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FFCP PHASE1:Mm9::chr18:23200142..23200172,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:23200142..23200172,-
|DHSsupport=NA
|short_description=p1@Nol4
|DPIdataset=NA
|description=CAGE_peak_1_at_Nol4_5end
|association_with_transcript=0bp_to_ENSMUST00000097651,ENSMUST00000171159,NM_199024,uc008efr.2_5end
|EntrezGene=319211
|EntrezGene=319211
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=P60954,Q8C0U4
|UniProt=P60954,Q8C0U4
|association_with_transcript=0bp_to_ENSMUST00000097651,ENSMUST00000171159,NM_199024,uc008efr.2_5end
|cluster_id=chr18:23200142..23200172,-
|description=CAGE_peak_1_at_Nol4_5end
|id=chr18:23200142..23200172,-
|ontology_enrichment_celltype=CL:0000540!3.76e-14!33;CL:0000047!3.76e-14!33;CL:0000031!3.76e-14!33;CL:0000404!3.76e-14!33;CL:0000393!1.80e-12!39;CL:0000211!1.80e-12!39;CL:0000117!7.25e-12!23;CL:0000337!7.25e-12!23;CL:0000221!1.56e-11!44;CL:0000133!1.56e-11!44;CL:0002319!2.00e-11!43;CL:0000055!7.86e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.96e-17,33;CL:0000047,2.96e-17,33;CL:0000031,2.96e-17,33;CL:0000404,2.96e-17,33;CL:0000117,3.49e-15,23;CL:0000337,3.49e-15,23;CL:0000393,8.05e-13,39;CL:0000211,8.05e-13,39;CL:0000221,3.82e-12,44;CL:0000133,3.82e-12,44;CL:0002319,5.44e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.43e-32!71;UBERON:0003075!6.43e-32!71;UBERON:0007284!6.43e-32!71;UBERON:0001017!1.53e-31!73;UBERON:0005743!1.53e-31!73;UBERON:0000073!1.58e-30!75;UBERON:0001016!1.58e-30!75;UBERON:0004121!1.21e-29!102;UBERON:0000924!1.21e-29!102;UBERON:0006601!1.21e-29!102;UBERON:0000033!6.48e-28!63;UBERON:0003056!8.77e-28!49;UBERON:0001049!8.50e-26!52;UBERON:0005068!8.50e-26!52;UBERON:0006241!8.50e-26!52;UBERON:0007135!8.50e-26!52;UBERON:0000955!1.74e-25!50;UBERON:0006238!1.74e-25!50;UBERON:0002616!8.67e-25!49;UBERON:0003080!6.48e-23!40;UBERON:0002780!2.06e-22!39;UBERON:0001890!2.06e-22!39;UBERON:0006240!2.06e-22!39;UBERON:0002020!4.46e-19!34;UBERON:0007811!2.22e-18!86;UBERON:0002791!3.12e-17!29;UBERON:0003528!3.12e-17!29;UBERON:0001893!3.12e-17!29;UBERON:0000153!1.20e-16!94;UBERON:0000956!2.91e-13!21;UBERON:0001869!2.91e-13!21;UBERON:0000203!2.91e-13!21;UBERON:0002619!9.67e-11!17;UBERON:0002021!1.99e-08!10;UBERON:0000411!1.99e-08!10;UBERON:0001950!1.99e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.84e-41,64;UBERON:0003075,4.84e-41,64;UBERON:0007284,4.84e-41,64;UBERON:0001017,5.67e-38,73;UBERON:0001016,2.92e-36,75;UBERON:0004121,5.70e-36,95;UBERON:0000924,5.70e-36,95;UBERON:0006601,5.70e-36,95;UBERON:0003056,1.76e-35,49;UBERON:0010371,7.43e-34,73;UBERON:0000073,8.58e-34,54;UBERON:0001049,2.53e-32,52;UBERON:0005068,2.53e-32,52;UBERON:0006241,2.53e-32,52;UBERON:0007135,2.53e-32,52;UBERON:0000955,6.49e-30,47;UBERON:0006238,6.49e-30,47;UBERON:0003080,4.90e-29,40;UBERON:0002616,5.18e-29,46;UBERON:0002780,2.26e-28,39;UBERON:0001890,2.26e-28,39;UBERON:0006240,2.26e-28,39;UBERON:0002020,5.69e-24,34;UBERON:0010314,1.50e-22,92;UBERON:0003528,1.63e-21,29;UBERON:0002791,1.63e-21,29;UBERON:0001893,1.63e-21,29;UBERON:0000956,2.95e-16,21;UBERON:0001869,2.95e-16,21;UBERON:0000203,2.95e-16,21;UBERON:0002619,6.10e-13,17;UBERON:0002021,1.22e-10,10;UBERON:0000411,1.22e-10,10;UBERON:0001950,1.22e-10,10;UBERON:0001894,1.28e-07,10;UBERON:0006222,1.28e-07,10;UBERON:0000970,6.40e-07,9;UBERON:0000019,6.40e-07,9;UBERON:0000047,6.40e-07,9;UBERON:0010312,6.40e-07,9;UBERON:0004088,6.40e-07,9;UBERON:0002104,6.40e-07,9;UBERON:0001456,6.40e-07,9;UBERON:0003072,6.40e-07,9;UBERON:0004128,6.40e-07,9;UBERON:0003071,6.40e-07,9
