FFCP PHASE1:Mm9::chr9:66440779..66440792,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235441 | |EntrezGene=235441 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3721 | |||
|TSSclassifier=NA | |||
|UniProt=Q91W36,Q3TT00 | |UniProt=Q91W36,Q3TT00 | ||
|association_with_transcript=0bp_to_NM_144937,uc009qey.1,uc009qez.1,uc012gvp.1_5end | |association_with_transcript=0bp_to_NM_144937,uc009qey.1,uc009qez.1,uc012gvp.1_5end | ||
|cluster_id=chr9:66440779..66440792,- | |||
|description=CAGE_peak_3_at_Usp3_5end | |description=CAGE_peak_3_at_Usp3_5end | ||
|id=chr9:66440779..66440792,- | |id=chr9:66440779..66440792,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!4.22e-08!24;UBERON:0002370!1.42e-07!23;UBERON:0000974!1.42e-07!23;UBERON:0004807!1.42e-07!23;UBERON:0005058!1.42e-07!23;UBERON:0003351!1.42e-07!23;UBERON:0009113!1.42e-07!23;UBERON:0003295!1.42e-07!23;UBERON:0009722!1.42e-07!23;UBERON:0005562!1.42e-07!23;UBERON:0007690!1.42e-07!23;UBERON:0006562!1.73e-07!24;UBERON:0001557!1.73e-07!24;UBERON:0001042!1.73e-07!24;UBERON:0008814!1.73e-07!24;UBERON:0009145!1.73e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,4.21e-08,24;UBERON:0000153,1.15e-07,43;UBERON:0002370,1.41e-07,23;UBERON:0000974,1.41e-07,23;UBERON:0004807,1.41e-07,23;UBERON:0005058,1.41e-07,23;UBERON:0003351,1.41e-07,23;UBERON:0009113,1.41e-07,23;UBERON:0003295,1.41e-07,23;UBERON:0009722,1.41e-07,23;UBERON:0005562,1.41e-07,23;UBERON:0007690,1.41e-07,23;UBERON:0006562,1.72e-07,24;UBERON:0001557,1.72e-07,24;UBERON:0001042,1.72e-07,24;UBERON:0008814,1.72e-07,24;UBERON:0009145,1.72e-07,24;UBERON:0007811,5.57e-07,36 | |||
|phase1_expression=1.44133962394315,4.53668029931169,4.09499315450582,9.98131897312539,8.01433167914156,5.70789524500425,4.20502753071946,11.1046058159756,3.94208422024667,4.91535505276186,4.10923123741212,2.95156988282745,15.7504671536709,10.5778686926987,2.99798785634096,2.22722794128809,2.09868563438444,7.72882305127682,7.26706498110415,3.81950686618227,3.06155844543851,5.65958421845046,4.4403964153619,4.95976510659561,4.12936705920906,2.29692785646008,5.1691439539089,7.75696437669201,3.42042155021473,7.56090389279792,4.43461021310609,3.17515336729816,9.22597181376855,0,6.06588401477677,5.31950865147176,4.28755648150975,7.53356935326434,7.813353445238,7.85285615960697,7.64700934440319,5.46436387966757,6.311634589405,0.503587271902309,2.12891555560981,1.65192076945513,0,1.09012578190223,0.659058548203415,2.3331587888914,1.81982348112971,1.43752564364972,4.69791296961662,10.1550699881588,11.7632829699862,2.05807548828758,2.0057340795713,1.54701627683233,7.28339259094552,3.1739458756322,8.87363964908651,2.71075625655306,0,1.7997994345628,0,0.7104801149461,0.299600110518405,0.768436610643109,8.70992743391212,8.23536223823313,9.25429829946081,1.42825492201902,3.3130281142742,6.85948475603743,7.85932862349538,11.0306254393203,1.10115880999389,1.27687338085188,1.0752457327937,5.53922408466814,5.48925861614458,4.16730696445408,0.837548997004143,1.68828783009504,0.916789486660861,1.47314292736834,3.27454865837937,4.47358669980721,2.34751199332871,2.11600368298999,8.40607017234866,3.44169550792555,4.75979933595425,1.61910957491345,3.24888208723835,2.24013443548668,0.983