FFCP PHASE1:Mm9::chr9:55938017..55938045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19200 | |EntrezGene=19200 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=512 | |||
|TSSclassifier=NA | |||
|UniProt=P97814 | |UniProt=P97814 | ||
|association_with_transcript=234bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end | |association_with_transcript=234bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end | ||
|cluster_id=chr9:55938017..55938045,+ | |||
|description=CAGE_peak_4_at_Pstpip1_5end | |description=CAGE_peak_4_at_Pstpip1_5end | ||
|id=chr9:55938017..55938045,+ | |id=chr9:55938017..55938045,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.37e-09!32;CL:0002032!2.37e-09!32;CL:0000037!2.37e-09!32;CL:0000566!2.37e-09!32;CL:0000837!2.37e-09!32;CL:0000049!1.05e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.10e-15,19;CL:0000988,2.98e-14,32;CL:0002032,2.98e-14,32;CL:0000037,2.98e-14,32;CL:0000837,2.98e-14,32;CL:0000763,1.10e-11,16;CL:0002320,2.02e-11,46;CL:0000134,2.02e-11,46;CL:0000557,2.21e-09,7;CL:0002031,5.80e-09,25;CL:0000219,1.30e-08,54;CL:0000839,1.74e-08,13;CL:0000553,1.86e-07,6;CL:0000556,1.86e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.31e-13!48;UBERON:0002390!5.19e-12!45;UBERON:0003061!5.19e-12!45;UBERON:0002371!4.21e-11!16;UBERON:0002405!9.14e-11!70;UBERON:0001474!1.01e-10!22;UBERON:0004765!1.01e-10!22;UBERON:0001434!1.01e-10!22;UBERON:0002204!1.41e-09!32;UBERON:0003081!7.53e-09!88;UBERON:0000926!3.49e-08!193;UBERON:0004120!3.49e-08!193;UBERON:0006603!3.49e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.76e-19,16;UBERON:0001474,6.09e-18,22;UBERON:0004765,6.09e-18,22;UBERON:0001434,6.09e-18,22;UBERON:0002193,4.35e-16,48;UBERON:0002405,4.35e-16,48;UBERON:0002390,4.26e-15,45;UBERON:0003061,4.26e-15,45;UBERON:0002204,4.74e-15,32;UBERON:0002384,2.02e-11,46;UBERON:0003081,6.54e-08,87;UBERON:0002106,9.95e-07,6;UBERON:0004457,9.95e-07,6;UBERON:0000042,9.95e-07,6;UBERON:0004854,9.95e-07,6;UBERON:0009034,9.95e-07,6;UBERON:0002095,9.95e-07,6;UBERON:0004782,9.95e-07,6;UBERON:0003281,9.95e-07,6;UBERON:0009664,9.95e-07,6;UBERON:0002296,9.95e-07,6;UBERON:0005602,9.95e-07,6;UBERON:0001179,9.95e-07,6;UBERON:0006293,9.95e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,1.03298658753261,0.281577444303333,0.70219357896598,0,0.239316476986009,1.54080656938085,0.874204024189974,2.6648780945253,3.03712901084739,2.09868563438444,10.2525203741427,10.1464680868247,7.63901373236454,0.340173160604279,5.95745707205312,5.74639536105658,1.59992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,10.4632907684227,7.0320181007142,12.0410461113974,9.99993529652724,15.7100461540443,14.5653105909346,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,7.88578248471361,0.725362142011344,1.34437519656986,0,0.573066879877513,0,0,0,0,0,0,22.0475430733943,14.8329954385046,23.4458437932213,2.69640099466564,2.68952813725088,0,0,0,0.571301968807607,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.760079596425296,0,0.34255163915718,3.10725460376606,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.705532242814229,0.125666591329675,0.247194967734374,0.578397427679647,4.42305275974937,0.647067399789637,1.98757366614354,1.93950101254089,1.86391761218122,0.292780797011547,0,1.27728527604296,15.096705687746,16.7972764678154,18.9334638338866,0,0,0.251308704225729,0,0,0.20778804455956,0,0.712875546952214,3.35898820647251,1.0108910337347,0,0,0,0,0.452114453507145,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0,11.2354109970118,9.26452465612975,12.7873574728017,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0.16455984991348,0.656669856316381,0.56748166682099,0.730999937126662,0.878200461164203,0.671032093801859,0.420579897128254,0,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,1.42358718463353,0,0.502670417600539,0.596869416123452,0.58489226135736,1.79763881730844,0.648414149624083,0.597423819763102,0,0.114248512609729,0,0,0,0,0.252946148497029,0,0.156998727841375,0.493588655687202,0,0.166845105716094,0.393117990226406,0.674586337154561,0.405