FFCP PHASE1:Mm9::chr4:41702405..41702438,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14430 | |EntrezGene=14430 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3475 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-192bp_to_ENSMUST00000132760_5end | |association_with_transcript=-192bp_to_ENSMUST00000132760_5end | ||
|cluster_id=chr4:41702405..41702438,+ | |||
|description=CAGE_peak_1_at_Galt_5end | |description=CAGE_peak_1_at_Galt_5end | ||
|id=chr4:41702405..41702438,+ | |id=chr4:41702405..41702438,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.15e-12!43;UBERON:0009854!3.64e-11!23;UBERON:0009856!3.64e-11!23;UBERON:0002107!1.15e-10!22;UBERON:0007499!1.15e-10!22;UBERON:0006925!1.15e-10!22;UBERON:0009497!1.15e-10!22;UBERON:0000015!1.15e-10!22;UBERON:0002423!1.15e-10!22;UBERON:0006235!1.15e-10!22;UBERON:0008835!1.15e-10!22;UBERON:0003894!1.15e-10!22;UBERON:0004161!1.15e-10!22;UBERON:0008836!1.15e-10!22;UBERON:0004119!2.62e-08!130;UBERON:0000925!2.62e-08!130;UBERON:0006595!2.62e-08!130;UBERON:0001007!5.35e-08!128;UBERON:0001555!5.35e-08!128;UBERON:0007026!5.35e-08!128;UBERON:0002365!6.02e-08!25;UBERON:0002330!6.02e-08!25;UBERON:0005409!7.19e-08!59;UBERON:0003929!1.14e-07!55;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.42e-13,31;UBERON:0009854,3.64e-11,23;UBERON:0009856,3.64e-11,23;UBERON:0002107,1.15e-10,22;UBERON:0007499,1.15e-10,22;UBERON:0006925,1.15e-10,22;UBERON:0009497,1.15e-10,22;UBERON:0000015,1.15e-10,22;UBERON:0002423,1.15e-10,22;UBERON:0006235,1.15e-10,22;UBERON:0008835,1.15e-10,22;UBERON:0003894,1.15e-10,22;UBERON:0004161,1.15e-10,22;UBERON:0008836,1.15e-10,22;UBERON:0002365,6.20e-08,25;UBERON:0002330,6.20e-08,25;UBERON:0005409,1.09e-07,47;UBERON:0003929,1.09e-07,55;UBERON:0004119,1.25e-07,118;UBERON:0000925,1.25e-07,118;UBERON:0006595,1.25e-07,118;UBERON:0001007,2.46e-07,116;UBERON:0001555,2.46e-07,116;UBERON:0007026,2.46e-07,116;UBERON:0004921,7.13e-07,114 | |||
|phase1_expression=4.48416771893423,23.3813523118372,23.6599604482559,40.5302043151152,53.5958431042592,10.2406355866253,12.6150825921584,15.236552166106,30.832730151215,24.3427107374873,6.33506482434368,6.06268408364557,13.5248576645653,12.5885379483356,1.99865857089398,2.83465374345756,1.39912375625629,9.46386496074713,8.08975158273859,6.79023442876848,6.29320347117916,4.96454756004426,3.6567970479451,11.8394392867121,12.15869189656,20.6723507081407,16.3689558540448,16.3758136841276,18.0522248483555,15.6258680451157,14.4124831925948,3.17515336729816,3.69038872550742,0,10.9763615505484,6.31691652362271,11.4334839506927,12.5559489221072,6.2506827561904,8.37637990358077,9.99993529652724,7.5135003345429,7.2826552954673,1.38486499773135,1.01376931219515,0.367093504323363,10.1710874765245,3.05235218932625,5.05278220289285,2.72201858703997,4.75953833526233,0,15.6037823633695,26.1130371124084,26.5514101322547,3.08711323243136,2.57880095944881,2.57836046138721,6.47412674750713,7.40587370980846,5.70448263155561,5.42151251310611,3.55717918444456,23.8473425079571,17.7995945262055,24.1563239081674,10.7856039786626,10.7581125490035,1.45165457231869,1.75507719831198,2.52389953621658,6.56997264128748,6.18431914664518,1.83736198822431,3.45043695665651,5.51531271966013,4.40463523997555,3.19218345212969