110940922263,1.70430322578058,1.29893002301434,1.41335829804136,2.81686839553361,2.56652954828636,12.7402619853323,7.11066703153331,3.68034769719064,2.28023878927589,2.52762222507392,3.53970027129086,8.2860122767095,3.41416919849097,1.90833859442749,1.52232739156071,1.84492397804847,2.11011696773672,1.76383060703557,2.76466500925286,2.22475470960936,3.18118585223806,0.884610551949874,3.23533699894818,4.41683036920787,3.39412677194655,0,7.31951992528868,7.12118803165747,4.85368404896324,4.79260498023681,5.39912457894067,2.54140454146129,1.04853447583376,2.74500361691176,3.26701315493447,0.521472960576829,0.511430914660661,1.66230435647648,1.94689515681309,3.36069900706044,4.97627882440372,3.53811861807145,5.05060454127538,4.42409506073193,5.74755261083682,4.86167750474443,3.91832526372859,5.17077393550092,4.22775276940004,4.8724896771059,3.3631438196072,7.97601573851516,7.37513712654495,4.57472922826267,5.04150184583422,2.78047249225598,5.57203466435466,3.70407845534298,3.78165106955137,5.61770549850588,5.66165395652373,5.11494298912067,4.97101854085205,5.39409937956521,3.42117916775928,4.26140524053378,3.93528463494808,2.93107514486019,4.88321283975857,4.02410102099429,6.07179780309281,3.94943639792353,3.2833492815819,3.64809642956351,2.77779976108131,3.51280184465681,2.41571553768669,1.05144974282064,2.57261530948211,8.92130714056255,3.43785736662608,4.90562976231038,4.64473343720877,5.92790322081629,5.84882221407693,5.78182913996663,5.1360919050391,6.64340686162316,3.29397909448022,2.76468729680296,4.77495532898762,6.23885078781184,5.39291645192533,5.18731319699266,5.57595565112228,6.82804443431094,3.77020091612105,7.88954149711563,3.46207257337034,3.10323979468201,4.9095073923223,4.23684798732524,4.87113488332687,3.61097074035162,3.08492909804501,2.37162101669719,3.33690211432188,2.55526693647164,2.69834534861824,2.43432145666204,0.964708639009667,3.31013607315846,4.02774592431135,2.59416362840057,2.19649130550465,0,1.48856379067401,2.18426371180192,2.52578877947112,3.76734568396016,5.30687873499704,3.51031061316549,4.54779388249163,4.4000543639347,3.22515662972857,4.22442446919304,4.35516269348721,6.66522194480839,4.87834119644497,5.67486518782288,4.4292937929755,5.26200736569707,2.29408640602033,3.10832967358612,4.05017364028232,3.01582567878545,2.17562273527484,3.44234991113325,4.96686143348518,0.642202359951168,1.05490517932983,0.983609672260053,4.54447668967871,6.31016438832513,5.85658116444958,7.97066571611356,5.4962823529087,5.79276552614225,11.0399847007645,10.5250782435473,4.9683495844923,8.69633111482352,6.42642632843614,8.23252494207958,3.02711526234334,3.58351310577867,3.95928295134085,6.63725691699814,3.39892890616974,2.41858845571801,3.20628635585027,2.06711325016541,3.68922177532713,5.94385074286909,6.90714086007261,2.49548164869305,4.42451461110142,5.27093042874994,3.09406629744561,2.7235168460303,3.96134406868882,2.97524972700335,4.92975180572662,3.3694644392032,3.38900753443934,3.29098041204242,3.65357938937519,2.3467170806371,2.1183207086382,3.96951116498931,5.7710188529518,3.71368181400583,4.58378229453985,4.65552141612232,5.41664969158702,4.37221254944776,1.66882771809459,3.07567585436135,4.12773735926445,2.40752885580625,1