|phase1_expression=0.160148847104794,0,0,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,8.07911256435163,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0.872100625521786,0.439372365468944,1.1665793944457,0.279972843250725,0,0,0,0,0.514518872071894,0,0.515672092277442,5.66486090406874,8.46385566835253,10.1413024560989,0,0,0,0,0,0.599200221036809,1.15265491596466,14.5165457231869,11.4755047581937,15.5640471400023,2.85650984403804,1.98781686856452,15.0663683034393,14.0892842396807,6.43453150627015,5.50579404996943,7.91661496128164,5.52983519722476,9.49581271657396,7.77644970620482,10.939180781692,2.51264699101243,2.8138130501584,7.94550888439413,5.89257170947335,4.6982654663704,7.08317894136142,0.075726193333184,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0.340860645156116,0,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0,0,1.1418387971906,0,1.03909497345377,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.823120949949934,0.502666365318702,0,0,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0.239630249011841,0,0,6.74057877321702,17.8425235099264,12.1884721549478,25.8998237086492,24.8043993610421,7.06479351502504,12.1680947300818,0.203678727700633,0.124406970610093,0,1.68353484709179,4.81445638962004,6.20735681970377,8.10279584124071,10.3986324306643,21.0232782377603,19.7295129238669,16.6789069716317,3.10444044886819,0,0.756424320671277,1.58356011747554,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,11.565947171027,12.7601719350313,0.330418782983798,0,0.213288250535234,0.696710015581316,0.644337306610467,0.605050573870028,0,0,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.339490171550376,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,0,0,2.24770825982909,3.16471553798949,0.163934945376675,0.252470927204373,4.73262329124385,3.51394869866975,6.46270193198397,0.477937595905104,2.67358408898873,1.69845918473299,5.26253912177363,7.59865230569411,5.92931666919785,14.7807805554031,0,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,1.45668381692989,1.51161778482376,1.32023555829129,0.885905678642318,1.53717573971964,2.32585463851399,1.81766864738753,1.42598951353889,0.632073515871632,0,1.03135543248187,10.8940673841212,5.221771726908,2.71653235943784,7.93047029616891,12.7684968222437,9.63191615051181,9.3792941743209,5.48036908406279,0.469343416127421,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.70850604021019,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.432021363287205,0.209088296014469,0.87345025498471,0,0.330613822901344,0.26175594198403,0,0,67.6431526421028,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.938857909166032,0.5208175393758,0.419437377702843,0.483168241652012,33.4114807259124,0.632022241256357,1.21635129174099,0.718976700153791,0.909445760844565,0.895133478337407,0.39736270956253,0.360586348559907,0,0.302899349844443,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.350630706544707,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,20.3310663342144,26.2385384809091,24.6345070778941,18.7319968754619,23.2928056722018,26.4387864086395,40.5013500139084,32.8734478353681,30.8136838109259,40.9030646283938,1.45302286617847,1.99512436700516,4.09760653809922,1.94485373654635,2.30574478890781,0.551530525350042,1.33348036680969,0.824140228955577,2.56735367673452,2.27427490587418,4.05566879824384,1.88626341386076,1.96647165686753,1.85672941974121,1.32101578597911,0.952587382566147,2.0859178670074,2.31491064556446,1.23625770240992,1.61918812147837,1.02860775715625,2