FFCP PHASE1:Mm9::chr7:89079163..89079174,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:89079163..89079174,- to FFCP PHASE1:Mm9::chr7:89079163..89079174,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=29877 | |EntrezGene=29877 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JMG7,Q3TR90 | |UniProt=Q9JMG7,Q3TR90 | ||
|association_with_transcript=170bp_to_ENSMUST00000026094,NM_013886,uc009icr.1,uc009ics.1,uc009ict.1_5end | |||
|cluster_id=chr7:89079163..89079174,- | |||
|description=CAGE_peak_5_at_Hdgfrp3_5end | |||
|id=chr7:89079163..89079174,- | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-09!23;CL:0000337!1.54e-09!23;CL:0000540!1.68e-07!33;CL:0000047!1.68e-07!33;CL:0000031!1.68e-07!33;CL:0000404!1.68e-07!33;CL:0000393!2.86e-07!39;CL:0000211!2.86e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-16,23;CL:0000337,1.36e-16,23;CL:0000540,1.97e-10,33;CL:0000047,1.97e-10,33;CL:0000031,1.97e-10,33;CL:0000404,1.97e-10,33;CL:0000393,2.81e-08,39;CL:0000211,2.81e-08,39;CL:0002610,1.24e-07,3;CL:0002319,3.47e-07,43;CL:0000221,6.05e-07,44;CL:0000133,6.05e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.24e-20!71;UBERON:0003075!5.24e-20!71;UBERON:0007284!5.24e-20!71;UBERON:0001049!6.27e-20!52;UBERON:0005068!6.27e-20!52;UBERON:0006241!6.27e-20!52;UBERON:0007135!6.27e-20!52;UBERON:0000033!6.83e-20!63;UBERON:0000955!8.16e-19!50;UBERON:0006238!8.16e-19!50;UBERON:0002616!2.49e-18!49;UBERON:0000073!2.63e-18!75;UBERON:0001016!2.63e-18!75;UBERON:0001017!3.05e-18!73;UBERON:0005743!3.05e-18!73;UBERON:0004121!5.42e-18!102;UBERON:0000924!5.42e-18!102;UBERON:0006601!5.42e-18!102;UBERON:0007811!6.37e-18!86;UBERON:0003056!1.21e-17!49;UBERON:0000153!2.93e-17!94;UBERON:0002020!1.32e-15!34;UBERON:0003080!5.24e-15!40;UBERON:0002780!2.27e-14!39;UBERON:0001890!2.27e-14!39;UBERON:0006240!2.27e-14!39;UBERON:0002791!1.13e-12!29;UBERON:0003528!1.13e-12!29;UBERON:0001893!1.13e-12!29;UBERON:0000956!3.07e-08!21;UBERON:0001869!3.07e-08!21;UBERON:0000203!3.07e-08!21;UBERON:0002619!1.73e-07!17;UBERON:0002021!2.92e-07!10;UBERON:0000411!2.92e-07!10;UBERON:0001950!2.92e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.47e-29,54;UBERON:0001049,1.04e-25,52;UBERON:0005068,1.04e-25,52;UBERON:0006241,1.04e-25,52;UBERON:0007135,1.04e-25,52;UBERON:0002020,1.08e-25,34;UBERON:0002346,2.72e-24,64;UBERON:0003075,2.72e-24,64;UBERON:0007284,2.72e-24,64;UBERON:0001017,1.09e-22,73;UBERON:0001016,7.29e-22,75;UBERON:0010371,2.58e-20,73;UBERON:0003528,3.33e-20,29;UBERON:0002791,3.33e-20,29;UBERON:0001893,3.33e-20,29;UBERON:0004121,3.47e-19,95;UBERON:0000924,3.47e-19,95;UBERON:0006601,3.47e-19,95;UBERON:0002616,4.77e-19,46;UBERON:0003056,5.52e-19,49;UBERON:0003080,7.15e-19,40;UBERON:0000955,1.64e-18,47;UBERON:0006238,1.64e-18,47;UBERON:0002780,1.89e-17,39;UBERON:0001890,1.89e-17,39;UBERON:0006240,1.89e-17,39;UBERON:0002021,4.72e-15,10;UBERON:0000411,4.72e-15,10;UBERON:0001950,4.72e-15,10;UBERON:0010314,1.73e-14,92;UBERON:0002619,3.54e-12,17;UBERON:0002420,2.57e-11,8;UBERON:0007245,2.57e-11,8;UBERON:0010009,2.57e-11,8;UBERON:0010011,2.57e-11,8;UBERON:0000454,2.57e-11,8;UBERON:0000956,4.31e-11,21;UBERON:0001869,4.31e-11,21;UBERON:0000203,4.31e-11,21;UBERON:0002240,1.08e-08,6;UBERON:0005174,1.08e-08,6;UBERON:0001137,1.08e-08,6;UBERON:0002950,2.84e-08,4;UBERON:0001891,2.84e-08,4;UBERON:0009616,2.84e-08,4;UBERON:0010286,2.84e-08,4;UBERON:0000025,8.11e-08,114;UBERON:0004684,1.24e-07,3;UBERON:0002275,1.24e-07,3;UBERON:0004111,1.24e-07,122;UBERON:0003076,2.22e-07,12;UBERON:0003057,2.22e-07,12;UBERON:0001948,7.59e-07,5;UBERON:0002315,7.59e