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FFCP PHASE1:Mm9::chr15:76984335..76984393,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=93686
|EntrezGene=93686
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8BP71
|UniProt=Q8BP71
|association_with_transcript=-93bp_to_ENSMUST00000111581,ENSMUST00000166610,NM_001110828,NM_001110829,NM_001110830,uc007wnc.2,uc007wnd.2,uc007wne.2,uc007wnf.2,uc011zvf.1,uc011zvg.1_5end
|association_with_transcript=-93bp_to_ENSMUST00000111581,ENSMUST00000166610,NM_001110828,NM_001110829,NM_001110830,uc007wnc.2,uc007wnd.2,uc007wne.2,uc007wnf.2,uc011zvf.1,uc011zvg.1_5end
|cluster_id=chr15:76984335..76984393,-
|description=CAGE_peak_10_at_Rbfox2_5end
|description=CAGE_peak_10_at_Rbfox2_5end
|id=chr15:76984335..76984393,-
|id=chr15:76984335..76984393,-
|ontology_enrichment_celltype=CL:0000117!4.82e-16!23;CL:0000337!4.82e-16!23;CL:0000540!1.04e-09!33;CL:0000047!1.04e-09!33;CL:0000031!1.04e-09!33;CL:0000404!1.04e-09!33;CL:0000393!4.26e-07!39;CL:0000211!4.26e-07!39;CL:0000221!4.31e-07!44;CL:0000133!4.31e-07!44;CL:0002319!5.04e-07!43
|ontology_enrichment_celltype=CL:0000117!4.82e-16!23;CL:0000337!4.82e-16!23;CL:0000540!1.04e-09!33;CL:0000047!1.04e-09!33;CL:0000031!1.04e-09!33;CL:0000404!1.04e-09!33;CL:0000393!4.26e-07!39;CL:0000211!4.26e-07!39;CL:0000221!4.31e-07!44;CL:0000133!4.31e-07!44;CL:0002319!5.04e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-24,23;CL:0000337,1.51e-24,23;CL:0000540,8.57e-16,33;CL:0000047,8.57e-16,33;CL:0000031,8.57e-16,33;CL:0000404,8.57e-16,33;CL:0000393,3.95e-12,39;CL:0000211,3.95e-12,39;CL:0002319,2.75e-10,43;CL:0000221,6.99e-10,44;CL:0000133,6.99e-10,44;CL:0002609,2.04e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.06e-23!63;UBERON:0001049!4.11e-22!52;UBERON:0005068!4.11e-22!52;UBERON:0006241!4.11e-22!52;UBERON:0007135!4.11e-22!52;UBERON:0000955!1.12e-21!50;UBERON:0006238!1.12e-21!50;UBERON:0002616!1.77e-21!49;UBERON:0003056!6.85e-21!49;UBERON:0002346!1.52e-20!71;UBERON:0003075!1.52e-20!71;UBERON:0007284!1.52e-20!71;UBERON:0001017!2.23e-20!73;UBERON:0005743!2.23e-20!73;UBERON:0000073!3.10e-20!75;UBERON:0001016!3.10e-20!75;UBERON:0004121!1.69e-19!102;UBERON:0000924!1.69e-19!102;UBERON:0006601!1.69e-19!102;UBERON:0003080!2.00e-18!40;UBERON:0002020!7.38e-18!34;UBERON:0002780!1.05e-17!39;UBERON:0001890!1.05e-17!39;UBERON:0006240!1.05e-17!39;UBERON:0002791!2.48e-15!29;UBERON:0003528!2.48e-15!29;UBERON:0001893!2.48e-15!29;UBERON:0000153!3.75e-14!94;UBERON:0007811!3.58e-12!86;UBERON:0000956!6.19e-10!21;UBERON:0001869!6.19e-10!21;UBERON:0000203!6.19e-10!21;UBERON:0000025!2.16e-09!114;UBERON:0004111!4.81e-08!122;UBERON:0002619!1.60e-07!17;UBERON:0002420!7.47e-07!8;UBERON:0007245!7.47e-07!8;UBERON:0010009!7.47e-07!8;UBERON:0010011!7.47e-07!8;UBERON:0000454!7.47e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-30,54;UBERON:0002020,5.05e-27,34;UBERON:0001049,2.51e-26,52;UBERON:0005068,2.51e-26,52;UBERON:0006241,2.51e-26,52;UBERON:0007135,2.51e-26,52;UBERON:0002346,1.08e-24,64;UBERON:0003075,1.08e-24,64;UBERON:0007284,1.08e-24,64;UBERON:0001017,1.90e-24,73;UBERON:0001016,2.21e-23,75;UBERON:0003080,4.35e-23,40;UBERON:0002616,4.51e-23,46;UBERON:0003056,5.24e-23,49;UBERON:0003528,5.25e-23,29;UBERON:0002791,5.25e-23,29;UBERON:0001893,5.25e-23,29;UBERON:0000955,2.51e-22,47;UBERON:0006238,2.51e-22,47;UBERON:0002780,5.26e-22,39;UBERON:0001890,5.26e-22,39;UBERON:0006240,5.26e-22,39;UBERON:0010371,7.62e-21,73;UBERON:0004121,9.88e-20,95;UBERON:0000924,9.88e-20,95;UBERON:0006601,9.88e-20,95;UBERON:0010314,1.76e-14,92;UBERON:0000956,1.80e-14,21;UBERON:0001869,1.80e-14,21;UBERON:0000203,1.80e-14,21;UBERON:0002619,1.12e-10,17;UBERON:0002420,5.76e-10,8;UBERON:0007245,5.76e-10,8;UBERON:0010009,5.76e-10,8;UBERON:0010011,5.76e-10,8;UBERON:0000454,5.76e-10,8;UBERON:0002021,7.24e-08,10;UBERON:0000411,7.24e-08,10;UBERON:0001950,7.24e-08,10;UBERON:0000369,1.74e-07,5;UBERON:0002435,1.74e-07,5;UBERON:0000204,1.74e-07,5;UBERON:0010082,1.74e-07,5
