FFCP PHASE1:Mm9::chr9:65208830..65208854,+: Difference between revisions
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{{FFCP|EntrezGene=208080|HGNC=|MCL_coexpression_id=16|UniProt=G3UW59|association_with_transcript=-12bp_to_ENSMUST00000147185,NM_001111145,uc012gvj.1_5end|description=CAGE_peak_1_at_Gm514_5end|id=chr9:65208830..65208854,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!7.06e-14!9;UBERON:0000019!7.06e-14!9;UBERON:0000047!7.06e-14!9;UBERON:0004088!7.06e-14!9;UBERON:0002104!7.06e-14!9;UBERON:0001456!7.06e-14!9;UBERON:0003072!7.06e-14!9;UBERON:0003071!7.06e-14!9;UBERON:0004128!7.06e-14!9;UBERON:0000020!5.84e-12!12;UBERON:0001032!5.84e-12!12;UBERON:0004456!5.84e-12!12;UBERON:0001444!7.36e-11!11;UBERON:0005085!8.36e-11!13;UBERON:0002048!3.08e-07!14;UBERON:0000117!3.08e-07!14;UBERON:0000171!3.08e-07!14;UBERON:0000170!3.08e-07!14;UBERON:0005597!3.08e-07!14;UBERON:0000118!3.08e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.98e-61,9;UBERON:0000019,4.98e-61,9;UBERON:0000047,4.98e-61,9;UBERON:0010312,4.98e-61,9;UBERON:0004088,4.98e-61,9;UBERON:0002104,4.98e-61,9;UBERON:0001456,4.98e-61,9;UBERON:0003072,4.98e-61,9;UBERON:0004128,4.98e-61,9;UBERON:0003071,4.98e-61,9;UBERON:0001444,7.79e-50,11;UBERON:0000020,1.24e-45,12;UBERON:0001032,1.24e-45,12;UBERON:0004456,1.24e-45,12;UBERON:0000033,4.44e-42,13;UBERON:0005085,4.44e-42,13;UBERON:0007811,9.95e-15,36;UBERON:0003056,4.64e-13,49;UBERON:0000153,3.42e-12,43;UBERON:0002346,9.29e-10,64;UBERON:0003075,9.29e-10,64;UBERON:0007284,9.29e-10,64;UBERON:0010371,2.01e-08,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,43.5614641685001,2.47228841629137,1.83921683546778,7.38254732201932,14.4676625122286,41.706373979764,52.7828527573581,51.6296502324106,144.61518424311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.729619285912702,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0.788175720530955,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,2.10837217149998,0,0.680879211507576,0.18006109403131,0.388076051348264,0.428674070063185,1.24138163549592,0,0.822745103010605,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.962757628775446,0,0.25347929989024,0.188626341386076,0.37456602987953,0,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0.789209134313529,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p1@Gm514}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208080 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=G3UW59 | |||
|association_with_transcript=-12bp_to_ENSMUST00000147185,NM_001111145,uc012gvj.1_5end | |||
|cluster_id=chr9:65208830..65208854,+ | |||
|description=CAGE_peak_1_at_Gm514_5end | |||
|id=chr9:65208830..65208854,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!7.06e-14!9;UBERON:0000019!7.06e-14!9;UBERON:0000047!7.06e-14!9;UBERON:0004088!7.06e-14!9;UBERON:0002104!7.06e-14!9;UBERON:0001456!7.06e-14!9;UBERON:0003072!7.06e-14!9;UBERON:0003071!7.06e-14!9;UBERON:0004128!7.06e-14!9;UBERON:0000020!5.84e-12!12;UBERON:0001032!5.84e-12!12;UBERON:0004456!5.84e-12!12;UBERON:0001444!7.36e-11!11;UBERON:0005085!8.36e-11!13;UBERON:0002048!3.08e-07!14;UBERON:0000117!3.08e-07!14;UBERON:0000171!3.08e-07!14;UBERON:0000170!3.08e-07!14;UBERON:0005597!3.08e-07!14;UBERON:0000118!3.08e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.98e-61,9;UBERON:0000019,4.98e-61,9;UBERON:0000047,4.98e-61,9;UBERON:0010312,4.98e-61,9;UBERON:0004088,4.98e-61,9;UBERON:0002104,4.98e-61,9;UBERON:0001456,4.98e-61,9;UBERON:0003072,4.98e-61,9;UBERON:0004128,4.98e-61,9;UBERON:0003071,4.98e-61,9;UBERON:0001444,7.79e-50,11;UBERON:0000020,1.24e-45,12;UBERON:0001032,1.24e-45,12;UBERON:0004456,1.24e-45,12;UBERON:0000033,4.44e-42,13;UBERON:0005085,4.44e-42,13;UBERON:0007811,9.95e-15,36;UBERON:0003056,4.64e-13,49;UBERON:0000153,3.42e-12,43;UBERON:0002346,9.29e-10,64;UBERON:0003075,9.29e-10,64;UBERON:0007284,9.29e-10,64;UBERON:0010371,2.01e-08,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,43.5614641685001,2.47228841629137,1.83921683546778,7.38254732201932,14.4676625122286,41.706373979764,52.7828527573581,51.6296502324106,144.61518424311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.729619285912702,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0.788175720530955,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,2.10837217149998,0,0.680879211507576,0.18006109403131,0.388076051348264,0.428674070063185,1.24138163549592,0,0.822745103010605,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.962757628775446,0,0.25347929989024,0.188626341386076,0.37456602987953,0,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0.789209134313529,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p1@Gm514 | |||
}} |
Latest revision as of 00:17, 27 September 2015
Short description: | p1@Gm514 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm514_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -12bp_to_ENSMUST00000147185, NM_001111145, uc012gvj.1_5end |
EntrezGene: | Gm514 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.98e-61 | 9 |
camera-type eye | 4.98e-61 | 9 |
simple eye | 4.98e-61 | 9 |
immature eye | 4.98e-61 | 9 |
ocular region | 4.98e-61 | 9 |
visual system | 4.98e-61 | 9 |
face | 4.98e-61 | 9 |
optic cup | 4.98e-61 | 9 |
optic vesicle | 4.98e-61 | 9 |
eye primordium | 4.98e-61 | 9 |
subdivision of head | 7.79e-50 | 11 |
sense organ | 1.24e-45 | 12 |
sensory system | 1.24e-45 | 12 |
entire sense organ system | 1.24e-45 | 12 |
head | 4.44e-42 | 13 |
ectodermal placode | 4.44e-42 | 13 |
craniocervical region | 9.95e-15 | 36 |
pre-chordal neural plate | 4.64e-13 | 49 |
anterior region of body | 3.42e-12 | 43 |
neurectoderm | 9.29e-10 | 64 |
neural plate | 9.29e-10 | 64 |
presumptive neural plate | 9.29e-10 | 64 |
ecto-epithelium | 2.01e-08 | 73 |