FFCP PHASE1:Mm9::chr1:52557197..52557293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17936 | |EntrezGene=17936 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q61122 | |UniProt=Q61122 | ||
|association_with_transcript=0bp_to_NM_008667,uc007ayh.2_5end | |association_with_transcript=0bp_to_NM_008667,uc007ayh.2_5end | ||
|cluster_id=chr1:52557197..52557293,- | |||
|description=CAGE_peak_1_at_Nab1_5end | |description=CAGE_peak_1_at_Nab1_5end | ||
|id=chr1:52557197..52557293,- | |id=chr1:52557197..52557293,- | ||
|ontology_enrichment_celltype=CL:0000223!4.75e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.75e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.63e-11!130;UBERON:0000925!3.63e-11!130;UBERON:0006595!3.63e-11!130;UBERON:0001007!3.83e-11!128;UBERON:0001555!3.83e-11!128;UBERON:0007026!3.83e-11!128;UBERON:0004921!7.12e-11!126;UBERON:0004185!7.12e-11!126;UBERON:0003104!5.29e-10!131;UBERON:0009142!5.29e-10!131;UBERON:0000077!1.22e-09!97;UBERON:0000926!1.60e-09!193;UBERON:0004120!1.60e-09!193;UBERON:0006603!1.60e-09!193;UBERON:0002365!1.88e-09!25;UBERON:0002330!1.88e-09!25;UBERON:0005256!2.73e-09!47;UBERON:0002107!4.78e-09!22;UBERON:0007499!4.78e-09!22;UBERON:0006925!4.78e-09!22;UBERON:0009497!4.78e-09!22;UBERON:0000015!4.78e-09!22;UBERON:0002423!4.78e-09!22;UBERON:0006235!4.78e-09!22;UBERON:0008835!4.78e-09!22;UBERON:0003894!4.78e-09!22;UBERON:0004161!4.78e-09!22;UBERON:0008836!4.78e-09!22;UBERON:0001041!5.63e-09!92;UBERON:0003914!1.31e-08!47;UBERON:0009854!2.90e-08!23;UBERON:0009856!2.90e-08!23;UBERON:0000466!8.76e-08!79;UBERON:0002100!1.71e-07!98;UBERON:0000490!4.46e-07!66;UBERON:0005911!9.33e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.06e-11,90;UBERON:0005256,1.22e-10,45;UBERON:0002365,1.88e-09,25;UBERON:0002330,1.88e-09,25;UBERON:0002107,4.78e-09,22;UBERON:0007499,4.78e-09,22;UBERON:0006925,4.78e-09,22;UBERON:0009497,4.78e-09,22;UBERON:0000015,4.78e-09,22;UBERON:0002423,4.78e-09,22;UBERON:0006235,4.78e-09,22;UBERON:0008835,4.78e-09,22;UBERON:0003894,4.78e-09,22;UBERON:0004161,4.78e-09,22;UBERON:0008836,4.78e-09,22;UBERON:0004119,7.51e-09,118;UBERON:0000925,7.51e-09,118;UBERON:0006595,7.51e-09,118;UBERON:0001007,7.81e-09,116;UBERON:0001555,7.81e-09,116;UBERON:0007026,7.81e-09,116;UBERON:0003914,1.31e-08,47;UBERON:0004921,1.35e-08,114;UBERON:0005177,2.08e-08,79;UBERON:0009854,2.90e-08,23;UBERON:0009856,2.90e-08,23;UBERON:0000490,4.45e-07,66;UBERON:0003104,4.79e-07,61;UBERON:0009142,4.79e-07,61;UBERON:0001041,6.52e-07,80;UBERON:0005911,9.33e-07,69 | |||
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| ||
|short_description=p1@Nab1 | |short_description=p1@Nab1 | ||
}} | }} |
Latest revision as of 05:06, 27 September 2015
Short description: | p1@Nab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nab1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_008667, uc007ayh.2_5end |
EntrezGene: | Nab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.06e-11 | 90 |
trunk mesenchyme | 1.22e-10 | 45 |
exocrine gland | 1.88e-09 | 25 |
exocrine system | 1.88e-09 | 25 |
liver | 4.78e-09 | 22 |
epithelial sac | 4.78e-09 | 22 |
digestive gland | 4.78e-09 | 22 |
epithelium of foregut-midgut junction | 4.78e-09 | 22 |
anatomical boundary | 4.78e-09 | 22 |
hepatobiliary system | 4.78e-09 | 22 |
foregut-midgut junction | 4.78e-09 | 22 |
hepatic diverticulum | 4.78e-09 | 22 |
liver primordium | 4.78e-09 | 22 |
septum transversum | 4.78e-09 | 22 |
liver bud | 4.78e-09 | 22 |
endoderm-derived structure | 7.51e-09 | 118 |
endoderm | 7.51e-09 | 118 |
presumptive endoderm | 7.51e-09 | 118 |
digestive system | 7.81e-09 | 116 |
digestive tract | 7.81e-09 | 116 |
primitive gut | 7.81e-09 | 116 |
epithelial tube | 1.31e-08 | 47 |
subdivision of digestive tract | 1.35e-08 | 114 |
trunk region element | 2.08e-08 | 79 |
digestive tract diverticulum | 2.90e-08 | 23 |
sac | 2.90e-08 | 23 |
unilaminar epithelium | 4.45e-07 | 66 |
mesenchyme | 4.79e-07 | 61 |
entire embryonic mesenchyme | 4.79e-07 | 61 |
foregut | 6.52e-07 | 80 |
endo-epithelium | 9.33e-07 | 69 |