.12970967391205,1.90748951957857,1.59881058295561,2.35273451038327,2.03075058940024,1.28049581010941,2.63069711437843,2.17286582153379,2.80571135828869,2.25406534435931,2.26560309463796,2.86461730218783,1.54936841185966,1.15743966588685,2.49810577937946,1.63752125911786,1.50409737833809,0.765153328275374,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,8.07911256435163,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0.872100625521786,0.439372365468944,1.1665793944457,0.279972843250725,0,0,0,0,0.514518872071894,0,0.515672092277442,5.66486090406874,8.46385566835253,10.1413024560989,0,0,0,0,0,0.599200221036809,1.15265491596466,14.5165457231869,11.4755047581937,15.5640471400023,2.85650984403804,1.98781686856452,15.0663683034393,14.0892842396807,6.43453150627015,5.50579404996943,7.91661496128164,5.52983519722476,9.49581271657396,7.77644970620482,10.939180781692,2.51264699101243,2.8138130501584,7.94550888439413,5.89257170947335,4.6982654663704,7.08317894136142,0.075726193333184,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0.340860645156116,0,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0,0,1.1418387971906,0,1.03909497345377,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.823120949949934,0.502666365318702,0,0,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0.239630249011841,0,0,6.74057877321702,17.8425235099264,12.1884721549478,25.8998237086492,24.8043993610421,7.06479351502504,12.1680947300818,0.203678727700633,0.124406970610093,0,1.68353484709179,4.81445638962004,6.20735681970377,8.10279584124071,10.3986324306643,21.0232782377603,19.7295129238669,16.6789069716317,3.10444044886819,0,0.756424320671277,1.58356011747554,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,11.565947171027,12.7601719350313,0.330418782983798,0,0.213288250535234,0.696710015581316,0.644337306610467,0.605050573870028,0,0,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.339490171550376,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,0,0,2.24770825982909,3.16471553798949,0.163934945376675,0.252470927204373,4.73262329124385,3.51394869866975,6.46270193198397,0.477937595905104,2.67358408898873,1.69845918473299,5.26253912177363,7.59865230569411,5.92931666919785,14.7807805554031,0,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,1.45668381692989,1.51161778482376,1.32023555829129,0.885905678642318,1.53717573971964,2.32585463851399,1.81766864738753,1.42598951353889,0.632073515871632,0,1.03135543248187,10.8940673841212,5.221771726908,2.71653235943784,7.93047029616891,12.7684968222437,9.63191615051181,9.3792941743209,5.48036908406279,0.469343416127421,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.70850604021019,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.432021363287205,0.209088296014469,0.87345025498471,0,0.330613822901344,0.26175594198403,0,0,67.6431526421028,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.938857909166032,0.5208175393758,0.419437377702843,0.483168241652012,33.4114807259124,0.632022241256357,1.21635129174099,0.718976700153791,0.909445760844565,0.895133478337407,0.39736270956253,0.360586348559907,0,0.302899349844443,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.350630706544707,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,20.3310663342144,26.2385384809091,24.6345070778941,18.7319968754619,23.2928056722018,26.4387864086395,40.5013500139084,32.8734478353681,30.8136838109259,40.9030646283938,1.45302286617847,1.99512436700516,4.09760653809922,1.94485373654635,2.30574478890781,0.551530525350042,1.33348036680969