Personal tools

FFCP PHASE1:Mm9::chr1:195128193..195128223,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16780
|EntrezGene=16780
|HGNC=
|HGNC=
|MCL_coexpression_id=2302
|TSSclassifier=NA
|UniProt=Q61087,Q8C5B3
|UniProt=Q61087,Q8C5B3
|association_with_transcript=5bp_to_NM_008484,uc007eek.1_5end
|association_with_transcript=5bp_to_NM_008484,uc007eek.1_5end
|cluster_id=chr1:195128193..195128223,+
|description=CAGE_peak_3_at_Lamb3_5end
|description=CAGE_peak_3_at_Lamb3_5end
|id=chr1:195128193..195128223,+
|id=chr1:195128193..195128223,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002076,4.45e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.18e-19!130;UBERON:0000925!2.18e-19!130;UBERON:0006595!2.18e-19!130;UBERON:0001007!3.11e-19!128;UBERON:0001555!3.11e-19!128;UBERON:0007026!3.11e-19!128;UBERON:0004921!6.71e-18!126;UBERON:0004185!6.71e-18!126;UBERON:0005409!3.44e-14!59;UBERON:0000160!9.79e-13!43;UBERON:0005178!4.27e-10!17;UBERON:0005181!4.27e-10!17;UBERON:0002224!4.27e-10!17;UBERON:0000915!4.27e-10!17;UBERON:0008947!4.27e-10!17;UBERON:0003258!4.27e-10!17;UBERON:0005153!1.51e-09!17;UBERON:0000344!2.35e-09!15;UBERON:0001004!1.25e-08!42;UBERON:0000065!3.15e-08!41;UBERON:0002048!5.09e-08!14;UBERON:0000117!5.09e-08!14;UBERON:0000171!5.09e-08!14;UBERON:0000170!5.09e-08!14;UBERON:0005597!5.09e-08!14;UBERON:0000118!5.09e-08!14;UBERON:0001242!6.64e-08!13;UBERON:0000060!6.64e-08!13;UBERON:0001262!6.64e-08!13;UBERON:0004786!6.64e-08!13;UBERON:0000077!1.11e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0001007,7.08e-18,116;UBERON:0001555,7.08e-18,116;UBERON:0007026,7.08e-18,116;UBERON:0004119,1.07e-17,118;UBERON:0000925,1.07e-17,118;UBERON:0006595,1.07e-17,118;UBERON:0004921,1.94e-16,114;UBERON:0005409,3.91e-11,47;UBERON:0005178,5.61e-11,17;UBERON:0005181,5.61e-11,17;UBERON:0002224,5.61e-11,17;UBERON:0000915,5.61e-11,17;UBERON:0008947,5.61e-11,17;UBERON:0003258,5.61e-11,17;UBERON:0000344,5.68e-11,15;UBERON:0001004,7.56e-11,42;UBERON:0000065,2.36e-10,41;UBERON:0005153,2.40e-10,17;UBERON:0000160,1.59e-09,31;UBERON:0001242,3.19e-09,13;UBERON:0001262,3.19e-09,13;UBERON:0004786,3.19e-09,13;UBERON:0002048,1.63e-08,14;UBERON:0000117,1.63e-08,14;UBERON:0000171,1.63e-08,14;UBERON:0000170,1.63e-08,14;UBERON:0005597,1.63e-08,14;UBERON:0000118,1.63e-08,14;UBERON:0005157,7.45e-08,20
|phase1_expression=0.160148847104794,102.598769845972,120.119799198838,3.0246421130683,3.00537437967808,30.7219067598758,22.8940387783615,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,57.437279782833,53.6817717697178,66.0366758732273,45.2300095967028,49.3429122850686,15.0118501370535,6.04872311423834,28.381505363879,0,0,0,4.04392267651784,3.15845826181135,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,3.76823835312181,0,0,0,0,0,2.10666630197628,0,0,0,0.704217098883403,1.28326477414318,0,0,32.2571651106709,33.6968621081881,37.9143333761088,2.16949371466214,0,0.148442139064825,0,0,0.461230994512117,0.452167921657868,0.117588707135705,0,56.3604526434372,0,0,0.161766849947409,0,0,31.6865994070808,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.870848794270651,1.26361379216837,3.15662783829711,0,0,0.720248519221397,0.90422890701429,0.748401490664606,0.12811372028485,0.374806898238915,2.06962696591213,0.646703978798527,0.945530400839096,1.05570674498369,0.876782929710299,1.94633074457919,3.1342694986995,4.11564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,0.210289948564127,0,16.5209391491899,12.164726066523,0.213288250535234,0.696710015581316,0.77320476793256,0.403367049246685,0.889512175379481,0.380451252225118,6.16887780007865,0.988193728344065,3.51869292320377,3.78017296878187,2.14460495831032,6.29173586057955,9.51007419448655,11.1519113022446,0,0.228497025219458,0,0.203651327845314,0,0.49095073923223,0.569128834118316,1.62371162777562,1.41298855057237,0.863780147452604,0,0.166845105716094,0,0,0,0,0.25462585178142,2.30156909960649,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,17.1820466854942,0.947457058852424,1.79261474086228,2.37643120085263,8.21415869009757,15.7455881995307,21.6619713206272,14.6350235893349,13.8718926813448,17.717175171902,19.1345722388985,13.764518436122,18.6499780415167,18.370430439852,0,0,13.769399644533,18.4877620024171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.890328018336276,0.81443479676788,1.97964147567043,1.32745138339963,0,0