720242777006,1.20588579876208,0.50925170356284,0.863088412352432,1.62135226775035,0.549122826376163,0,1.11642284300551,2.18426371180192,0.252578877947112,0.179397413521912,0.482443521363367,2.58654466233247,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,1.26108115284953,1.7717175171902,1.43509291791738,1.96635977658886,2.59027472798843,3.03763023021174,30.1582567878545,34.8099637643974,0,1.37968373152366,0.642202359951168,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.325773918707152,1.15479086080775,2.65490276679926,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0.775284879504663,0.727067458955011,1.78248689192361,1.26414703174326,0,3.09406629744561,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0.304464949114599,1.17335854031855,1.27099242518292,0,2.4732937941222,0.645857706783622,0.72375509913787,0.954978752025092,0.492422699235184,1.7488850197791,0.927126510052548,3.41741761595705,3.50857675537478,1.85194527369712,1.50694765603753,2.32380187125743,3.20289442489132,29.406268388937,38.6266008413296,36.3465931105635,0,0.316335993581135,0,0.432021363287205,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0.777689839750757,0.621339313086926,0,0,0.330916980914195,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0.576060012515731,0.632022241256357,0.810900861160657,1.1298205288131,1.03936658382236,0.179026695667481,0.39736270956253,1.44234539423963,0.295379054349154,0.403865799792591,1.21930890648,0.907435666231565,1.26695244961678,1.05833025804362,0.350630706544707,1.36038230169127,0.221985953374065,0.0897138566094757,0,0.965947970160952,2.25218970541418,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.919217542250071,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.842773567228942,0.192075457214608,0.631790158511746,0.952587382566147,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,1.06485483695602,0.238436189947321,0.581385666529314,0.188218760830661,0.676916863133412,0.182927972872773,0.263069711437843,0.543216455383447,0,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0,0,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,1.85494268496337 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|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,1.03298658753261,0.281577444303333,0.70219357896598,0,0.239316476986009,1.54080656938085,0.874204024189974,2.6648780945253,3.03712901084739,2.09868563438444,10.2525203741427,10.1464680868247,7.63901373236454,0.340173160604279,5.95745707205312,5.74639536105658,1.59992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,10.4632907684227,7.0320181007142,12.0410461113974,9.99993529652724,15.7100461540443,14.5653105909346,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,7.88578248471361,0.725362142011344,1.34437519656986,0,0.573066879877513,0,0,0,0,0,0,22.0475430733943,14.8329954385046,23.4458437932213,2.69640099466564,2.68952813725088,0,0,0,0.571301968807607,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.760079596425296,0,0.34255163915718,3.10725460376606,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.705532242814229,0.125666591329675,0.247194967734374,0.578397427679647,4.42305275974937,0.647067399789637,1.98757366614354,1.93950101254089,1.86391761218122,0.292780797011547,0,1.27728527604296,15.096705687746,16.7972764678154,18.9334638338866,0,0,0.251308704225729,0,0,0.20778804455956,0,0.712875546952214,3.35898820647251,1.0108910337347,0,0,0,0,0.452114453507145,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0,11.2354109970118,9.26452465612975,12.7873574728017,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0.16455984991348,0.656669856316381,0.56748166682099,0.730999937126662,0.878200461164203,0.671032093801859,0.420579897128254,0,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,1.42358718463353,0,0.502670417600539,0.596869416123452,0.58489226135736,1.79763881730844,0.648414149624083,0.597423819763102,0,0.114248512609729,0,0,0,0,0.252946148497029,0,0.156998727841375,0.493588655687202,0,0.166845105716094,0.393117990226406,0.674586337154561,0.405720242777006