934569094,0.535106452806212,0.822745103010605,0.608929898229199,0,0.21183207086382,0,1.15420377059036,0.807322133479528,1.44751019827574,2.02932984805332,1.96969079694074,0,2.41052892613663,0.683483523191411,0.412773735926445,0,0,0.410082683163076,0,0.849892149969277,0.69975726161829,0.690999869022119,0,0.316335993581135,0.406638934253697,0.432021363287205,0.209088296014469,0.87345025498471,0.809186078308924,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.330916980914195,1.16670713006429,0.774958940866387,0.844780627453891,0.469428954583016,0.781226309063701,0.629156066554265,0.241584120826006,0.576060012515731,3.79213344753814,0.810900861160657,0.205421914329655,1.55904987573354,1.61124026100733,1.58945083825012,2.76449533895928,2.95379054349154,2.42319479875554,3.81034033274999,2.82313318383153,3.70339946811059,2.5977197242889,4.20756847853648,0,0,0,0,0.965947970160952,0.563047426353546,0.73260649706906,0.643105137237198,3.00943262421218,17.5073071211291,14.7304075682297,16.6139698897425,11.8578695817144,12.3314853558716,11.3309084608455,13.5004500046361,11.2580300806055,9.9691329976525,12.9440077937955,0.103787347584177,1.19707462020309,1.19513524027894,0.972426868273176,0.419226325255965,0.367687016900028,0.888986911206461,1.44224540067226,1.28367683836726,0.252697211763798,0.50695859978048,1.32038438970253,0.655490552289177,1.40855335290712,0.918967503289812,0.476293691283074,1.27472758539341,0.578727661391115,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,1.1921809497366,1.45346416632329,1.03520318456864,1.4384483341585,0.914639864363863,1.57841826862706,0.679020569229309,1.68342681497322,1.30498519936592,0.8865403413800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| |phase1_expression=1.76163731815273,0,0,0,0,0,0,4.00282302668886,0.985521055061667,0.936258105287974,1.19852577757853,0.717949430958028,4.62241970814255,3.14713448708391,0,0,0,0,0.137114433605739,0,1.10556277196391,0.893618560807968,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.550640256485045,0.782391344348039,0.218025156380447,0.219686182734472,1.55543919259427,0.139986421625363,0,0,5.07753499407941,3.6970317905671,0,0.573066879877513,0.515672092277442,2.42779753031517,5.28990979272033,1.90149421051854,0,1.77858959222228,0.449949858640699,0,1.4209602298922,0.299600110518405,0.768436610643109,2.7996195323289,3.51015439662396,3.36519938162211,3.42781181284564,3.97563373712904,1.71487118900936,1.0543001812006,2.75765635983006,0,2.42605942361857,3.84016333140609,3.56092976871523,4.84884511092771,3.64639359389732,2.23346399201105,5.6276261003168,2.29197371665215,3.53554302568401,3.27454865837937,4.47358669980721,0.227178579999552,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,0.681721290312231,0.519572009205738,0.70667914902068,2.67602497575693,2.56652954828636,0,0,0,0.760079596425296,0,0.22836775943812,0.258937883647172,0.593768556259299,0,0.608930956624282,0.461230994512117,0.60289056221049,0.117588707135705,0.628332956648377,0.494389935468748,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,0.585561594023094,1.25668024088073,0,0.239630249011841,0.599902730993408,0,5.39246301857362,3.66000482254901,2.89005009859588,9.03886464999838,16.3657892691412,1.87009240103604,4.05603157669394,1.01839363850316,0.373220911830279,0.252722758433675,0.841767423545896,0,0.919608417733892,0.540186389416048,0.753524089178575,1.29269348387523,0.640568601424249,0.843315521037559,0.517406741478031,0.862271971731369,1.51284864134255,1.23165786914764,1.53437012699302,0.834141747676794,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,2.3131894342054,8.12946437796347,0,0,0.853153002140936,0.232236671860439,0.515469845288373,0,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.581857461502877,0.49095073923223,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,2.40825884981688,2.93029216480508,0,0.252470927204373,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0.809621403349789,0.584511715822624,0,2.89189184779626,0.567760340833074,0.890328018336276,1.79175655288934,1.81467135269789,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0.614870295887855,0.516856586336442,0,1.06949213515416,0.632073515871632,0,0,0.680879211507576,1.26042765821917,0.646793418913773,1.07168517515796,0.709360934569094,0.535106452806212,0.822745103010605,0.608929898229199,0,0.21183207086382,0,1.15420377059036,0.807322133479528,1.44751019827574,2.02932984805332,1.96969079694074,0,2.41052892613663,0.683483523191411,0.412773735926445,0,0,0.410082683163076,0,0.849892149969277,0.69975726161829,0.690999869022119,0,0.316335993581135,0.406638934253697,0.432021363287205,0.209088296014469,0.87345025498471,0.809186078308924,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.330916980914195,1.16670713006429,0.774958940866387,0.844780627453891,0.469428954583016,0.781226309063701,0.629156066554265,0.241584120826006,0.576060012515731,3.79213344753814,0.810900861160657,0.205421914329655,1.55904987573354,1.61124026100733,1.58945083825012,2.76449533895928,2.95379054349154,2.42319479875554,3.81034033274999,2.82313318383153,3.70339946811059,2.5977197242889,4.20756847853648,0,0,0,0,0.965947970160952,0.563047426353546,0.73260649706906,0.643105137237198,3.00943262421218,17.5073071211291,14.7304075682297,16.6139698897425,11.8578695817144,12.3314853558716,11.3309084608455,13.5004500046361,11.2580300806055,9.9691329976525,12.9440077937955,0.103787347584177,1.19707462020309,1.19513524027894,0.972426868273176,0.419226325255965,0.367687016900028,0.888986911206461,1.44224540067226,1.28367683836726,0.252697211763798,0.50695859978048,1.32038438970253,0.655490552289177,1.40855335290712,0.918967503289812,0.476293691283074,1.27472758539341,0.578727661391115,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,1.1921809497366,1.45346416632329,1.03520318456864,1.4384483341585,0.914639864363863,1.57841826862706,0.679020569229309,1.68342681497322,1.30498519936592,0.8865403413800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| ||
|short_description=p3@Ephb6 | |short_description=p3@Ephb6 | ||
}} | }} |
Latest revision as of 05:32, 27 September 2015
Short description: | p3@Ephb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ephb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -306bp_to_ENSMUST00000031903, ENSMUST00000114732, ENSMUST00000114733, NM_001146351, NM_007680, uc009bqa.2, uc009bqb.2_5end |
EntrezGene: | Ephb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.09e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-16 | 23 |
neuron | 3.43e-10 | 33 |
neuronal stem cell | 3.43e-10 | 33 |
neuroblast | 3.43e-10 | 33 |
electrically signaling cell | 3.43e-10 | 33 |
electrically responsive cell | 1.54e-07 | 39 |
electrically active cell | 1.54e-07 | 39 |
ectodermal cell | 2.24e-07 | 44 |
neurectodermal cell | 2.24e-07 | 44 |
neural cell | 6.77e-07 | 43 |