.302323556964751,0.565815239267694,1.77181135728464,1.53717573971964,2.06742634534577,1.81766864738753,3.20847640546249,4.42451461110142,8.4334886859999,6.18813259489121,0.340439605753788,0,0,0.214337035031592,0,0,0.329098041204242,0.913394847343798,0.23467170806371,1.48282449604674,3.52845436887939,10.5527201882547,6.45857706783622,5.36785031860587,7.87857470420701,6.89391778929257,5.53813589596716,0,0,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0,0.276399947608848,12.4107180341965,1.10717597753397,3.04979200690273,3.02414954301044,6.27264888043406,7.20596460362386,13.7561633312517,15.9521169549898,15.1818446350737,22.9418502726473,6.21339313086926,0,0,0,0,0.129159823477731,0.506868376472335,0,0,0,0,0,3.16011120628178,3.24360344464263,4.10843828659309,3.11809975146708,4.833720783022,4.17230845040656,3.36547258655913,2.06765338044408,1.9183625490148,2.59103142626999,1.51239277705261,1.36441033035653,2.5977197242889,1.63627663054197,7.70883304291719,0,0,0,7.72758376128762,2.064507229963,8.42497471629419,12.0046292284277,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,1.21553358534147,0,0.551530525350042,2.00022055021454,1.85431551515005,1.60459604795908,1.01078884705519,2.5347929989024,1.50901073108861,1.96647165686753,1.21647789569252,1.78049953762401,0.952587382566147,1.73826488917283,2.12200142510076,1.64834360321323,1.03039244094078,2.74295401908332,1.24233064311536,1.1921809497366,2.47088908274958,1.50575008664529,1.77690676572521,2.56099162021882,3.6829759601298,2.58027816307137,1.68342681497322,1.54225523561426,1.18205378850676,1.22769312950907,2.94379998253335,2.12197272079256,2.49810577937946,2.57324769289949,2.79332370262788,0.382576664137687,1.54413993383661,0.231867835620421
|phase1_expression=0.160148847104794,102.598769845972,120.119799198838,3.0246421130683,3.00537437967808,30.7219067598758,22.8940387783615,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,57.437279782833,53.6817717697178,66.0366758732273,45.2300095967028,49.3429122850686,15.0118501370535,6.04872311423834,28.381505363879,0,0,0,4.04392267651784,3.15845826181135,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,3.76823835312181,0,0,0,0,0,2.10666630197628,0,0,0,0.704217098883403,1.28326477414318,0,0,32.2571651106709,33.6968621081881,37.9143333761088,2.16949371466214,0,0.148442139064825,0,0,0.461230994512117,0.452167921657868,0.117588707135705,0,56.3604526434372,0,0,0.161766849947409,0,0,31.6865994070808,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.870848794270651,1.26361379216837,3.15662783829711,0,0,0.720248519221397,0.90422890701429,0.748401490664606,0.12811372028485,0.374806898238915,2.06962696591213,0.646703978798527,0.945530400839096,1.05570674498369,0.876782929710299,1.94633074457919,3.1342694986995,4.11564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,0.210289948564127,0,16.5209391491899,12.164726066523,0.213288250535234,0.696710015581316,0.77320476793256,0.403367049246685,0.889512175379481,0.380451252225118,6.16887780007865,0.988193728344065,3.51869292320377,3.78017296878187,2.14460495831032,6.29173586057955,9.51007419448655,11.1519113022446,0,0.228497025219458,0,0.203651327845314,0,0.49095073923223,0.569128834118316,1.62371162777562,1.41298855057237,0.863780147452604,0,0.166845105716094,0,0,0,0,0.25462585178142,2.30156909960649,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,17.1820466854942,0.947457058852424,1.79261474086228,2.37643120085263,8.21415869009757,15.7455881995307,21.6619713206272,14.6350235893349,13.8718926813448,17.717175171902,19.1345722388985,13.764518436122,18.6499780415167,18.370430439852,0,0,13.769399644533,18.4877620024171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.890328018336276,0.81443479676788,1.97964147567043,1.32745138339963,0,0.302323556964751,0.565815239267694,1.77181135728464,1.53717573971964,2.06742634534577,1.81766864738753,3.20847640546249,4.42451461110142,8.4334886859999,6.18813259489121,0.340439605753788,0,0,0.214337035031592,0,0,0.329098041204242,0.913394847343798,0.23467170806371,1.48282449604674,3.52845436887939,10.5527201882547,6.45857706783622,5.36785031860587,7.87857470420701,6.89391778929257,5.53813589596716,0,0,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0,0.276399947608848,12.4107180341965,1.10717597753397,3.04979200690273,3.02414954301044,6.27264888043406,7.20596460362386,13.7561