FFCP PHASE1:Mm9::chr9:66440752..66440776,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:66440752..66440776,- to FFCP PHASE1:Mm9::chr9:66440752..66440776,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=235441 | |EntrezGene=235441 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3721 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000034940_5end | |||
|cluster_id=chr9:66440752..66440776,- | |||
|description=CAGE_peak_2_at_Usp3_5end | |||
|id=chr9:66440752..66440776,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.31e-08!23;UBERON:0000974!2.31e-08!23;UBERON:0004807!2.31e-08!23;UBERON:0005058!2.31e-08!23;UBERON:0003351!2.31e-08!23;UBERON:0009113!2.31e-08!23;UBERON:0003295!2.31e-08!23;UBERON:0009722!2.31e-08!23;UBERON:0005562!2.31e-08!23;UBERON:0007690!2.31e-08!23;UBERON:0003408!2.75e-08!24;UBERON:0006562!2.78e-08!24;UBERON:0001557!2.78e-08!24;UBERON:0001042!2.78e-08!24;UBERON:0008814!2.78e-08!24;UBERON:0009145!2.78e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.31e-08,23;UBERON:0000974,2.31e-08,23;UBERON:0004807,2.31e-08,23;UBERON:0005058,2.31e-08,23;UBERON:0003351,2.31e-08,23;UBERON:0009113,2.31e-08,23;UBERON:0003295,2.31e-08,23;UBERON:0009722,2.31e-08,23;UBERON:0005562,2.31e-08,23;UBERON:0007690,2.31e-08,23;UBERON:0003408,2.75e-08,24;UBERON:0006562,2.78e-08,24;UBERON:0001557,2.78e-08,24;UBERON:0001042,2.78e-08,24;UBERON:0008814,2.78e-08,24;UBERON:0009145,2.78e-08,24;UBERON:0007811,3.59e-08,36;UBERON:0000153,4.56e-08,43 | |||
|phase1_expression=5.44506080156299,6.97950815278722,8.64498554840118,12.40103266358,16.5295590882295,10.0727563147134,7.00837921786577,22.5965816022758,11.82625266074,14.0438715793196,5.30775701499065,5.18519033469687,17.6336751829142,14.9488888136486,1.66554880907831,2.42970320867791,4.19737126876888,11.5143690355757,8.77532375076728,9.76096199135469,4.93251082876205,11.1205865344992,9.40319240900167,4.7997726838022,7.34109699414944,2.8711598205751,6.46142994238612,10.3426191689227,6.27077284206034,8.82105454159758,7.09537634096975,6.98533740805594,3.07532393792285,15.8481681015439,8.95440021228951,6.64938581433969,7.75843553797003,12.5559489221072,13.2827008569046,8.37637990358077,11.7646297606203,13.6609096991689,7.2826552954673,2.01434908760924,2.23029248682932,1.83546752161682,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,2.09979632438044,0,8.38913030288682,24.6623128283857,24.1987535382574,3.08711323243136,4.01146815914259,1.54701627683233,7.08107613008592,4.7609188134483,6.97214543856797,1.0165335962074,1.77858959222228,0.899899717281399,0,1.4209602298922,0.898800331555214,1.92109152660777,12.3390638647088,10.6654691282036,9.25429829946081,3.14216082844184,3.75476519617743,7.96190194897201,7.85932862349538,14.7075005857603,0,0.638436690425939,1.38245879930619,8.04506355154182,4.7573574673253,5.2091337055676,1.67509799400829,0.56276261003168,0.916789486660861,1.17851434189467,3.13217697758026,6.15118171223492,2.65041676666144,1.96486056277642,19.1310562543107,3.44169550792555,15.6393406752783,3.2382191498269,2.59910566979068,2.68816132258401,2.52799956237153,1.02258193546835,1.03914401841148,1.7666978725517,6.19711047017394,3.84979432242953,2.54805239706646,14.2213340630666,4.5463118612355,3.54703811665138,4.54972000513305,5.36664234679582,8.54495016035667,3.71105347662062,5.89850111004862,5.48037860961854,4.61230994512117,4.97384713823654,5.99702406392095,3.89566433121994,5.43828929015623,2.60278842455841,2.65383165584962,2.75003644910596,5.30019644304944,4.84875253135222,5.59175283654366,14.3462590535658,23.0391377494801,6.13096932500619,14.6174451897223,10.1983464268879,12.1987417990142,1.04853447583376,0.915001205637253,2.76439574648302,1.73824320192276,1.02286182932132,0.83115217823824,1.78465389374533,6.41587992256993,5.59831367745419,4.29628689337247,7.99679052368601,8.19758790665033,5.51765050640335,6.66229880279792,6.78171680260718,9.45707338203457,11.0177799444971,9.37017245597288,4.9153640440413,15.089759505299,12.1027891307404,8.09375171154165,5.04150184583422,4.72680323683516,6.268538997399,4.7329891373827,6.17006227137329,6.31991868581911,9.26452465612975,11.6507034752193,10.3562886267751,6.80125573945179,6.84235833551856,6.15536312521547,4.72