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FFCP PHASE1:Mm9::chr4:44025533..44025566,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:44025533..44025566,+
|DHSsupport=NA
|short_description=p1@Clta
|DPIdataset=NA
|description=CAGE_peak_1_at_Clta_5end
|association_with_transcript=0bp_to_ENSMUST00000078664,ENSMUST00000107845,ENSMUST00000107849,ENSMUST00000107851_5end
|EntrezGene=12757
|EntrezGene=12757
|HGNC=
|HGNC=
|MCL_coexpression_id=247
|TSSclassifier=NA
|UniProt=E9QM56,B1AWE0,B1AWD8,B1AWD9
|UniProt=E9QM56,B1AWE0,B1AWD8,B1AWD9
|association_with_transcript=0bp_to_ENSMUST00000078664,ENSMUST00000107845,ENSMUST00000107849,ENSMUST00000107851_5end
|cluster_id=chr4:44025533..44025566,+
|description=CAGE_peak_1_at_Clta_5end
|id=chr4:44025533..44025566,+
|ontology_enrichment_celltype=CL:0000144!4.08e-20!121;CL:0000012!4.08e-20!121;CL:0002371!8.67e-20!118;CL:0000548!5.13e-18!115;CL:0000004!5.13e-18!115;CL:0000255!5.13e-18!115;CL:0000034!8.18e-14!97;CL:0000723!5.99e-12!91;CL:0000048!5.99e-12!91;CL:0000055!4.08e-11!50;CL:0002321!1.05e-10!70;CL:0000220!1.05e-10!70;CL:0002319!1.44e-08!43;CL:0000221!1.82e-08!44;CL:0000133!1.82e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000034,8.18e-14,97;CL:0000723,5.99e-12,91;CL:0000048,5.99e-12,91;CL:0002321,1.05e-10,70;CL:0002319,1.44e-08,43;CL:0000221,1.82e-08,44;CL:0000133,1.82e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.00e-08!75;UBERON:0001016!1.00e-08!75;UBERON:0001017!2.91e-08!73;UBERON:0005743!2.91e-08!73;UBERON:0000344!4.04e-07!15;UBERON:0002204!9.75e-07!32
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.00e-08,75;UBERON:0001017,2.91e-08,73;UBERON:0000160,3.36e-07,31;UBERON:0000344,4.04e-07,15;UBERON:0002204,9.75e-07,32
|phase1_expression=329.426178494561,485.424792026351,490.48918006192,627.915702672979,564.008591919587,329.211252219216,364.43571932902,258.504893530036,185.700324518048,198.252653794728,187.312457238702,192.490219655747,263.649124094057,253.256905807835,274.14933397429,242.160419798232,228.756734147904,370.983506461288,352.109865499537,395.106765823966,157.585216649932,346.823292544692,383.702490245096,368.782534538802,384.948773630711,488.097169497767,480.299625717368,392.804057186376,464.987307409747,381.321586326775,423.283544840977,177.808588568697,152.536067320973,253.570689624702,361.064524689093,315.845826181135,364.646470284591,493.867324269551,596.15886787166,503.629841702794,388.232782100469,432.367791978696,472.887083852344,456.250068343492,400.94576297318,333.687995429937,816.816563499353,426.893256192914,423.994332677531,447.188767870852,484.213032402129,540.509642012293,368.450602902789,229.939799017596,256.775662544842,415.216729762018,483.668446616621,396.036166869076,295.988982237592,449.113341401956,416.42723210356,602.465578018917,717.660900461689,1334.55128072831,1765.12645718205,1608.52698023797,718.441065023135,679.68218211383,223.451114524769,268.796823218396,267.533350838958,401.339633087344,429.147575068985,279.524003808525,256.578325915819,325.403450459947,356.775454438019,251.416368689735,288.473069455225,359.258247777048,344.816928737482,323.487203115748,345.62855276371,352.852156489863,276.259231980473,337.938987538297,303.536423463687,317.251856794662,331.52927441268,351.256611376339,361.750881899694,324.379801621983,280.828160821301,241.247326662104,161.144551527022,185.0351043712,186.229301094703,301.150379995428,388.120290876686,384.786796641761,267.884184415246,248.953366183777,142.690934235722,85.3280043783997,282.087826437612,284.523128928536,251.245649172347,241.72727336525,235.115598351632,200.100003459384,278.79092011318,336.738819013228,262.671051374651,271.300752994721,225.29996287201,179.577559010106,330.005281925389,131.4408154402,222.921859091368,230.194227475163,171.152176806805,205.102232076199,311.274241234264,167.177835093593,192.481523561565,315.48946318261,474.467893043444,437.928993625188,481.342020152769,264.230687910107,276.33036410245,245.528604028537,273.251831342259,310.949996113682,254.540354585461,256.503436910125,286.270451783239,274.441777165865,417.750719690864,190.028995865486,262.583053898736,267.606049560562,225.977972905713,215.357184687237,192.271146601653,192.939262748984,190.589307754488,229.211186474768,221.388328742029,185.702170724799,199.17667255359,252.513483756566,254.135185792196,206.513534747645,234.797417641463,268.497225938147,591.263503717744,375.727944387484,328.777168800701,181.4421767411,235.229638161039,214.63397726153