,1.20588579876208,0.50925170356284,0.863088412352432,1.62135226775035,0.549122826376163,0,1.11642284300551,2.18426371180192,0.252578877947112,0.179397413521912,0.482443521363367,2.58654466233247,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,1.26108115284953,1.7717175171902,1.43509291791738,1.96635977658886,2.59027472798843,3.03763023021174,30.1582567878545,34.8099637643974,0,1.37968373152366,0.642202359951168,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.325773918707152,1.15479086080775,2.65490276679926,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0.775284879504663,0.727067458955011,1.78248689192361,1.26414703174326,0,3.09406629744561,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0.304464949114599,1.17335854031855,1.27099242518292,0,2.4732937941222,0.645857706783622,0.72375509913787,0.954978752025092,0.492422699235184,1.7488850197791,0.927126510052548,3.41741761595705,3.50857675537478,1.85194527369712,1.50694765603753,2.32380187125743,3.20289442489132,29.406268388937,38.6266008413296,36.3465931105635,0,0.316335993581135,0,0.432021363287205,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0.777689839750757,0.621339313086926,0,0,0.330916980914195,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0.576060012515731,0.632022241256357,0.810900861160657,1.1298205288131,1.03936658382236,0.179026695667481,0.39736270956253,1.44234539423963,0.295379054349154,0.403865799792591,1.21930890648,0.907435666231565,1.26695244961678,1.05833025804362,0.350630706544707,1.36038230169127,0.221985953374065,0.0897138566094757,0,0.965947970160952,2.25218970541418,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.919217542250071,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.842773567228942,0.192075457214608,0.631790158511746,0.952587382566147,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,1.06485483695602,0.238436189947321,0.581385666529314,0.188218760830661,0.676916863133412,0.182927972872773,0.263069711437843,0.543216455383447,0,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0,0,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,1.85494268496337 | ||
|short_description=p4@Pstpip1 | |short_description=p4@Pstpip1 | ||
}} | }} |
Latest revision as of 20:59, 26 September 2015
Short description: | p4@Pstpip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pstpip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:512 |
Association with transcript: | 234bp_to_ENSMUST00000138646, ENSMUST00000147360, NM_011193, uc009psv.2_5end |
EntrezGene: | Pstpip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.10e-15 | 19 |
hematopoietic cell | 2.98e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.98e-14 | 32 |
hematopoietic stem cell | 2.98e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.98e-14 | 32 |
myeloid cell | 1.10e-11 | 16 |
connective tissue cell | 2.02e-11 | 46 |
mesenchymal cell | 2.02e-11 | 46 |
granulocyte monocyte progenitor cell | 2.21e-09 | 7 |
hematopoietic lineage restricted progenitor cell | 5.80e-09 | 25 |
motile cell | 1.30e-08 | 54 |
myeloid lineage restricted progenitor cell | 1.74e-08 | 13 |
megakaryocyte progenitor cell | 1.86e-07 | 6 |
megakaryocyte | 1.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.76e-19 | 16 |
bone element | 6.09e-18 | 22 |
skeletal element | 6.09e-18 | 22 |
skeletal system | 6.09e-18 | 22 |
hemolymphoid system | 4.35e-16 | 48 |
immune system | 4.35e-16 | 48 |
hematopoietic system | 4.26e-15 | 45 |
blood island | 4.26e-15 | 45 |
musculoskeletal system | 4.74e-15 | 32 |
connective tissue | 2.02e-11 | 46 |
lateral plate mesoderm | 6.54e-08 | 87 |
spleen | 9.95e-07 | 6 |
cavity lining | 9.95e-07 | 6 |
serous membrane | 9.95e-07 | 6 |
gastrointestinal system mesentery | 9.95e-07 | 6 |
stomach region | 9.95e-07 | 6 |
mesentery | 9.95e-07 | 6 |
gastrointestinal system serosa | 9.95e-07 | 6 |
mesentery of stomach | 9.95e-07 | 6 |
gut mesentery | 9.95e-07 | 6 |
dorsal mesentery | 9.95e-07 | 6 |
dorsal mesogastrium | 9.95e-07 | 6 |
peritoneal cavity | 9.95e-07 | 6 |
spleen primordium | 9.95e-07 | 6 |