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0.515672092277442,9.1042407386819,15.340738398889,10.1413024560989,0.338844532069132,0,0,0,0,0.299600110518405,0,2.38486108309499,5.13022565660425,2.94454945891935,1.14260393761521,1.10434270475807,3.55223317723367,2.58782771749238,2.75765635983006,3.30347642998166,4.59674417106676,5.06901559745603,12.0016521834476,15.7358746996145,17.1901412283731,1.3959149950069,2.8138130501584,3.51435969886663,2.65165726926301,2.56269025438385,4.10078780815661,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,0.281686839553361,0,0,7.11066703153331,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,1.67557365450764,0,0,0,0,3.59497534571574,3.20250421973039,6.65968066198181,2.60736480288415,3.3243009452943,3.74018480207208,2.27137768294861,0.305518091550949,0.497627882440372,0.252722758433675,0.210441855886474,0.650602214813519,0.919608417733892,1.44049703844279,1.20563854268572,1.42876648217788,1.5373646434182,1.03071897015702,0.517406741478031,0.646703978798527,1.70195472151037,2.28736461413134,1.97276159184817,1.94633074457919,0.696504333044333,0.411564272815887,0,0,0,0,0.828503090142008,0,0.900310307305074,0.710234206755631,1.57411385397923,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.656669856316381,0.324275238183423,0.584799949701329,0.878200461164203,0.134206418760372,2.3131894342054,7.40913209130848,0,0,0,0.464473343720877,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,0,0,0,0,0,0,0,0.491764273019036,0.551873492609465,0.963303539926752,2.34423373184406,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,1.44048875225048,0.646793418913773,0.214337035031592,0.177340233642274,0.356737635204141,1.31639216481697,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,2.29158205375759,1.03111909406213,2.05524755931193,0.755393897389701,4.05013500139084,2.70192721934532,2.26571204492102,2.5888015587591,0.830298780673413,2.39414924040619,1.70733605754134,0.729320151204882,1.67690530102386,3.12533964365024,2.00022055021454,1.03017528619447,0,1.76888048234658,1.2673964994512,1.13175804831646,1.40462261204824,2.11283002936069,1.26358031702349,2.38146845641537,0.927074607558844,0.964546102318525,1.23625770240992,2.79677948255355,1.71434626192708,1.24233064311536,1.43061713968393,1.16277133305863,1.50575008664529,1.35383372626682,0.548783918618318,2.10455769150274,1.22223702461276,1.12228454331548,0.474540072496697,1.37906275325789,1.22769312950907,1.54936841185966,2.3148793317737,3.49734809113124,1.16965804222704,0.429742108096597,0.191288332068843,0,0
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0.515672092277442,9.1042407386819,15.340738398889,10.1413024560989,0.338844532069132,0,0,0,0,0.299600110518405,0,2.38486108309499,5.13022565660425,2.94454945891935,1.14260393761521,1.10434270475807,3.55223317723367,2.58782771749238,2.75765635983006,3.30347642998166,4.59674417106676,5.06901559745603,12.0016521834476,15.7358746996145,17.1901412283731,1.3959149950069,2.8138130501584,3.51435969886663,2.65165726926301,2.56269025438385,4.10078780815661,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,0.281686839553361,0,0,7.11066703153331,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,1.67557365450764,0,0,0,0,3.59497534571574,3.20250421973039,6.65968066198181,2.60736480288415,3.3243009452943,3.74018480207208,2.27137768294861