,2.91852413186863,9.36392642884376,6.67859798297591,5.2091337055676,2.79182999001381,3.93933827022176,4.5839474333043,5.30331453852602,4.6982654663704,8.20157561631323,1.51452386666368,1.73814588245607,18.8411917656091,28.3939879403858,9.51959867190851,30.2233787317178,42.2354671340985,25.5375325645481,12.2186645514624,1.02258193546835,1.55871602761721,0,3.94361575374705,0,0,0,7.79367747640371,6.33399663687746,7.58286667522175,11.6467557313441,6.99132285847364,3.71105347662062,2.60227990149204,3.34912026143355,6.22661842591358,4.06951129492081,4.11560474974967,3.51866455723091,12.3597483867187,4.62717942143717,0.884610551949874,1.45590164952668,4.63767188766826,1.93950101254089,22.3670113461747,7.61230072230023,6.28340120440365,15.3274233125155,3.23500836165985,5.99902730993408,4.82866862877646,4.19413790333504,5.94750783664214,6.15706325353036,4.51943232499919,10.9957646652042,3.74018480207208,8.76102820565891,2.85150218780886,2.48813941220186,1.26361379216837,3.99839526184301,6.11566081924707,2.5289231487682,1.44049703844279,3.61691562805716,3.6739709541717,1.7935920839879,2.62364828767241,7.50239775143145,6.68260778091811,5.8622884852024,4.22282697993477,3.28793598641362,3.89266148915837,4.179025998266,4.11564272815887,5.17489093728082,5.61770549850588,3.86021860672073,4.26245249093389,8.07790512888457,11.7263029990548,7.74266864282364,8.99629995223799,10.0349758191176,8.33042409591843,9.76642567951713,4.29237442239391,7.70651259623319,6.08871444679878,3.77585167381919,4.86412857275134,5.99419948443863,5.04965265169416,6.1734952629771,4.83666881697493,1.44066457330998,17.5121954981413,14.8092317331585,5.54549451391608,6.0381534683714,9.79392706047909,33.2777815628515,41.8070722428356,42.6105402492133,24.6755112003146,36.8925658581784,37.4489461112402,41.7808591286417,36.6532483783946,26.0657628509724,18.8040103390984,18.7192796859105,7.39704813717019,6.62641373136427,13.5249282807697,12.0154283428735,13.9645790760691,11.6425461017929,11.1928670709935,19.0417090893687,16.0138702398202,19.6201490635663,22.2339470315362,4.17112764290235,7.66580080941492,10.793381394473,13.1859078902527,27.7353733715279,26.9903402888305,49.4837356415394,33.7241271692074,32.1236853430055,15.814502718009,30.8876986564858,30.8917296383415,29.5517287198121,35.8794827043824,42.4550298799763,4.24932337383191,3.41084541186873,3.09633455239849,2.8856664581782,3.98973422090454,8.20780661464897,8.33152743101048,4.09780660501378,2.36452716159286,1.32878813789265,2.23236676120482,2.45794972073607,2.93564469172023,3.32692834737477,3.01582567878545,4.89515115436839,5.90117127622843,1.65562047782839,3.37156238974363,3.16471553798949,1.14754461763673,2.52470927204373,3.47059041357882,6.63745865304285,5.60100834105277,6.21318874676635,2.89638276307112,2.54768877709949,8.50102473517278,7.59865230569411,6.32460444714438,3.53453448063988,2.55492153374884,3.02711526234334,1.46598263418218,2.63952196756057,10.619611067197,11.4106898992841,8.76738315197778,9.43025398779491,13.8791889653963,8.60818414242997,17.3146956422708,8.72480950746013,7.12994756769443,3.47640433729398,2.10837217149998,4.12542172992747,4.76615448055303,5.221771726908,5.17434735131018,3.21505552547388,2.83744373827638,4.8159580752559,3.29098041204242,5.17590