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0.513653904676515,0.0797721589953364,0.513602189793617,0.174840804837995,0,0,0,0,0,0.42438965179803,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,1.68046899571232,0.257259436035947,0.85960031981627,0.515672092277442,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.420649922702764,1.71390590642282,1.98781686856452,1.34739879136449,0.958454710182364,0,4.40463523997555,2.68143409978894,2.4577045320999,1.45074916503213,1.73826522844578,2.08365348222704,1.67509799400829,1.68828783009504,1.68078072554491,0.883885756421003,1.56608848879013,2.60959224155421,0.454357159999104,0.302286240427142,0.869593466105033,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,0,0.722996784599558,0.884610551949874,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.9472783122627,0.915001205637253,1.63350657746724,1.04294592115366,2.04572365864264,1.66230435647648,2.27137768294861,0.81471491080253,0.248813941220186,0.758168275301024,0.210441855886474,0.520481771850815,1.14951052216736,0.900310649026746,0.90422890701429,1.08858398642125,0.384341160854549,0.843315521037559,1.03481348295606,1.07783996466421,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0,0,0.536546802799238,0.583826711835847,0.16455984991348,0.492502392237286,0.405344047729279,0.146199987425332,0,0.268412837520744,0.841159794256509,1.85228302282712,0,0,0.426576501070468,0.696710015581316,0.128867461322093,1.00841762311671,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,0.379419222745544,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,1.60550589987792,1.28932855251423,0.983609672260053,0.252470927204373,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0.849229592366497,0,0.584511715822624,0.395287777946524,0.963963949265421,0.425820255624806,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.428674070063185,0.177340233642274,0.535106452806212,0.822745103010605,0.608929898229199,0,0,1.7642271844397,0.32977250588296,0.322928853391811,0.361877549568935,0,0.492422699235184,0.582961673259701,2.59595422814714,0,0,0,0.188368457004691,0,0,0,0.559805809294632,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.743881101528023,0,0,0,5.07323644815771,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0.781226309063701,0.838874755405687,2.65742532908607,3.16833006883652,0.632022241256357,0,0.718976700153791,0.25984164595559,0.716106782669926,1.19208812868759,0.600977247599844,0.886137163047463,0.605798699688886,0.457240839929999,0.403304740547362,0.0974578807397524,0.481059208201647,0.233753804363138,0.226730383615211,0,0,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,0.920650473014354,1.71868654031819,1.03111909406213,3.42541259885321,2.2661816921691,3.37511250115903,1.80128481289688,1.35942722695261,1.55328093525546,0.62272408550506,0.798049746802062,1.02440163452481,0.243106717068294,0.419226325255965,0.551530525350042,0.666740183404846,0.618105171716683,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.320125762024346,0.34461281373368,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,0.619747364743864,0,0.999242311751784,0.467863216890817,0.644613162144895,0.57386499620653,0,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0.513653904676515,0.0797721589953364,0.513602189793617,0.174840804837995,0,0,0,0,0,0.42438965179803,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,1.68046899571232,0.257259436035947,0.85960031981627,0.515672092277442,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.420649922702764,1.71390590642282,1.98781686856452,1.34739879136449