234156193769,6.17068451549513,5.34828072925938,4.02410102099429,9.92505410120941,6.25327429671226,6.07419617092652,4.29664690593035,5.26319954731196,3.07370161407471,4.56301823785264,1.05144974282064,6.48299057989492,12.8863325363681,6.87571473325215,11.3042772783674,9.0572302025571,9.40732467651281,9.4791256572971,6.67134131534611,7.03834816616469,7.59246498471219,9.22314146454461,7.79139147280835,10.9426059622633,7.79856348476481,4.49409704327111,6.70027954611552,10.9527700289902,7.77638393907635,7.31190480702264,9.01661885384643,8.5533557695032,6.98228953803453,12.554311760367,8.97958827164453,5.90440591918409,5.65195420228949,6.66344685177723,3.85388415213294,2.50267658574141,2.94838492669805,2.69834534861824,2.23146133527353,5.30589751455317,3.8193877767213,3.16465751195892,6.97181475132652,4.3929826110093,7.18841032636773,7.07067800570156,5.30464044294753,3.78868316920668,5.56131981917928,11.5786445127208,3.14080423283228,5.87423376488503,6.19266910479698,5.7713329163564,7.97946844180907,7.03526281255626,9.99783291721258,9.36641509717434,7.72412206120336,4.87222317227305,7.33491935824441,3.4411296090305,4.66249451037918,7.95569822198314,3.01582567878545,2.17562273527484,2.45882136509518,5.24279817978992,1.28440471990234,1.17211686592203,2.95082901678016,5.55436039849621,11.6738041184015,14.4462335389756,10.3403230911743,10.7535959078648,9.13474563737816,14.1538265394416,12.1443210502468,7.3063964477828,10.2774822266096,3.53453448063988,18.8780313326997,2.67098405500883,6.35259141478947,5.77395430403874,3.98235415019888,8.74010290157933,3.62788268357701,5.09233715340925,3.83892460745005,7.99331384654211,8.26970538138308,5.81653967164009,9.62542921638748,5.68866164284469,1.05418608574999,5.15677716240934,3.06395645178409,7.38250485528372,3.49268446213437,7.07312215604255,6.0295679438373,6.24290861607247,5.92376474167636,6.39376393140658,4.22409074514679,2.1183207086382,3.30792597082443,7.09010887648364,12.5942252822806,8.26287071515735,9.78853220825719,10.1767357841938,7.28702091574627,0.556275906031529,3.07567585436135,5.98521917093345,4.25947412950337,2.44878994106098,3.14396723758358,3.66045077130436,16.487907709404,19.7331547776358,16.8603968041397,6.68269432610579,8.69923982348122,8.3360981522008,6.48032044930808,7.5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| |phase1_expression=5.44506080156299,6.97950815278722,8.64498554840118,12.40103266358,16.5295590882295,10.0727563147134,7.00837921786577,22.5965816022758,11.82625266074,14.0438715793196,5.30775701499065,5.18519033469687,17.6336751829142,14.9488888136486,1.66554880907831,2.42970320867791,4.19737126876888,11.5143690355757,8.77532375076728,9.76096199135469,4.93251082876205,11.1205865344992,9.40319240900167,4.7997726838022,7.34109699414944,2.8711598205751,6.46142994238612,10.3426191689227,6.27077284206034,8.82105454159758,7.09537634096975,6.98533740805594,3.07532393792285,15.8481681015439,8.95440021228951,6.64938581433969,7.75843553797003,12.5559489221072,13.2827008569046,8.37637990358077,11.7646297606203,13.6609096991689,7.2826552954673,2.01434908760924,2.23029248682932,1.83546752161682,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,2.09979632438044,0,8.38913030288682,24.6623128283857,24.1987535382574,3.08711323243136,4.01146815914259,1.54701627683233,7.08107613008592,4.7609188134483,6.97214543856797,1.0165335962074,1.77858959222228,0.899899717281399,0,1.4209602298922,0.898800331555214,1.92109152660777,12.3390638647088,10.6654691282036,9.25429829946081,3.14216082844184,3.75476519617743,7.96190194897201,7.85932862349538,14.7075005857603,0,0.638436690425939,1.38245879930619,8.04506355154182,4.7573574673253,5.2091337055676,1.67509799400829,0.56276261003168,0.916789486660861,1.17851434189467,3.13217697758026,6.15118171223492,2.65041676666144,1.96486056277642,19.1310562543107,3.44169550792555,15.6393406752783,3.2382191498269,2.59910566979068,2.68816132258401,2.52799956237153,1.02258193546835,1.03914401841148,1.7666978725517,6.19711047017394,3.84979432242953,2.54805239706646,14.2213340630666,4.5463118612355,3.54703811665138,4.54972000513305,5.36664234679582,8.54495016035667,3.71105347662062,5.89850111004862,5.48037860961854,4.61230994512117,4.97384713