413494819,10.0908834467395,9.10877904714427,2.20528398054962,7.91454014119104,10.333723308538,4.52346936961169,6.68485126417564,8.37118588699812,23.0269860937582,2.78137953015765,4.10090113914846,2.27025554759545,1.66675074632741,1.31857919903284,2.1871076435364,1.37266903923914,4.24946074984638,5.318155188299,5.94259887359022,13.3653886522116,6.01038387804157,5.89626454667861,6.37231510848627,5.85447228840512,9.82631536857799,5.25970950900801,9.25718704123762,7.0674104335688,11.0172727298024,0.621339313086926,0,5.83114529571517,4.46737924234164,2.13896307178452,2.32487682259916,1.85851738039856,3.16864544343536,2.3436789271911,3.56521771047417,0.966336483304024,1.44015003128933,9.16432249821717,3.24360344464263,2.77319584345034,2.98817892848929,6.44496104402933,6.95384741734427,3.24527713703916,4.28299628806274,6.76475214652589,7.54447385884498,7.36031151498936,7.69917257844044,7.31209996466504,8.06450625052826,3.40095575422817,5.10567692760349,11.4833736460129,10.9125000636651,3.86379188064381,2.25218970541418,2.93042598827624,1.71494703263253,3.00943262421218,14.1187960654267,5.52390283808612,13.7494923225455,10.998603669996,12.3314853558716,12.0863023582352,8.10027000278167,6.75481804836331,9.9691329976525,10.3552062350364,2.69847103718859,7.18244772121856,5.46347538413229,8.0225216632537,5.44994222832754,9.92754945630076,11.3345831178824,11.743998262617,9.30665707816264,12.3821633764261,14.7017993936339,9.24269072791773,8.80230170216895,9.53974770832552,9.13223956394251,11.9073422820768,9.03897742369873,6.55891349576597,8.24171801606613,8.97913412819824,8.9146005620208,9.9386451449229,8.82213902805088,7.84870649814574,7.15231291156513,7.36147088657586,10.0610385080025,7.3659519202596,8.82726739998101,8.97827634652382,10.5585166130515,10.2444661670586,10.2307760792422,10.5357052006457,10.6098636039628,3.49734809113124,13.1001700729429,12.6773921888496,4.3996316375834,2.8676884485537,1.15933917810211 | |phase1_expression=4.48416771893423,23.3813523118372,23.6599604482559,40.5302043151152,53.5958431042592,10.2406355866253,12.6150825921584,15.236552166106,30.832730151215,24.3427107374873,6.33506482434368,6.06268408364557,13.5248576645653,12.5885379483356,1.99865857089398,2.83465374345756,1.39912375625629,9.46386496074713,8.08975158273859,6.79023442876848,6.29320347117916,4.96454756004426,3.6567970479451,11.8394392867121,12.15869189656,20.6723507081407,16.3689558540448,16.3758136841276,18.0522248483555,15.6258680451157,14.4124831925948,3.17515336729816,3.69038872550742,0,10.9763615505484,6.31691652362271,11.4334839506927,12.5559489221072,6.2506827561904,8.37637990358077,9.99993529652724,7.5135003345429,7.2826552954673,1.38486499773135,1.01376931219515,0.367093504323363,10.1710874765245,3.05235218932625,5.05278220289285,2.72201858703997,4.75953833526233,0,15.6037823633695,26.1130371124084,26.5514101322547,3.08711323243136,2.57880095944881,2.57836046138721,6.47412674750713,7.40587370980846,5.70448263155561,5.42151251310611,3.55717918444456,23.8473425079571,17.7995945262055,24.1563239081674,10.7856039786626,10.7581125490035,1.45165457231869,1.75507719831198,2.52389953621658,6.56997264128748,6.18431914664518,1.83736198822431,3.45043695665651,5.51531271966013,4.40463523997555,3.19218345212