,175.191104333056,192.435418648961,185.429069690629,165.09910077279,140.5752623334,173.163002730512,124.242686684678,149.556559776056,126.629480510627,135.673588330708,158.515183240139,163.731830887654,267.909394470698,248.617543508351,381.633694346287,273.177435363441,244.215046862843,236.649168625787,219.590154092847,252.306089303802,312.885907689733,376.646739702867,316.036354988645,428.7113791466,383.537528629211,390.551554616779,356.589315340871,286.723391360697,338.472186103771,342.323848724257,325.849453837394,231.81023208514,224.28839398943,258.229883707858,259.314475343116,246.036456175238,233.722241211255,234.257304843629,266.426841146813,307.752526820971,292.302290307929,207.221621299389,227.615316341089,211.145523529378,229.434797290397,220.194746853957,292.31047784507,239.938578633976,299.625899080265,257.813166983609,300.475551642171,344.602517541034,283.330207188021,236.413829758497,217.788460015601,301.044757330741,219.30203672776,269.6462789494,193.928321966011,228.816375624954,234.690248288502,211.22539063413,266.370834151449,200.792523645675,238.659608176773,199.318220683897,163.122228336609,229.90023054618,203.077538674293,249.664275111689,796.177979199358,607.542648825499,433.73608880279,434.876312176258,316.605763455926,287.28584383749,289.181243644455,144.665841288106,277.016216647473,326.797228976286,289.744469950615,295.126465471402,293.871451114678,253.636571586794,341.660232213611,317.974373407507,303.58101346293,230.708705190857,224.407274714273,419.166431032719,273.975865632715,259.168063189853,203.100061660143,314.643704456856,279.951613749359,272.911550406785,300.617326952627,245.02581291131,267.731711722277,213.030765473818,208.194468976677,170.027775769469,211.891403235748,209.365152793819,209.710797144333,261.808830721525,408.256006018373,321.076878477325,264.059607893345,306.437628640357,310.174903834998,357.137385311425,321.265568339219,353.335894200852,253.828186161261,221.607123953349,213.294507665291,157.657985762199,207.230389189445,202.385729385661,332.87111543129,307.991426639457,256.135450315981,298.43541107482,288.718268169381,279.162053280952,219.120847036803,262.866121014294,280.464409489861,290.539215023914,306.803941845821,327.452021979184,220.644355522842,207.182537002259,258.240769904927,260.942193426057,297.191449258548,236.012606173436,243.827694389741,257.829602854269,257.674566904084,214.362063014989,70.4616173355238,206.183316994647,240.907562105534,208.451673904819,238.041554669458,235.017970557672,228.963972597866,161.19302843681,159.38620352708,90.5940453097523,79.7843117334287,253.756929864427,304.290548150536,316.041615196173,264.258953936835,199.793792364909,183.581571817889,180.894151527553,187.122630930189,192.139154251325,176.266343793015,178.563173877345,199.886113397232,171.930561011269,192.846888599589,160.52511159957,724.118179906199,759.876365482259,700.918273320028,245.737163608946,311.740591724413,318.500674600774,287.039259586869,239.751465728904,378.383734553435,332.815145994689,375.819456816244,307.617196395201,330.20977452945,340.682647722755,285.534517598054,288.205570063501,314.933974244022,351.559251679486,279.706901739356,217.069531130161,249.783265218298,212.961484151826,340.831002433099,331.469845735375,243.804660398372,225.40235261935,279.520631554471,256.740367152018,244.861003693972,211.072876011019,195.523467597114,197.581620321427,190.283708649947,183.849364835266,184.371962578265,169.567204787597,194.916631079964,209.022466590844,273.609663403562,228.766314139386,213.6388261928,248.542372441282,224.450872290564,234.551693075727,212.745232451034,233.605903756804,198.681418556496,274.959713112292,217.457988221611,200.752135081398,190.701666117075,183.290283122998,220.685162962426,269.545613595044,256.856906073058,241.729935804336,245.805506708464,252.797766310965,227.926082414874