.88368457004691,2.59719032669948,4.57556346413045,6.28920190977265,5.87796099759364,5.11339903076368,3.81868247206045,7.27572785236611,6.30290348093231,3.56417624711944,5.43629569637619,3.27543845619266,3.3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| |phase1_expression=1.44133962394315,4.53668029931169,4.09499315450582,9.98131897312539,8.01433167914156,5.70789524500425,4.20502753071946,11.1046058159756,3.94208422024667,4.91535505276186,4.10923123741212,2.95156988282745,15.7504671536709,10.5778686926987,2.99798785634096,2.22722794128809,2.09868563438444,7.72882305127682,7.26706498110415,3.81950686618227,3.06155844543851,5.65958421845046,4.4403964153619,4.95976510659561,4.12936705920906,2.29692785646008,5.1691439539089,7.75696437669201,3.42042155021473,7.56090389279792,4.43461021310609,3.17515336729816,9.22597181376855,0,6.06588401477677,5.31950865147176,4.28755648150975,7.53356935326434,7.813353445238,7.85285615960697,7.64700934440319,5.46436387966757,6.311634589405,0.503587271902309,2.12891555560981,1.65192076945513,0,1.09012578190223,0.659058548203415,2.3331587888914,1.81982348112971,1.43752564364972,4.69791296961662,10.1550699881588,11.7632829699862,2.05807548828758,2.0057340795713,1.54701627683233,7.28339259094552,3.1739458756322,8.87363964908651,2.71075625655306,0,1.7997994345628,0,0.7104801149461,0.299600110518405,0.768436610643109,8.70992743391212,8.23536223823313,9.25429829946081,1.42825492201902,3.3130281142742,6.85948475603743,7.85932862349538,11.0306254393203,1.10115880999389,1.27687338085188,1.0752457327937,5.53922408466814,5.48925861614458,4.16730696445408,0.837548997004143,1.68828783009504,0.916789486660861,1.47314292736834,3.27454865837937,4.47358669980721,2.34751199332871,2.11600368298999,8.40607017234866,3.44169550792555,4.75979933595425,1.61910957491345,3.24888208723835,2.24013443548668,0.983110940922263,1.70430322578058,1.29893002301434,1.41335829804136,2.81686839553361,2.56652954828636,12.7402619853323,7.11066703153331,3.68034769719064,2.28023878927589,2.52762222507392,3.53970027129086,8.2860122767095,3.41416919849097,1.90833859442749,1.52232739156071,1.84492397804847,2.11011696773672,1.76383060703557,2.76466500925286,2.22475470960936,3.18118585223806,0.884610551949874,3.23533699894818,4.41683036920787,3.39412677194655,0,7.31951992528868,7.12118803165747,4.85368404896324,4.79260498023681,5.39912457894067,2.54140454146129,1.04853447583376,2.74500361691176,3.26701315493447,0.521472960576829,0.511430914660661,1.66230435647648,1.94689515681309,3.36069900706044,4.97627882440372,3.53811861807145,5.05060454127538,4.42409506073193,5.74755261083682,4.86167750474443,3.91832526372859,5.17077393550092,4.22775276940004,4.8724896771059,3.3631438196072,7.97601573851516,7.37513712654495,4.57472922826267,5.04150184583422,2.78047249225598,5.57203466435466,3.70407845534298,3.78165106955137,5.61770549850588,5.66165395652373,5.11494298912067,4.97101854085205,5.39409937956521,3.42117916775928,4.26140524053378,3.93528463494808,2.93107514486019,4.88321283975857,4.02410102099429,6.07179780309281,3.94943639792353,3.2833492815819,3.64809642956351,2.77779976108131,3.51280184465681,2.41571553768669,1.05144974282064,2.57261530948211,8.92130714056255,3