969,2.91852413186863,9.36392642884376,6.67859798297591,5.2091337055676,2.79182999001381,3.93933827022176,4.5839474333043,5.30331453852602,4.6982654663704,8.20157561631323,1.51452386666368,1.73814588245607,18.8411917656091,28.3939879403858,9.51959867190851,30.2233787317178,42.2354671340985,25.5375325645481,12.2186645514624,1.02258193546835,1.55871602761721,0,3.94361575374705,0,0,0,7.79367747640371,6.33399663687746,7.58286667522175,11.6467557313441,6.99132285847364,3.71105347662062,2.60227990149204,3.34912026143355,6.22661842591358,4.06951129492081,4.11560474974967,3.51866455723091,12.3597483867187,4.62717942143717,0.884610551949874,1.45590164952668,4.63767188766826,1.93950101254089,22.3670113461747,7.61230072230023,6.28340120440365,15.3274233125155,3.23500836165985,5.99902730993408,4.82866862877646,4.19413790333504,5.94750783664214,6.15706325353036,4.51943232499919,10.9957646652042,3.74018480207208,8.76102820565891,2.85150218780886,2.48813941220186,1.26361379216837,3.99839526184301,6.11566081924707,2.5289231487682,1.44049703844279,3.61691562805716,3.6739709541717,1.7935920839879,2.62364828767241,7.50239775143145,6.68260778091811,5.8622884852024,4.22282697993477,3.28793598641362,3.89266148915837,4.179025998266,4.11564272815887,5.17489093728082,5.61770549850588,3.86021860672073,4.26245249093389,8.07790512888457,11.7263029990548,7.74266864282364,8.99629995223799,10.0349758191176,8.33042409591843,9.76642567951713,4.29237442239391,7.70651259623319,6.08871444679878,3.77585167381919,4.86412857275134,5.99419948443863,5.04965265169416,6.1734952629771,4.83666881697493,1.44066457330998,17.5121954981413,14.8092317331585,5.54549451391608,6.0381534683714,9.79392706047909,33.2777815628515,41.8070722428356,42.6105402492133,24.6755112003146,36.8925658581784,37.4489461112402,41.7808591286417,36.6532483783946,26.0657628509724,18.8040103390984,18.7192796859105,7.39704813717019,6.62641373136427,13.5249282807697,12.0154283428735,13.9645790760691,11.6425461017929,11.1928670709935,19.0417090893687,16.0138702398202,19.6201490635663,22.2339470315362,4.17112764290235,7.66580080941492,10.793381394473,13.1859078902527,27.7353733715279,26.9903402888305,49.4837356415394,33.7241271692074,32.1236853430055,15.814502718009,30.8876986564858,30.8917296383415,29.5517287198121,35.8794827043824,42.4550298799763,4.24932337383191,3.41084541186873,3.09633455239849,2.8856664581782,3.98973422090454,8.20780661464897,8.33152743101048,4.09780660501378,2.36452716159286,1.32878813789265,2.23236676120482,2.45794972073607,2.93564469172023,3.32692834737477,3.01582567878545,4.89515115436839,5.90117127622843,1.65562047782839,3.37156238974363,3.16471553798949,1.14754461763673,2.52470927204373,3.47059041357882,6.63745865304285,5.60100834105277,6.21318874676635,2.89638276307112,2.54768877709949,8.50102473517278,7.59865230569411,6.32460444714438,3.53453448063988,2.55492153374884,3.02711526234334,1.46598263418218,2.63952196756057,10.619611067197,11.4106898992841,8.76738315197778,9.43025398779491,13.8791889653963,8.60818414242997,17.3146956422708,8.72480950746013,7.12994756769443,3.47640433729398,2.10837217149998,4.12542172992747,4.76615448055303,5.221771726908,5.17434735131018,3.21505552547388,2.83744373827638,4.8159580752559,3.29098041204242,5.17