|phase1_expression=329.426178494561,485.424792026351,490.48918006192,627.915702672979,564.008591919587,329.211252219216,364.43571932902,258.504893530036,185.700324518048,198.252653794728,187.312457238702,192.490219655747,263.649124094057,253.256905807835,274.14933397429,242.160419798232,228.756734147904,370.983506461288,352.109865499537,395.106765823966,157.585216649932,346.823292544692,383.702490245096,368.782534538802,384.948773630711,488.097169497767,480.299625717368,392.804057186376,464.987307409747,381.321586326775,423.283544840977,177.808588568697,152.536067320973,253.570689624702,361.064524689093,315.845826181135,364.646470284591,493.867324269551,596.15886787166,503.629841702794,388.232782100469,432.367791978696,472.887083852344,456.250068343492,400.94576297318,333.687995429937,816.816563499353,426.893256192914,423.994332677531,447.188767870852,484.213032402129,540.509642012293,368.450602902789,229.939799017596,256.775662544842,415.216729762018,483.668446616621,396.036166869076,295.988982237592,449.113341401956,416.42723210356,602.465578018917,717.660900461689,1334.55128072831,1765.12645718205,1608.52698023797,718.441065023135,679.68218211383,223.451114524769,268.796823218396,267.533350838958,401.339633087344,429.147575068985,279.524003808525,256.578325915819,325.403450459947,356.775454438019,251.416368689735,288.473069455225,359.258247777048,344.816928737482,323.487203115748,345.62855276371,352.852156489863,276.259231980473,337.938987538297,303.536423463687,317.251856794662,331.52927441268,351.256611376339,361.750881899694,324.379801621983,280.828160821301,241.247326662104,161.144551527022,185.0351043712,186.229301094703,301.150379995428,388.120290876686,384.786796641761,267.884184415246,248.953366183777,142.690934235722,85.3280043783997,282.087826437612,284.523128928536,251.245649172347,241.72727336525,235.115598351632,200.100003459384,278.79092011318,336.738819013228,262.671051374651,271.300752994721,225.29996287201,179.577559010106,330.005281925389,131.4408154402,222.921859091368,230.194227475163,171.152176806805,205.102232076199,311.274241234264,167.177835093593,192.481523561565,315.48946318261,474.467893043444,437.928993625188,481.342020152769,264.230687910107,276.33036410245,245.528604028537,273.251831342259,310.949996113682,254.540354585461,256.503436910125,286.270451783239,274.441777165865,417.750719690864,190.028995865486,262.583053898736,267.606049560562,225.977972905713,215.357184687237,192.271146601653,192.939262748984,190.589307754488,229.211186474768,221.388328742029,185.702170724799,199.17667255359,252.513483756566,254.135185792196,206.513534747645,234.797417641463,268.497225938147,591.263503717744,375.727944387484,328.777168800701,181.4421767411,235.229638161039,214.63397726153,175.191104333056,192.435418648961,185.429069690629,165.09910077279,140.5752623334,173.163002730512,124.242686684678,149.556559776056,126.629480510627,135.673588330708,158.515183240139,163.731830887654,267.909394470698,248.617543508351,381.633694346287,273.177435363441,244.215046862843,236.649168625787,219.590154092847,252.306089303802,312.885907689733,376.646739702867,316.036354988645,428.7113791466,383.537528629211,390.551554616779,356.589315340871,286.723391360697,338.472186103771,342.323848724257,325.849453837394,231.81023208514,224.28839398943,258.229883707858,259.314475343116,246.036456175238,233.722241211255,234.257304843629,266.426841146813,307.752526820971,292.302290307929,207.221621299389,227.615316341089,211.145523529378,229.434797290397,220.194746853957,292.31047784507,239.938578633976,299.625899080265,257.813166983609,300.475551642171,344.602517541034,283.330207188021,236.413829758497,217.788460015601,301.044757330741,219.30203672776,269.6462789494,193.928321966011,228.816375624954,234.690248288502,211.22539063413,266.370834151449,200.792523645675,238.659608176773,199.318220683897,163.122228336609,229.90023054618,203.077538674293,249.664275111689,796.177979199358,607.542648825499,433.73608880279,434.876312176258,316.605763455926,287.28584383749,289.181243644455,144.665841288106,277.016216647473,326.797228976286,289.744469950615,295.126465471402,293.871451114678,253.636571586794,341.660232213611,317.974373407507,303.58101346293,230.708705190857,224.407274714273,419.166431032719,273.975865632715,259.168063189853,203.100061660143,314.643704456856,279.951613749359,272.911550406785,300.617326952627,245.02581291131,267.731711722277,213.030765473818,208.194468976677,170.027775769469,211.891403235748,209.365152793819,209.710797144333,261.808830721525,408.256006018373,321.076878477325,264.059607893345,306.437628640357,310.174903834998,357.137385311425,321.265568339219,353.335894200852,253.828186161261,221.607123953349,213.294507665291,157.657985762199,207.230389189445,202.385729385661,332.87111543129,307.991426639457,256.135450315981,298.43541107482,288.718268169381,279.162053280952,219.120847036803,262.866121014294,280.464409489861,290.539215023914,306.803941845821,327.452021979184,220.644355522842,207.182537002259,258.240769904927,260.942193426057,297.191449258548,236.012606173436,243.827694389741,257.829