FFCP PHASE1:Mm9::chr7:53652043..53652056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16502 | |EntrezGene=16502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6 | |UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6 | ||
|association_with_transcript=176bp_to_ENSMUST00000025202,NM_001112739_5end | |association_with_transcript=176bp_to_ENSMUST00000025202,NM_001112739_5end | ||
|cluster_id=chr7:53652043..53652056,+ | |||
|description=CAGE_peak_15_at_Kcnc1_5end | |description=CAGE_peak_15_at_Kcnc1_5end | ||
|id=chr7:53652043..53652056,+ | |id=chr7:53652043..53652056,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.98e-08!33;CL:0000047!3.98e-08!33;CL:0000031!3.98e-08!33;CL:0000404!3.98e-08!33;CL:0000117!7.80e-08!23;CL:0000337!7.80e-08!23 | |ontology_enrichment_celltype=CL:0000540!3.98e-08!33;CL:0000047!3.98e-08!33;CL:0000031!3.98e-08!33;CL:0000404!3.98e-08!33;CL:0000117!7.80e-08!23;CL:0000337!7.80e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,4.17e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.33e-20!73;UBERON:0005743!1.33e-20!73;UBERON:0000073!7.83e-20!75;UBERON:0001016!7.83e-20!75;UBERON:0001049!3.55e-18!52;UBERON:0005068!3.55e-18!52;UBERON:0006241!3.55e-18!52;UBERON:0007135!3.55e-18!52;UBERON:0000955!4.00e-16!50;UBERON:0006238!4.00e-16!50;UBERON:0002616!8.05e-15!49;UBERON:0004121!1.91e-14!102;UBERON:0000924!1.91e-14!102;UBERON:0006601!1.91e-14!102;UBERON:0002020!1.93e-14!34;UBERON:0002346!7.76e-14!71;UBERON:0003075!7.76e-14!71;UBERON:0007284!7.76e-14!71;UBERON:0000033!1.13e-12!63;UBERON:0003076!3.16e-12!12;UBERON:0003057!3.16e-12!12;UBERON:0002791!2.37e-10!29;UBERON:0003528!2.37e-10!29;UBERON:0001893!2.37e-10!29;UBERON:0003080!4.82e-09!40;UBERON:0002298!2.00e-08!6;UBERON:0002780!5.19e-08!39;UBERON:0001890!5.19e-08!39;UBERON:0006240!5.19e-08!39;UBERON:0002240!1.04e-07!6;UBERON:0005174!1.04e-07!6;UBERON:0001137!1.04e-07!6;UBERON:0007811!1.18e-07!86;UBERON:0003056!1.30e-07!49;UBERON:0000153!2.76e-07!94;UBERON:0002021!3.71e-07!10;UBERON:0000411!3.71e-07!10;UBERON:0001950!3.71e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,6.55e-14,12;UBERON:0003057,6.55e-14,12;UBERON:0004733,1.08e-12,6;UBERON:0004732,1.08e-12,6;UBERON:0002028,1.08e-12,6;UBERON:0007277,1.08e-12,6;UBERON:0001896,6.19e-10,2;UBERON:0002298,6.19e-10,2;UBERON:0005290,6.19e-10,2;UBERON:0010096,6.19e-10,2;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002257,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0.919218786610021,0,0.638436690425939,0.307213066512487,0,0,0.52091337055676,0.558365998002762,0,0.15279824777681,1.17851434189467,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,6.70229461803056,0,0,0,0,0.898743836428936,1.37250180845588,0.125654352112864,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.586058432961016,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.467863216890817,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0.919218786610021,0,0.638436690425939,0.307213066512487,0,0,0.52091337055676,0.558365998002762,0,0.15279824777681,1.17851434189467,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,6.70229461803056,0,0,0,0,0.898743836428936,1.37250180845588,0.125654352112864,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.586058432961016,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.467863216890817,0,0,0,0.231867835620421 | ||
|short_description=p15@Kcnc1 | |short_description=p15@Kcnc1 | ||
}} | }} |
Latest revision as of 22:21, 26 September 2015
Short description: | p15@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 176bp_to_ENSMUST00000025202, NM_001112739_5end |
EntrezGene: | Kcnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 6.55e-14 | 12 |
chordal neural plate | 6.55e-14 | 12 |
segmental subdivision of hindbrain | 1.08e-12 | 6 |
segmental subdivision of nervous system | 1.08e-12 | 6 |
hindbrain | 1.08e-12 | 6 |
presumptive hindbrain | 1.08e-12 | 6 |
medulla oblongata | 6.19e-10 | 2 |
brainstem | 6.19e-10 | 2 |
myelencephalon | 6.19e-10 | 2 |
future myelencephalon | 6.19e-10 | 2 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
ventral horn of spinal cord | 4.17e-07 | 3 |