FFCP PHASE1:Mm9::chr1:193801274..193801281,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74023 | |EntrezGene=74023 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=982 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BRE0 | |UniProt=Q8BRE0 | ||
|association_with_transcript=4bp_to_ENSMUST00000053463_5end | |association_with_transcript=4bp_to_ENSMUST00000053463_5end | ||
|cluster_id=chr1:193801274..193801281,+ | |||
|description=CAGE_peak_5_at_Rd3_5end | |description=CAGE_peak_5_at_Rd3_5end | ||
|id=chr1:193801274..193801281,+ | |id=chr1:193801274..193801281,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,1.29e-08,2;CL:0000129,1.29e-08,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!6.21e-07!9;UBERON:0000019!6.21e-07!9;UBERON:0000047!6.21e-07!9;UBERON:0004088!6.21e-07!9;UBERON:0002104!6.21e-07!9;UBERON:0001456!6.21e-07!9;UBERON:0003072!6.21e-07!9;UBERON:0003071!6.21e-07!9;UBERON:0004128!6.21e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.71e-10,14;UBERON:0003135,1.97e-09,15;UBERON:0003101,6.93e-09,16;UBERON:0000079,6.93e-09,16;UBERON:0004176,2.10e-08,17;UBERON:0009196,2.10e-08,17;UBERON:0009117,2.10e-08,17;UBERON:0000991,5.65e-08,18;UBERON:0005564,5.65e-08,18;UBERON:0000970,1.75e-07,9;UBERON:0000019,1.75e-07,9;UBERON:0000047,1.75e-07,9;UBERON:0010312,1.75e-07,9;UBERON:0004088,1.75e-07,9;UBERON:0002104,1.75e-07,9;UBERON:0001456,1.75e-07,9;UBERON:0003072,1.75e-07,9;UBERON:0004128,1.75e-07,9;UBERON:0003071,1.75e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,3.84218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,2.10441855886474,0,0,0,0,0.476255494059295,0.512454881139399,0.468508622798644,5.69147415625834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0.714130922658041,0,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,0,0,0,0,0,0,0,0,1.20792060413003,2.30424005006292,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,3.84218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,2.10441855886474,0,0,0,0,0.476255494059295,0.512454881139399,0.468508622798644,5.69147415625834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0.714130922658041,0,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,0,0,0,0,0,0,0,0,1.20792060413003,2.30424005006292,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p5@Rd3 | |short_description=p5@Rd3 | ||
}} | }} |
Latest revision as of 00:26, 27 September 2015
Short description: | p5@Rd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:982 |
Association with transcript: | 4bp_to_ENSMUST00000053463_5end |
EntrezGene: | Rd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 1.29e-08 | 2 |
microglial cell | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 4.71e-10 | 14 |
male reproductive organ | 1.97e-09 | 15 |
male organism | 6.93e-09 | 16 |
male reproductive system | 6.93e-09 | 16 |
external genitalia | 2.10e-08 | 17 |
indifferent external genitalia | 2.10e-08 | 17 |
indifferent gonad | 2.10e-08 | 17 |
gonad | 5.65e-08 | 18 |
gonad primordium | 5.65e-08 | 18 |
eye | 1.75e-07 | 9 |
camera-type eye | 1.75e-07 | 9 |
simple eye | 1.75e-07 | 9 |
immature eye | 1.75e-07 | 9 |
ocular region | 1.75e-07 | 9 |
visual system | 1.75e-07 | 9 |
face | 1.75e-07 | 9 |
optic cup | 1.75e-07 | 9 |
optic vesicle | 1.75e-07 | 9 |
eye primordium | 1.75e-07 | 9 |