602854269,257.674566904084,214.362063014989,70.4616173355238,206.183316994647,240.907562105534,208.451673904819,238.041554669458,235.017970557672,228.963972597866,161.19302843681,159.38620352708,90.5940453097523,79.7843117334287,253.756929864427,304.290548150536,316.041615196173,264.258953936835,199.793792364909,183.581571817889,180.894151527553,187.122630930189,192.139154251325,176.266343793015,178.563173877345,199.886113397232,171.930561011269,192.846888599589,160.52511159957,724.118179906199,759.876365482259,700.918273320028,245.737163608946,311.740591724413,318.500674600774,287.039259586869,239.751465728904,378.383734553435,332.815145994689,375.819456816244,307.617196395201,330.20977452945,340.682647722755,285.534517598054,288.205570063501,314.933974244022,351.559251679486,279.706901739356,217.069531130161,249.783265218298,212.961484151826,340.831002433099,331.469845735375,243.804660398372,225.40235261935,279.520631554471,256.740367152018,244.861003693972,211.072876011019,195.523467597114,197.581620321427,190.283708649947,183.849364835266,184.371962578265,169.567204787597,194.916631079964,209.022466590844,273.609663403562,228.766314139386,213.6388261928,248.542372441282,224.450872290564,234.551693075727,212.745232451034,233.605903756804,198.681418556496,274.959713112292,217.457988221611,200.752135081398,190.701666117075,183.290283122998,220.685162962426,269.545613595044,256.856906073058,241.729935804336,245.805506708464,252.797766310965,227.926082414874
|short_description=p1@Clta
}}
}}

Latest revision as of 00:31, 27 September 2015

Short description:p1@Clta
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Clta_5end
Coexpression cluster:MCL_coexpression_mm9:247
Association with transcript: 0bp_to_ENSMUST00000078664, ENSMUST00000107845, ENSMUST00000107849, ENSMUST00000107851_5end
EntrezGene:Clta
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Clta

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7329.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5485.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6490.49
CD326+ enterocyte, pool1.CNhs13542.11848-124I3627.92
CD326+ enterocyte, pool2.CNhs13197.11849-124I4564.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7329.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8364.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9258.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7185.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2198.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6187.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1192.49
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4263.65
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8253.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1274.15
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3242.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5228.76
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2370.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4352.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6395.11
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3157.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2346.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9383.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1368.78
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2384.95
GP2+ M cell, pool1.CNhs13228.11845-124H9488.10
GP2+ M cell, pool2.CNhs13231.11846-124I1480.30
GP2+ M cell, pool3.CNhs13240.11847-124I2392.80
Ileum epithelium, pool1.CNhs13199.10252-104B9464.99
Ileum epithelium, pool2.CNhs13232.10253-104C1381.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8423.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3177.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6152.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9253.57
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5361.06
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6315.85
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7364.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8493.87
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1596.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3503.63
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9388.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2432.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4472.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8456.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9400.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3333.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7816.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2426.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8423.99
