FFCP PHASE1:Mm9::chr9:78078472..78078482,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14857|HGNC=|MCL_coexpression_id=1756|UniProt=P13745,Q8K0V9|association_with_transcript=0bp_to_NM_008181,uc009qtz.1,uc009qua.1_5end|description=CAGE_peak_3_at_Gsta1_5end|id=chr9:78078472..78078482,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.67e-08,3;CL:0002202,3.67e-08,3;CL:0000069,3.67e-08,3;CL:0002632,3.67e-08,3;CL:0002368,3.67e-08,3;CL:0000307,3.67e-08,3;CL:0000377,3.67e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.36e-11!59;UBERON:0001007!1.02e-07!128;UBERON:0001555!1.02e-07!128;UBERON:0007026!1.02e-07!128;UBERON:0004119!2.22e-07!130;UBERON:0000925!2.22e-07!130;UBERON:0006595!2.22e-07!130;UBERON:0004921!5.31e-07!126;UBERON:0004185!5.31e-07!126;UBERON:0000160!7.85e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.86e-22,47;UBERON:0004921,8.72e-18,114;UBERON:0001007,2.33e-17,116;UBERON:0001555,2.33e-17,116;UBERON:0007026,2.33e-17,116;UBERON:0004119,6.00e-17,118;UBERON:0000925,6.00e-17,118;UBERON:0006595,6.00e-17,118;UBERON:0000160,2.48e-13,31;UBERON:0000945,1.77e-09,16;UBERON:0010039,1.77e-09,16;UBERON:0003126,3.67e-08,3;UBERON:0001005,3.67e-08,3;UBERON:0007196,3.67e-08,3;UBERON:0001558,3.67e-08,3;UBERON:0011216,1.49e-07,194|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0.288851619751275,1.32987716286794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0,0.649776417447669,1.79210754838934,0,0,0,0,0,0,0,0,3.68034769719064,4.56047757855178,3.53867111510348,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9587641827183,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,101.76898515901,0.264450566663544,0,0,0.902072229254653,2.62188582010345,2.66853652613844,1.90225626112559,11.8632265386128,3.95277491337626,1.50801125280162,0.596869416123452,0.974820435595601,18.8752075817387,36.5273304288233,38.8325482846016,0,0,0,0,0.193952487167626,0.631222379012867,0,0.147610147979602,0.470996183524124,1.1105744752962,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22915344339442,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,1.47476983244164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645857706783622,0.422190474497091,0.238744688006273,0.328281799490123,6.99554007911642,0,0,0.206386867963223,0,0,0,0,0,0,0,94.5123911834962,0,0.406638934253697,5.72428306355547,11.0816796887668,20.0893558646483,16.3185859125633,10.9929096114697,55.2305037586302,1.94422459937689,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26730383615211,0,0,0,0,0,0,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,1.44224540067226,0,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.448176066834085,0.114870937911227,0.476293691283074,0.231768651889711,0,0.824171801606613,0,0.342869252385415,0,0.476872379894642,0.581385666529314,0.376437521661322,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,1.12228454331548,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,1.07435527024149,0,0,0|short_description=p3@Gsta1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14857 | |||
|HGNC= | |||
|MCL_coexpression_id=1756 | |||
|TSSclassifier=NA | |||
|UniProt=P13745,Q8K0V9 | |||
|association_with_transcript=0bp_to_NM_008181,uc009qtz.1,uc009qua.1_5end | |||
|cluster_id=chr9:78078472..78078482,+ | |||
|description=CAGE_peak_3_at_Gsta1_5end | |||