823654,5.99702406392095,3.89566433121994,5.43828929015623,2.60278842455841,2.65383165584962,2.75003644910596,5.30019644304944,4.84875253135222,5.59175283654366,14.3462590535658,23.0391377494801,6.13096932500619,14.6174451897223,10.1983464268879,12.1987417990142,1.04853447583376,0.915001205637253,2.76439574648302,1.73824320192276,1.02286182932132,0.83115217823824,1.78465389374533,6.41587992256993,5.59831367745419,4.29628689337247,7.99679052368601,8.19758790665033,5.51765050640335,6.66229880279792,6.78171680260718,9.45707338203457,11.0177799444971,9.37017245597288,4.9153640440413,15.089759505299,12.1027891307404,8.09375171154165,5.04150184583422,4.72680323683516,6.268538997399,4.7329891373827,6.17006227137329,6.31991868581911,9.26452465612975,11.6507034752193,10.3562886267751,6.80125573945179,6.84235833551856,6.15536312521547,4.72234156193769,6.17068451549513,5.34828072925938,4.02410102099429,9.92505410120941,6.25327429671226,6.07419617092652,4.29664690593035,5.26319954731196,3.07370161407471,4.56301823785264,1.05144974282064,6.48299057989492,12.8863325363681,6.87571473325215,11.3042772783674,9.0572302025571,9.40732467651281,9.4791256572971,6.67134131534611,7.03834816616469,7.59246498471219,9.22314146454461,7.79139147280835,10.9426059622633,7.79856348476481,4.49409704327111,6.70027954611552,10.9527700289902,7.77638393907635,7.31190480702264,9.01661885384643,8.5533557695032,6.98228953803453,12.554311760367,8.97958827164453,5.90440591918409,5.65195420228949,6.66344685177723,3.85388415213294,2.50267658574141,2.94838492669805,2.69834534861824,2.23146133527353,5.30589751455317,3.8193877767213,3.16465751195892,6.97181475132652,4.3929826110093,7.18841032636773,7.07067800570156,5.30464044294753,3.78868316920668,5.56131981917928,11.5786445127208,3.14080423283228,5.87423376488503,6.19266910479698,5.7713329163564,7.97946844180907,7.03526281255626,9.99783291721258,9.36641509717434,7.72412206120336,4.87222317227305,7.33491935824441,3.4411296090305,4.66249451037918,7.95569822198314,3.01582567878545,2.17562273527484,2.45882136509518,5.24279817978992,1.28440471990234,1.17211686592203,2.95082901678016,5.55436039849621,11.6738041184015,14.4462335389756,10.3403230911743,10.7535959078648,9.13474563737816,14.1538265394416,12.1443210502468,7.3063964477828,10.2774822266096,3.53453448063988,18.8780313326997,2.67098405500883,6.35259141478947,5.77395430403874,3.98235415019888,8.74010290157933,3.62788268357701,5.09233715340925,3.83892460745005,7.99331384654211,8.26970538138308,5.81653967164009,9.62542921638748,5.68866164284469,1.05418608574999,5.15677716240934,3.06395645178409,7.38250485528372,3.49268446213437,7.07312215604255,6.0295679438373,6.24290861607247,5.92376474167636,6.39376393140658,4.22409074514679,2.1183207086382,3.30792597082443,7.09010887648364,12.5942252822806,8.26287071515735,9.78853220825719,10.1767357841938,7.28702091574627,0.556275906031529,3.07567585436135,5.98521917093345,4.25947412950337,2.44878994106098,3.14396723758358,3.66045077130436,16.487907709404,19.7331547776358,16.8603968041397,6.68269432610579,8.69923982348122,8.3360981522008,6.48032044930808,7.5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| ||
|short_description=p2@Usp3 | |||
}} | }} |
Latest revision as of 00:54, 27 September 2015
Short description: | p2@Usp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Usp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3721 |
Association with transcript: | 0bp_to_ENSMUST00000034940_5end |
EntrezGene: | Usp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.31e-08 | 23 |
neck | 2.31e-08 | 23 |
respiratory system epithelium | 2.31e-08 | 23 |
hemolymphoid system gland | 2.31e-08 | 23 |
pharyngeal epithelium | 2.31e-08 | 23 |
thymic region | 2.31e-08 | 23 |
pharyngeal gland | 2.31e-08 | 23 |
entire pharyngeal arch endoderm | 2.31e-08 | 23 |
thymus primordium | 2.31e-08 | 23 |
early pharyngeal endoderm | 2.31e-08 | 23 |
gland of gut | 2.75e-08 | 24 |
pharynx | 2.78e-08 | 24 |
upper respiratory tract | 2.78e-08 | 24 |
chordate pharynx | 2.78e-08 | 24 |
pharyngeal arch system | 2.78e-08 | 24 |
pharyngeal region of foregut | 2.78e-08 | 24 |
craniocervical region | 3.59e-08 | 36 |
anterior region of body | 4.56e-08 | 43 |