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3447.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C4484.21
Mouse Astrocytes, donor3.CNhs12107.11633-122C4540.51
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2368.45
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9229.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1256.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1415.22
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1483.67
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5396.04
Mouse Granule cells, donor1.CNhs12131.11713-123C3295.99
Mouse Granule cells, donor2.CNhs12357.11731-123E3449.11
Mouse Granule cells, donor3.CNhs12108.11636-122C7416.43
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6602.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1717.66
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71334.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71765.13
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21608.53
Mouse Microglia, donor1.CNhs12629.11718-123C8718.44
Mouse Microglia, donor2.CNhs12634.11736-123E8679.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5223.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5268.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9267.53
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1401.34
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5429.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2279.52
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2256.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6325.40
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3356.78
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3251.42
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7288.47
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4359.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4344.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8323.49
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4345.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5352.85
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6276.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6337.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6303.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1317.25
Mouse Schwann, donor1.CNhs12507.11728-123D9331.53
Mouse Schwann, donor2.CNhs12573.11746-123F9351.26
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3361.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7324.38
Mouse hepatocyte, donor1.CNhs13078.11714-123C4280.83
Mouse hepatocyte, donor3.CNhs12615.11637-122C8241.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F4161.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F6185.04
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7186.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7301.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3388.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8384.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6267.88
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1248.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8142.69
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1282.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2284.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3251.25
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6241.73
accessory axillary lymph node, adult.CNhs10475.1063-29H9235.12
adrenal gland, adult.CNhs10508.49-24D7200.10
adrenal gland, embryo E14.CNhs11038.406-44C5278.79
adrenal gland, embryo E16.CNhs11004.1254-43D6336.74
adrenal gland, embryo E17.CNhs11043.1263-45I1262.67
adrenal gland, embryo E18.CNhs11026.1262-18F5271.30
adrenal gland, neonate N00.CNhs11191.1311-23C1225.30
adrenal gland, neonate N25.CNhs11223.1377-27I3179.58
amnion, adult pregnant day17.5.CNhs10488.583-22A8330.01
aorta, adult.CNhs10498.46-23H1131.44
bone (os femoris), adult.CNhs10483.56-12G2222.92
bone (os femoris), neonate N02.CNhs11227.1985-43F5230.19
bone (os femoris), neonate N16.CNhs11225.1525-43A6171.15
bone (os femoris), neonate N20.CNhs11195.1350-25C3205.10
cecum, adult.CNhs10467.37-13H4311.27
cerebellum, adult.CNhs10494.15-8B2167.18