,0.958454710182364,0,4.40463523997555,2.68143409978894,2.4577045320999,1.45074916503213,1.73826522844578,2.08365348222704,1.67509799400829,1.68828783009504,1.68078072554491,0.883885756421003,1.56608848879013,2.60959224155421,0.454357159999104,0.302286240427142,0.869593466105033,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,0,0.722996784599558,0.884610551949874,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.9472783122627,0.915001205637253,1.63350657746724,1.04294592115366,2.04572365864264,1.66230435647648,2.27137768294861,0.81471491080253,0.248813941220186,0.758168275301024,0.210441855886474,0.520481771850815,1.14951052216736,0.900310649026746,0.90422890701429,1.08858398642125,0.384341160854549,0.843315521037559,1.03481348295606,1.07783996466421,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0,0,0.536546802799238,0.583826711835847,0.16455984991348,0.492502392237286,0.405344047729279,0.146199987425332,0,0.268412837520744,0.841159794256509,1.85228302282712,0,0,0.426576501070468,0.696710015581316,0.128867461322093,1.00841762311671,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,0.379419222745544,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,1.60550589987792,1.28932855251423,0.983609672260053,0.252470927204373,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0.849229592366497,0,0.584511715822624,0.395287777946524,0.963963949265421,0.425820255624806,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.428674070063185,0.177340233642274,0.535106452806212,0.822745103010605,0.608929898229199,0,0,1.7642271844397,0.32977250588296,0.322928853391811,0.361877549568935,0,0.492422699235184,0.582961673259701,2.59595422814714,0,0,0,0.188368457004691,0,0,0,0.559805809294632,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.743881101528023,0,0,0,5.07323644815771,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0.781226309063701,0.838874755405687,2.65742532908607,3.16833006883652,0.632022241256357,0,0.718976700153791,0.25984164595559,0.716106782669926,1.19208812868759,0.600977247599844,0.886137163047463,0.605798699688886,0.457240839929999,0.403304740547362,0.0974578807397524,0.481059208201647,0.233753804363138,0.226730383615211,0,0,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,0.920650473014354,1.71868654031819,1.03111909406213,3.42541259885321,2.2661816921691,3.37511250115903,1.80128481289688,1.35942722695261,1.55328093525546,0.62272408550506,0.798049746802062,1.02440163452481,0.243106717068294,0.419226325255965,0.551530525350042,0.666740183404846,0.618105171716683,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.320125762024346,0.34461281373368,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,0.619747364743864,0,0.999242311751784,0.467863216890817,0.644613162144895,0.57386499620653,0,0.463735671240843 | ||
|short_description=p5@Hdgfrp3 | |||
}} | }} |
Latest revision as of 04:24, 27 September 2015
Short description: | p5@Hdgfrp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hdgfrp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 170bp_to_ENSMUST00000026094, NM_013886, uc009icr.1, uc009ics.1, uc009ict.1_5end |
EntrezGene: | Hdgfrp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-16 | 23 |
neuron | 1.97e-10 | 33 |
neuronal stem cell | 1.97e-10 | 33 |
neuroblast | 1.97e-10 | 33 |
electrically signaling cell | 1.97e-10 | 33 |
electrically responsive cell | 2.81e-08 | 39 |
electrically active cell | 2.81e-08 | 39 |
raphe nuclei neuron | 1.24e-07 | 3 |
neural cell | 3.47e-07 | 43 |
ectodermal cell | 6.05e-07 | 44 |
neurectodermal cell | 6.05e-07 | 44 |