590413494819,10.0908834467395,9.10877904714427,2.20528398054962,7.91454014119104,10.333723308538,4.52346936961169,6.68485126417564,8.37118588699812,23.0269860937582,2.78137953015765,4.10090113914846,2.27025554759545,1.66675074632741,1.31857919903284,2.1871076435364,1.37266903923914,4.24946074984638,5.318155188299,5.94259887359022,13.3653886522116,6.01038387804157,5.89626454667861,6.37231510848627,5.85447228840512,9.82631536857799,5.25970950900801,9.25718704123762,7.0674104335688,11.0172727298024,0.621339313086926,0,5.83114529571517,4.46737924234164,2.13896307178452,2.32487682259916,1.85851738039856,3.16864544343536,2.3436789271911,3.56521771047417,0.966336483304024,1.44015003128933,9.16432249821717,3.24360344464263,2.77319584345034,2.98817892848929,6.44496104402933,6.95384741734427,3.24527713703916,4.28299628806274,6.76475214652589,7.54447385884498,7.36031151498936,7.69917257844044,7.31209996466504,8.06450625052826,3.40095575422817,5.10567692760349,11.4833736460129,10.9125000636651,3.86379188064381,2.25218970541418,2.93042598827624,1.71494703263253,3.00943262421218,14.1187960654267,5.52390283808612,13.7494923225455,10.998603669996,12.3314853558716,12.0863023582352,8.10027000278167,6.75481804836331,9.9691329976525,10.3552062350364,2.69847103718859,7.18244772121856,5.46347538413229,8.0225216632537,5.44994222832754,9.92754945630076,11.3345831178824,11.743998262617,9.30665707816264,12.3821633764261,14.7017993936339,9.24269072791773,8.80230170216895,9.53974770832552,9.13223956394251,11.9073422820768,9.03897742369873,6.55891349576597,8.24171801606613,8.97913412819824,8.9146005620208,9.9386451449229,8.82213902805088,7.84870649814574,7.15231291156513,7.36147088657586,10.0610385080025,7.3659519202596,8.82726739998101,8.97827634652382,10.5585166130515,10.2444661670586,10.2307760792422,10.5357052006457,10.6098636039628,3.49734809113124,13.1001700729429,12.6773921888496,4.3996316375834,2.8676884485537,1.15933917810211 | ||
|short_description=p1@Galt | |short_description=p1@Galt | ||
}} | }} |
Latest revision as of 23:41, 26 September 2015
Short description: | p1@Galt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Galt_5end |
Coexpression cluster: | MCL_coexpression_mm9:3475 |
Association with transcript: | -192bp_to_ENSMUST00000132760_5end |
EntrezGene: | Galt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.42e-13 | 31 |
digestive tract diverticulum | 3.64e-11 | 23 |
sac | 3.64e-11 | 23 |
liver | 1.15e-10 | 22 |
epithelial sac | 1.15e-10 | 22 |
digestive gland | 1.15e-10 | 22 |
epithelium of foregut-midgut junction | 1.15e-10 | 22 |
anatomical boundary | 1.15e-10 | 22 |
hepatobiliary system | 1.15e-10 | 22 |
foregut-midgut junction | 1.15e-10 | 22 |
hepatic diverticulum | 1.15e-10 | 22 |
liver primordium | 1.15e-10 | 22 |
septum transversum | 1.15e-10 | 22 |
liver bud | 1.15e-10 | 22 |
exocrine gland | 6.20e-08 | 25 |
exocrine system | 6.20e-08 | 25 |
gastrointestinal system | 1.09e-07 | 47 |
gut epithelium | 1.09e-07 | 55 |
endoderm-derived structure | 1.25e-07 | 118 |
endoderm | 1.25e-07 | 118 |
presumptive endoderm | 1.25e-07 | 118 |
digestive system | 2.46e-07 | 116 |
digestive tract | 2.46e-07 | 116 |
primitive gut | 2.46e-07 | 116 |
subdivision of digestive tract | 7.13e-07 | 114 |