cerebellum, neonate N30.CNhs11135.1395-42I2192.48
colon, adult.CNhs10468.36-18H7315.49
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7474.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1437.93
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4481.34
corpora quadrigemina, adult.CNhs10501.16-22A4264.23
corpus striatum, adult.CNhs10487.19-21D8276.33
corpus striatum, neonate N00.CNhs11226.630-43F1245.53
cortex, adult.CNhs10473.12-14D5273.25
cortex, neonate N30.CNhs11107.1392-42F2310.95
diencephalon, adult.CNhs10482.20-12F2254.54
diencephalon, neonate N30.CNhs11201.1388-42B2256.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1286.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2274.44
epididymis, adult.CNhs10490.58-23B2417.75
eyeball, adult.CNhs10484.31-12G4190.03
eyeball, embryo E12.CNhs11016.345-16C6262.58
eyeball, embryo E14.CNhs10521.399-16E2267.61
eyeball, embryo E15.CNhs10593.426-16C9225.98
eyeball, embryo E17.CNhs11023.1261-18D4215.36
eyeball, neonate N00.CNhs11207.633-15C6192.27
eyeball, neonate N01.CNhs11140.1532-43E7192.94
eyeball, neonate N02.CNhs11205.1551-44G8190.59
eyeball, neonate N16.CNhs11188.777-19A2229.21
forelimb, embryo E11.CNhs10596.335-25E2221.39
forelimb, embryo E12.CNhs10600.359-14H2185.70
forelimb, embryo E13.CNhs10589.384-1E2199.18
forelimb, embryo E14.CNhs10577.413-26A8252.51
forelimb, embryo E15.CNhs11007.437-20E7254.14
forelimb, embryo E17.CNhs10598.1517-43C4206.51
forelimb, embryo E18.CNhs11008.1520-43B5234.80
gonad, embryo E13.CNhs11044.1564-45I6268.50
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8591.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2375.73
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5328.78
heart, embryo E11.CNhs10586.331-24E9181.44
heart, embryo E12.CNhs11015.353-12F5235.23
heart, embryo E13.CNhs11013.376-3I9214.63
heart, embryo E14.CNhs10597.403-26D4175.19
heart, embryo E15.CNhs11017.431-16C8192.44
heart, embryo E16.CNhs11021.457-17C6185.43
heart, embryo E17.CNhs11025.479-18E5165.10
heart, embryo E18.CNhs11030.1283-20G3140.58
heart, neonate N00.CNhs11213.639-21E3173.16
heart, neonate N03.CNhs11221.1349-25I2124.24
heart, neonate N10.CNhs11118.749-24G1149.56
heart, neonate N16.CNhs11209.782-15G1126.63
heart, neonate N20.CNhs11127.821-26I6135.67
heart, neonate N25.CNhs11196.1351-25D3158.52
heart, neonate N30.CNhs11202.1390-42D2163.73
hippocampus, adult.CNhs10478.13-16E8267.91
hippocampus, neonate N00.CNhs11228.627-43G1248.62
intestinal mucosa, adult.CNhs10506.860-29I3381.63
intestine, adult.CNhs10496.178-9A3273.18
intestine, embryo E12.CNhs11019.1251-16I5244.22
intestine, embryo E13.CNhs11010.381-16D5236.65
intestine, embryo E15.CNhs10602.976-16D8219.59
intestine, embryo E16.CNhs10585.463-22H4252.31
intestine, embryo E17.CNhs10582.482-18D3312.89
intestine, embryo E18.CNhs10526.1289-20F7376.65
intestine, neonate N00.CNhs11126.644-26D1316.04
intestine, neonate N01.CNhs11192.1322-23E9428.71
intestine, neonate N06.CNhs11102.688-20B8383.54
intestine, neonate N07.CNhs11095.720-20F2390.55
intestine, neonate N10.CNhs11098.755-23A5356.59
intestine, neonate N20.CNhs11187.827-18D1286.72
intestine, neonate N25.CNhs11121.1352-25E3338.47
intestine, neonate N30.CNhs11131.1384-42G1342.32
kidney, embryo E14.CNhs10606.411-4I9325.85
kidney, embryo E15.CNhs10997.434-16F8231.81
kidney, embryo E16.CNhs10584.464-22A5224.29
kidney, embryo E17.CNhs11028.483-18I2258.23
kidney, embryo E18.CNhs11001.1288-20C7259.31
kidney, neonate N00.CNhs11214.646-21G7246.04
kidney, neonate N10.CNhs11206.758-6D5233.72
kidney, neonate N20.CNhs11113.832-19I1234.26
kidney, neonate N25.CNhs11122.1353-25F3266.43
kidney, neonate N30.CNhs11203.1385-42H1307.75
liver, adult pregnant day01.CNhs10466.508-5B2292.30
liver, embryo E12.CNhs10601.355-15F8207.22
liver, embryo E13.CNhs10524.378-3H6227.62
liver, embryo E14.CNhs10594.409-16E1211.15
liver, embryo E15.CNhs10520.433-16D7229.43
liver, embryo E16.CNhs10523.462-17F5220.19
liver, embryo E17.CNhs10510.481-18A3292.31
liver, embryo E18.CNhs10579.499-43G4239.94
liver, neonate N00.CNhs11117.641-24F4299.63
liver, neonate N03.CNhs11123.1345-25G2257.81
liver, neonate N06.CNhs11101.684-20A8300.48
liver, neonate N07.CNhs11103.716-20H2344.60
liver, neonate N10.CNhs11115.751-24B9283.33
liver, neonate N20.CNhs11220.823-25A3236.41
liver, neonate N25.CNhs11198.1368-26H1217.79
liver, neonate N30.CNhs11106.1382-42D1301.04
lung, adult.CNhs10474.28-22B1219.30
lung, embryo E12.CNhs10522.354-16G2269.65
lung, embryo E14.CNhs10604.404-26F8193.93