.43785736662608,4.90562976231038,4.64473343720877,5.92790322081629,5.84882221407693,5.78182913996663,5.1360919050391,6.64340686162316,3.29397909448022,2.76468729680296,4.77495532898762,6.23885078781184,5.39291645192533,5.18731319699266,5.57595565112228,6.82804443431094,3.77020091612105,7.88954149711563,3.46207257337034,3.10323979468201,4.9095073923223,4.23684798732524,4.87113488332687,3.61097074035162,3.08492909804501,2.37162101669719,3.33690211432188,2.55526693647164,2.69834534861824,2.43432145666204,0.964708639009667,3.31013607315846,4.02774592431135,2.59416362840057,2.19649130550465,0,1.48856379067401,2.18426371180192,2.52578877947112,3.76734568396016,5.30687873499704,3.51031061316549,4.54779388249163,4.4000543639347,3.22515662972857,4.22442446919304,4.35516269348721,6.66522194480839,4.87834119644497,5.67486518782288,4.4292937929755,5.26200736569707,2.29408640602033,3.10832967358612,4.05017364028232,3.01582567878545,2.17562273527484,3.44234991113325,4.96686143348518,0.642202359951168,1.05490517932983,0.983609672260053,4.54447668967871,6.31016438832513,5.85658116444958,7.97066571611356,5.4962823529087,5.79276552614225,11.0399847007645,10.5250782435473,4.9683495844923,8.69633111482352,6.42642632843614,8.23252494207958,3.02711526234334,3.58351310577867,3.95928295134085,6.63725691699814,3.39892890616974,2.41858845571801,3.20628635585027,2.06711325016541,3.68922177532713,5.94385074286909,6.90714086007261,2.49548164869305,4.42451461110142,5.27093042874994,3.09406629744561,2.7235168460303,3.96134406868882,2.97524972700335,4.92975180572662,3.3694644392032,3.38900753443934,3.29098041204242,3.65357938937519,2.3467170806371,2.1183207086382,3.96951116498931,5.7710188529518,3.71368181400583,4.58378229453985,4.65552141612232,5.41664969158702,4.37221254944776,1.66882771809459,3.07567585436135,4.12773735926445,2.40752885580625,1.88368457004691,2.59719032669948,4.57556346413045,6.28920190977265,5.87796099759364,5.11339903076368,3.81868247206045,7.27572785236611,6.30290348093231,3.56417624711944,5.43629569637619,3.27543845619266,3.3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| ||
|short_description=p3@Usp3 | |short_description=p3@Usp3 | ||
}} | }} |
Latest revision as of 00:54, 27 September 2015
Short description: | p3@Usp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Usp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3721 |
Association with transcript: | 0bp_to_NM_144937, uc009qey.1, uc009qez.1, uc012gvp.1_5end |
EntrezGene: | Usp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of gut | 4.21e-08 | 24 |
anterior region of body | 1.15e-07 | 43 |
thymus | 1.41e-07 | 23 |
neck | 1.41e-07 | 23 |
respiratory system epithelium | 1.41e-07 | 23 |
hemolymphoid system gland | 1.41e-07 | 23 |
pharyngeal epithelium | 1.41e-07 | 23 |
thymic region | 1.41e-07 | 23 |
pharyngeal gland | 1.41e-07 | 23 |
entire pharyngeal arch endoderm | 1.41e-07 | 23 |
thymus primordium | 1.41e-07 | 23 |
early pharyngeal endoderm | 1.41e-07 | 23 |
pharynx | 1.72e-07 | 24 |
upper respiratory tract | 1.72e-07 | 24 |
chordate pharynx | 1.72e-07 | 24 |
pharyngeal arch system | 1.72e-07 | 24 |
pharyngeal region of foregut | 1.72e-07 | 24 |
craniocervical region | 5.57e-07 | 36 |