,0.824140228955577,2.56735367673452,2.27427490587418,4.05566879824384,1.88626341386076,1.96647165686753,1.85672941974121,1.32101578597911,0.952587382566147,2.0859178670074,2.31491064556446,1.23625770240992,1.61918812147837,1.02860775715625,2.12970967391205,1.90748951957857,1.59881058295561,2.35273451038327,2.03075058940024,1.28049581010941,2.63069711437843,2.17286582153379,2.80571135828869,2.25406534435931,2.26560309463796,2.86461730218783,1.54936841185966,1.15743966588685,2.49810577937946,1.63752125911786,1.50409737833809,0.765153328275374,0.220591419119515,0
|short_description=p1@Nol4
}}
}}

Latest revision as of 02:38, 27 September 2015

Short description:p1@Nol4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nol4_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000097651, ENSMUST00000171159, NM_199024, uc008efr.2_5end
EntrezGene:Nol4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nol4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.07
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F112.19
cortex, adult.CNhs10473.12-14D525.90
cortex, neonate N30.CNhs11107.1392-42F224.80
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D410.40
eyeball, neonate N00.CNhs11207.633-15C621.02
eyeball, neonate N01.CNhs11140.1532-43E719.73
eyeball, neonate N02.CNhs11205.1551-44G816.68
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G112.76
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A57.93
pituitary gland, embryo E15.CNhs10592.427-16B912.77
pituitary gland, embryo E16.CNhs11036.449-43F69.63
pituitary gland, embryo E17.CNhs11039.1265-44F59.38
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G567.64
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E233.41
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A640.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.90
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.96e-1733
neuronal stem cell2.96e-1733
neuroblast2.96e-1733
electrically signaling cell2.96e-1733
CNS neuron (sensu Vertebrata)3.49e-1523
neuroblast (sensu Vertebrata)3.49e-1523
electrically responsive cell8.05e-1339
electrically active cell8.05e-1339
ectodermal cell3.82e-1244
neurectodermal cell3.82e-1244
neural cell5.44e-1243

Uber anatomy
Ontology termp-valuen
neurectoderm4.84e-4164
neural plate4.84e-4164
presumptive neural plate4.84e-4164
central nervous system5.67e-3873
nervous system2.92e-3675
ectoderm-derived structure5.70e-3695
ectoderm5.70e-3695
presumptive ectoderm5.70e-3695
pre-chordal neural plate1.76e-3549
ecto-epithelium7.43e-3473
regional part of nervous system8.58e-3454
neural tube2.53e-3252
neural rod2.53e-3252
future spinal cord2.53e-3252
neural keel2.53e-3252
brain6.49e-3047
future brain6.49e-3047
anterior neural tube4.90e-2940
regional part of brain5.18e-2946
regional part of forebrain2.26e-2839
forebrain2.26e-2839
future forebrain2.26e-2839
gray matter5.69e-2434
structure with developmental contribution from neural crest1.50e-2292
brain grey matter1.63e-2129
regional part of telencephalon1.63e-2129
telencephalon1.63e-2129
cerebral cortex2.95e-1621
cerebral hemisphere2.95e-1621
pallium2.95e-1621
regional part of cerebral cortex6.10e-1317
occipital lobe1.22e-1010
visual cortex1.22e-1010
neocortex1.22e-1010
diencephalon1.28e-0710
future diencephalon1.28e-0710
eye6.40e-079
camera-type eye6.40e-079
simple eye6.40e-079
immature eye6.40e-079
ocular region6.40e-079
visual system6.40e-079
face6.40e-079
optic cup6.40e-079
optic vesicle6.40e-079
eye primordium6.40e-079
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