lung, embryo E15.CNhs11020.432-17C5228.82
lung, embryo E16.CNhs10998.458-17B6234.69
lung, embryo E17.CNhs10605.480-44A6211.23
lung, embryo E18.CNhs10583.1287-20I6266.37
lung, neonate N00.CNhs11224.640-42C6200.79
lung, neonate N06.CNhs11212.683-20E5238.66
lung, neonate N07.CNhs11111.715-19A3199.32
lung, neonate N10.CNhs11219.750-23E6163.12
lung, neonate N20.CNhs11109.822-18A4229.90
lung, neonate N25.CNhs11119.1359-25C7203.08
lung, neonate N30.CNhs11133.1394-42H2249.66
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1796.18
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1607.54
mammary gland, adult lactating day02.CNhs10480.595-22B6433.74
mammary gland, adult pregnant day19.CNhs10476.588-5H2434.88
medulla oblongata, adult.CNhs10477.17-12C2316.61
medulla oblongata, neonate N30.CNhs11200.1396-42A3287.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7289.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2144.67
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1277.02
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2326.80
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3289.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7295.13
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8293.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9253.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4341.66
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5317.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6303.58
olfactory brain, adult.CNhs10489.18-22I9230.71
ovary, adult.CNhs10507.91-2I7224.41
ovary, embryo E18.CNhs11040.505-44H7419.17
ovary, neonate N00.CNhs11217.1299-22I4273.98
oviduct, adult pregnant day01.CNhs10500.988-6G6259.17
pancreas, adult.CNhs10486.34-16E4203.10
pancreas, embryo E14.CNhs11012.405-44F4314.64
pancreas, embryo E15.CNhs11042.1556-45F2279.95
pancreas, embryo E16.CNhs11003.460-26E5272.91
pancreas, embryo E17.CNhs10599.1558-45G3300.62
pancreas, embryo E18.CNhs10580.1535-43I7245.03
pancreas, neonate N00.CNhs11105.645-26G9267.73
pancreas, neonate N01.CNhs11138.1531-43D7213.03
pancreas, neonate N02.CNhs11139.1539-43D8208.19
pancreas, neonate N16.CNhs11136.787-43B6170.03
pancreas, neonate N25.CNhs11094.1555-45E2211.89
pancreas, neonate N30.CNhs11182.1548-44H5209.37
pituitary gland, adult.CNhs10493.21-1G8209.71
pituitary gland, embryo E12.CNhs11018.346-16E6261.81
pituitary gland, embryo E13.CNhs11009.370-44C7408.26
pituitary gland, embryo E14.CNhs11037.398-44A5321.08
pituitary gland, embryo E15.CNhs10592.427-16B9264.06
pituitary gland, embryo E16.CNhs11036.449-43F6306.44
pituitary gland, embryo E17.CNhs11039.1265-44F5310.17
pituitary gland, neonate N00.CNhs11190.1308-22E9357.14
placenta, adult pregnant day10.CNhs10472.539-13I7321.27
placenta, adult pregnant day17.CNhs10464.577-18G3353.34
prostate, adult.CNhs10470.859-1F8253.83
skin, adult.CNhs10492.30-1C3221.61
skin, neonate N00.CNhs11124.650-25G4213.29
skin, neonate N03.CNhs11215.662-22H3157.66
skin, neonate N06.CNhs11097.693-20I5207.23
skin, neonate N10.CNhs11108.762-6C4202.39
small intestine, neonate N16.CNhs11114.790-21I1332.87
spinal cord, adult.CNhs10505.24-13C9307.99
spleen, adult.CNhs10465.25-2G2256.14
spleen, embryo E16.CNhs11035.461-43C1298.44
spleen, embryo E18.CNhs11011.1271-21F2288.72
spleen, neonate N10.CNhs11116.752-24D1279.16
spleen, neonate N20.CNhs11112.824-19H1219.12
spleen, neonate N25.CNhs11099.1354-25G3262.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6280.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9290.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3306.80
stomach, adult.CNhs10503.33-1H6327.45
stomach, embryo E12.CNhs10588.356-43E3220.64
stomach, embryo E15.CNhs10603.1252-16G8207.18
stomach, embryo E16.CNhs11022.459-17D4258.24
stomach, embryo E17.CNhs11006.1035-18D5260.94
stomach, embryo E18.CNhs10999.1286-20C6297.19
stomach, neonate N03.CNhs11193.1340-24B8236.01
stomach, neonate N07.CNhs11210.718-18A9243.83
stomach, neonate N25.CNhs11104.1355-25E4257.83
stomach, neonate N30.CNhs11134.1386-42I1257.67
submandibular gland, adult.CNhs10469.59-29C1214.36
testis, adult.CNhs10504.57-7G570.46
testis, embryo E13.CNhs11031.389-23F5206.18
testis, embryo E15.CNhs11034.443-27C5240.91
testis, embryo E16.CNhs11033.470-26G5208.45
testis, embryo E17.CNhs11029.486-18I5238.04
testis, embryo E18.CNhs11027.503-18G5235.02
testis, neonate N00.CNhs11189.1300-22B7228.96
testis, neonate N07.CNhs11222.726-26I4161.19
testis, neonate N10.CNhs11204.763-44D9159.39