,0.305518091550949,0.497627882440372,0.252722758433675,0.210441855886474,0.650602214813519,0.919608417733892,1.44049703844279,1.20563854268572,1.42876648217788,1.5373646434182,1.03071897015702,0.517406741478031,0.646703978798527,1.70195472151037,2.28736461413134,1.97276159184817,1.94633074457919,0.696504333044333,0.411564272815887,0,0,0,0,0.828503090142008,0,0.900310307305074,0.710234206755631,1.57411385397923,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.656669856316381,0.324275238183423,0.584799949701329,0.878200461164203,0.134206418760372,2.3131894342054,7.40913209130848,0,0,0,0.464473343720877,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,0,0,0,0,0,0,0,0.491764273019036,0.551873492609465,0.963303539926752,2.34423373184406,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,1.44048875225048,0.646793418913773,0.214337035031592,0.177340233642274,0.356737635204141,1.31639216481697,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,2.29158205375759,1.03111909406213,2.05524755931193,0.755393897389701,4.05013500139084,2.70192721934532,2.26571204492102,2.5888015587591,0.830298780673413,2.39414924040619,1.70733605754134,0.729320151204882,1.67690530102386,3.12533964365024,2.00022055021454,1.03017528619447,0,1.76888048234658,1.2673964994512,1.13175804831646,1.40462261204824,2.11283002936069,1.26358031702349,2.38146845641537,0.927074607558844,0.964546102318525,1.23625770240992,2.79677948255355,1.71434626192708,1.24233064311536,1.43061713968393,1.16277133305863,1.50575008664529,1.35383372626682,0.548783918618318,2.10455769150274,1.22223702461276,1.12228454331548,0.474540072496697,1.37906275325789,1.22769312950907,1.54936841185966,2.3148793317737,3.49734809113124,1.16965804222704,0.429742108096597,0.191288332068843,0,0
|short_description=p10@Rbfox2
|short_description=p10@Rbfox2
}}
}}

Latest revision as of 01:21, 27 September 2015

Short description:p10@Rbfox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Rbfox2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -93bp_to_ENSMUST00000111581, ENSMUST00000166610, NM_001110828, NM_001110829, NM_001110830, uc007wnc.2, uc007wnd.2, uc007wne.2, uc007wnf.2, uc011zvf.1, uc011zvg.1_5end
EntrezGene:Rbfox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Rbfox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F16.66
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.61e-3054
gray matter5.05e-2734
neural tube2.51e-2652
neural rod2.51e-2652
future spinal cord2.51e-2652
neural keel2.51e-2652
neurectoderm1.08e-2464
neural plate1.08e-2464
presumptive neural plate1.08e-2464
central nervous system1.90e-2473
nervous system2.21e-2375
anterior neural tube4.35e-2340
regional part of brain4.51e-2346
pre-chordal neural plate5.24e-2349
brain grey matter5.25e-2329
regional part of telencephalon5.25e-2329
telencephalon5.25e-2329
brain2.51e-2247
future brain2.51e-2247
regional part of forebrain5.26e-2239
forebrain5.26e-2239
future forebrain5.26e-2239
ecto-epithelium7.62e-2173
ectoderm-derived structure9.88e-2095
ectoderm9.88e-2095
presumptive ectoderm9.88e-2095
structure with developmental contribution from neural crest1.76e-1492
cerebral cortex1.80e-1421
cerebral hemisphere1.80e-1421
pallium1.80e-1421
regional part of cerebral cortex1.12e-1017
basal ganglion5.76e-108
nuclear complex of neuraxis5.76e-108
aggregate regional part of brain5.76e-108
collection of basal ganglia5.76e-108
cerebral subcortex5.76e-108
occipital lobe7.24e-0810
visual cortex7.24e-0810
neocortex7.24e-0810
corpus striatum1.74e-075
striatum1.74e-075
ventral part of telencephalon1.74e-075
future corpus striatum1.74e-075
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