|id=chr9:78078472..78078482,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.67e-08,3;CL:0002202,3.67e-08,3;CL:0000069,3.67e-08,3;CL:0002632,3.67e-08,3;CL:0002368,3.67e-08,3;CL:0000307,3.67e-08,3;CL:0000377,3.67e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.36e-11!59;UBERON:0001007!1.02e-07!128;UBERON:0001555!1.02e-07!128;UBERON:0007026!1.02e-07!128;UBERON:0004119!2.22e-07!130;UBERON:0000925!2.22e-07!130;UBERON:0006595!2.22e-07!130;UBERON:0004921!5.31e-07!126;UBERON:0004185!5.31e-07!126;UBERON:0000160!7.85e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.86e-22,47;UBERON:0004921,8.72e-18,114;UBERON:0001007,2.33e-17,116;UBERON:0001555,2.33e-17,116;UBERON:0007026,2.33e-17,116;UBERON:0004119,6.00e-17,118;UBERON:0000925,6.00e-17,118;UBERON:0006595,6.00e-17,118;UBERON:0000160,2.48e-13,31;UBERON:0000945,1.77e-09,16;UBERON:0010039,1.77e-09,16;UBERON:0003126,3.67e-08,3;UBERON:0001005,3.67e-08,3;UBERON:0007196,3.67e-08,3;UBERON:0001558,3.67e-08,3;UBERON:0011216,1.49e-07,194 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0.288851619751275,1.32987716286794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0,0.649776417447669,1.79210754838934,0,0,0,0,0,0,0,0,3.68034769719064,4.56047757855178,3.53867111510348,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9587641827183,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,101.76898515901,0.264450566663544,0,0,0.902072229254653,2.62188582010345,2.66853652613844,1.90225626112559,11.8632265386128,3.95277491337626,1.50801125280162,0.596869416123452,0.974820435595601,18.8752075817387,36.5273304288233,38.8325482846016,0,0,0,0,0.193952487167626,0.631222379012867,0,0.147610147979602,0.470996183524124,1.1105744752962,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22915344339442,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,1.47476983244164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645857706783622,0.422190474497091,0.238744688006273,0.328281799490123,6.99554007911642,0,0,0.206386867963223,0,0,0,0,0,0,0,94.5123911834962,0,0.406638934253697,5.72428306355547,11.0816796887668,20.0893558646483,16.3185859125633,10.9929096114697,55.2305037586302,1.94422459937689,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26730383615211,0,0,0,0,0,0,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,1.44224540067226,0,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.448176066834085,0.114870937911227,0.476293691283074,0.231768651889711,0,0.824171801606613,0,0.342869252385415,0,0.476872379894642,0.581385666529314,0.376437521661322,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,1.12228454331548,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,1.07435527024149,0,0,0 | |||
|short_description=p3@Gsta1 | |||
}} |
Latest revision as of 04:16, 27 September 2015
Short description: | p3@Gsta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gsta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1756 |
Association with transcript: | 0bp_to_NM_008181, uc009qtz.1, uc009qua.1_5end |
EntrezGene: | Gsta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.67e-08 | 3 |
epithelial cell of tracheobronchial tree | 3.67e-08 | 3 |
branched duct epithelial cell | 3.67e-08 | 3 |
epithelial cell of lower respiratory tract | 3.67e-08 | 3 |
respiratory epithelial cell | 3.67e-08 | 3 |
tracheal epithelial cell | 3.67e-08 | 3 |
tracheoblast | 3.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.86e-22 | 47 |
subdivision of digestive tract | 8.72e-18 | 114 |
digestive system | 2.33e-17 | 116 |
digestive tract | 2.33e-17 | 116 |
primitive gut | 2.33e-17 | 116 |
endoderm-derived structure | 6.00e-17 | 118 |
endoderm | 6.00e-17 | 118 |
presumptive endoderm | 6.00e-17 | 118 |
intestine | 2.48e-13 | 31 |
stomach | 1.77e-09 | 16 |
food storage organ | 1.77e-09 | 16 |
trachea | 3.67e-08 | 3 |
respiratory airway | 3.67e-08 | 3 |
tracheobronchial tree | 3.67e-08 | 3 |
lower respiratory tract | 3.67e-08 | 3 |
organ system subdivision | 1.49e-07 | 194 |