testis, neonate N20.CNhs11110.839-18H390.59
testis, neonate N30.CNhs11130.1391-42E279.78
thymus, adult.CNhs10471.38-12B5253.76
thymus, embryo E14.CNhs11041.402-44I4304.29
thymus, embryo E15.CNhs11005.430-45I2316.04
thymus, embryo E16.CNhs11002.456-26C5264.26
thymus, embryo E17.CNhs10581.478-18C1199.79
thymus, embryo E18.CNhs10595.1273-19G4183.58
thymus, neonate N02.CNhs11181.1541-43F8180.89
thymus, neonate N03.CNhs11137.2104-43C7187.12
thymus, neonate N06.CNhs11197.681-26C4192.14
thymus, neonate N07.CNhs11211.713-19D3176.27
thymus, neonate N10.CNhs11194.748-24E4178.56
thymus, neonate N20.CNhs11186.820-7A2199.89
thymus, neonate N25.CNhs11125.1362-25G7171.93
thymus, neonate N30.CNhs11132.1393-42G2192.85
tongue, adult.CNhs10499.32-1B4160.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3724.12
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7759.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5700.92
urinary bladder, adult.CNhs10481.879-12E4245.74
uterus, adult pregnant day19.CNhs10497.590-15F5311.74
uterus, adult.CNhs10509.92-27E5318.50
vagina, adult.CNhs10502.89-27D5287.04
vesicular gland, adult.CNhs10491.51-27F8239.75
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1378.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2332.82
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3375.82
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7307.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4330.21
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5340.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6285.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7288.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8314.93
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9351.56
whole body, embryo E11.CNhs11014.324-5I8279.71
whole body, embryo E12.CNhs10587.857-27C9217.07
whole body, embryo E13.CNhs10512.372-23H2249.78
whole body, embryo E14.5.CNhs10578.420-27D2212.96
whole body, embryo E14.CNhs10519.395-14B1340.83
whole body, embryo E16.CNhs10514.453-14F2331.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5243.80
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5225.40
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5279.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5256.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5244.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5211.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5195.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5197.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5190.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5183.85
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5184.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5169.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5194.92
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5209.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5273.61
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5228.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5213.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5248.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5224.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5234.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5212.75
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5233.61
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5198.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5274.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5217.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5200.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5190.70
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5183.29
whole body, embryo E17.5.CNhs10513.490-9F9220.69
whole body, embryo E17.CNhs10517.475-3I5269.55
whole body, embryo E18.CNhs10516.493-3B3256.86
whole body, neonate N00.CNhs10525.657-19C2241.73
whole body, neonate N01.CNhs10576.659-23C6245.81
whole body, neonate N06.CNhs10515.692-21D1252.80
whole body, neonate N10.CNhs10518.761-6B4227.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell8.18e-1497
somatic stem cell5.99e-1291
multi fate stem cell5.99e-1291
embryonic cell1.05e-1070
neural cell1.44e-0843
ectodermal cell1.82e-0844
neurectodermal cell1.82e-0844

Uber anatomy
Ontology termp-valuen
nervous system1.00e-0875
central nervous system2.91e-0873
intestine3.36e-0731
mucosa4.04e-0715
musculoskeletal system9.75e-0732
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