633312517,15.9521169549898,15.1818446350737,22.9418502726473,6.21339313086926,0,0,0,0,0.129159823477731,0.506868376472335,0,0,0,0,0,3.16011120628178,3.24360344464263,4.10843828659309,3.11809975146708,4.833720783022,4.17230845040656,3.36547258655913,2.06765338044408,1.9183625490148,2.59103142626999,1.51239277705261,1.36441033035653,2.5977197242889,1.63627663054197,7.70883304291719,0,0,0,7.72758376128762,2.064507229963,8.42497471629419,12.0046292284277,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,1.21553358534147,0,0.551530525350042,2.00022055021454,1.85431551515005,1.60459604795908,1.01078884705519,2.5347929989024,1.50901073108861,1.96647165686753,1.21647789569252,1.78049953762401,0.952587382566147,1.73826488917283,2.12200142510076,1.64834360321323,1.03039244094078,2.74295401908332,1.24233064311536,1.1921809497366,2.47088908274958,1.50575008664529,1.77690676572521,2.56099162021882,3.6829759601298,2.58027816307137,1.68342681497322,1.54225523561426,1.18205378850676,1.22769312950907,2.94379998253335,2.12197272079256,2.49810577937946,2.57324769289949,2.79332370262788,0.382576664137687,1.54413993383661,0.231867835620421
|short_description=p3@Lamb3
|short_description=p3@Lamb3
}}
}}

Latest revision as of 00:40, 27 September 2015

Short description:p3@Lamb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lamb3_5end
Coexpression cluster:MCL_coexpression_mm9:2302
Association with transcript: 5bp_to_NM_008484, uc007eek.1_5end
EntrezGene:Lamb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lamb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5102.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6120.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I730.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D157.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D253.68
GP2+ M cell, pool1.CNhs13228.11845-124H966.04
GP2+ M cell, pool2.CNhs13231.11846-124I145.23
GP2+ M cell, pool3.CNhs13240.11847-124I249.34
Ileum epithelium, pool1.CNhs13199.10252-104B915.01
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G132.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G233.70
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G337.91
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A856.36
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H431.69
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I316.52
intestine, adult.CNhs10496.178-9A312.16
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E39.51
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B117.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I621.66
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E513.87
lung, neonate N07.CNhs11111.715-19A317.72
lung, neonate N10.CNhs11219.750-23E619.13
lung, neonate N20.CNhs11109.822-18A413.76
lung, neonate N25.CNhs11119.1359-25C718.65
lung, neonate N30.CNhs11133.1394-42H218.37
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H218.49
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C310.55
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H35.37
skin, neonate N06.CNhs11097.693-20I57.88
skin, neonate N10.CNhs11108.762-6C46.89
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B813.76
stomach, neonate N07.CNhs11210.718-18A915.95
stomach, neonate N25.CNhs11104.1355-25E415.18
stomach, neonate N30.CNhs11134.1386-42I122.94
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endo-epithelial cell4.45e-0715

Uber anatomy
Ontology termp-valuen
digestive system7.08e-18116
digestive tract7.08e-18116
primitive gut7.08e-18116
endoderm-derived structure1.07e-17118
endoderm1.07e-17118
presumptive endoderm1.07e-17118
subdivision of digestive tract1.94e-16114
gastrointestinal system3.91e-1147
thoracic cavity element5.61e-1117
thoracic segment organ5.61e-1117
thoracic cavity5.61e-1117
thoracic segment of trunk5.61e-1117
respiratory primordium5.61e-1117
endoderm of foregut5.61e-1117
mucosa5.68e-1115
respiratory system7.56e-1142
respiratory tract2.36e-1041
epithelial bud2.40e-1017
intestine1.59e-0931
intestinal mucosa3.19e-0913
wall of intestine3.19e-0913
gastrointestinal system mucosa3.19e-0913
lung1.63e-0814
respiratory tube1.63e-0814
respiration organ1.63e-0814
pair of lungs1.63e-0814
lung primordium1.63e-0814
lung bud1.63e-0814
epithelial fold7.45e-0820
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:195128193..195128223,%2B&oldid=4283203"