Personal tools

FFCP PHASE1:Mm9::chr15:59480199..59480242,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=211770
|EntrezGene=211770
|HGNC=
|HGNC=
|MCL_coexpression_id=1225
|TSSclassifier=NA
|UniProt=Q8K4K4
|UniProt=Q8K4K4
|association_with_transcript=0bp_to_ENSMUST00000118228,NM_144549,uc007vxw.1,uc007vxx.1_5end
|association_with_transcript=0bp_to_ENSMUST00000118228,NM_144549,uc007vxw.1,uc007vxx.1_5end
|cluster_id=chr15:59480199..59480242,+
|description=CAGE_peak_1_at_Trib1_5end
|description=CAGE_peak_1_at_Trib1_5end
|id=chr15:59480199..59480242,+
|id=chr15:59480199..59480242,+
|ontology_enrichment_celltype=CL:0000066!3.74e-07!25
|ontology_enrichment_celltype=CL:0000066!3.74e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,3.55e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.94e-09!130;UBERON:0000925!4.94e-09!130;UBERON:0006595!4.94e-09!130;UBERON:0001007!5.94e-09!128;UBERON:0001555!5.94e-09!128;UBERON:0007026!5.94e-09!128;UBERON:0004921!1.67e-08!126;UBERON:0004185!1.67e-08!126;UBERON:0000160!2.63e-08!43;UBERON:0000344!4.29e-07!15;UBERON:0005409!5.53e-07!59
|ontology_enrichment_uberon=UBERON:0004119!4.94e-09!130;UBERON:0000925!4.94e-09!130;UBERON:0006595!4.94e-09!130;UBERON:0001007!5.94e-09!128;UBERON:0001555!5.94e-09!128;UBERON:0007026!5.94e-09!128;UBERON:0004921!1.67e-08!126;UBERON:0004185!1.67e-08!126;UBERON:0000160!2.63e-08!43;UBERON:0000344!4.29e-07!15;UBERON:0005409!5.53e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.31e-08,118;UBERON:0000925,7.31e-08,118;UBERON:0006595,7.31e-08,118;UBERON:0000160,8.43e-08,31;UBERON:0001007,8.58e-08,116;UBERON:0001555,8.58e-08,116;UBERON:0007026,8.58e-08,116;UBERON:0004921,2.25e-07,114;UBERON:0000344,4.29e-07,15
|phase1_expression=12.6517589212787,102.598769845972,109.654816692878,83.7825865319919,112.701539237928,69.3341392996105,62.1409623984098,20.2723617803275,419.691180734119,476.555375591579,29.6207085030124,26.085495991475,1.88320802924326,1.48614684112296,3.99731714178795,0.809901069559304,1.39912375625629,2.5236973228659,2.60517423850904,5.51706547337439,10.2902381082794,0.496454756004426,0.261199789138935,27.6786891432594,29.3643879765978,94.7482740789783,74.0910633393609,74.5530465093176,39.5248712469258,20.9185007700743,39.2463003859889,22.2260735710871,19.0670084151217,0,39.8615235256759,23.9377889316229,44.5089196651965,310.969001637522,195.33383613095,96.8518926351527,550.584672797029,459.006565892076,202.943327567022,30.8447204040164,39.2328723819521,16.3356609423897,15.6478268869608,7.63088047331563,45.4750398260357,56.1902408324679,10.9189408867783,17.2503077237966,4.53013036355888,4.35217285206807,3.6970317905671,15.4355661621568,8.30946975822394,17.0171790451556,2.02316460859598,1.5869729378161,0.633831403506179,22.7025836486319,18.6751907183339,49.4944844504769,58.3431153914515,51.8650483910653,37.749613925319,24.974189845901,0.725827286159344,1.62007125998029,1.05162480675691,0.856952953211411,1.32521124570968,0.61245399607477,0.575072826109418,0.919218786610021,2.20231761998777,2.042997409363,4.45458946443106,1.18697658957174,1.28082701043374,2.6045668527838,2.51264699101243,1.68828783009504,2.75036845998258,5.00868595305235,2.42031857358475,0.931997229126503,50.8880019198997,59.550389364147,141.453870486419,93.7862025909711,390.983516881957,108.480341519201,92.268251277569,86.9172160968831,30.4764391685902,8.52151612890289,7.53379413348319,6.71345191569646,12.1125341007945,5.13305909657271,5.09610479413291,0,21.4326130601102,26.6027858748854,24.7706978057244,87.3506679850809,19.9382170408322,10.6878340126674,4.16364784238726,10.6562917409249,10.1470818792666,4.97384713823654,6.34979018532806,8.67099480174761,31.8881508377342,57.6951434110447,19.4614321428972,11.8089800461609,13.0296495891632,10.1823803158397,46.5979403045305,10.5401086924157,3.56059401582874,57.2223803667245,163.308014701569,95.3845342279518,127.832648435503,3.74476598512057,6.40500843946077,1.00523481690292,10.6032835317289,3.3243009452943,5.81806524766768,3.0825839982874,9.3692214742291,14.5556155613809,26.2831668771022,41.6674874655218,6.8963834770233,7.35686734187113,8.82304436046211,9.79581315932148,20.138803748793,19.7295129238669,21.9262035469765,33.8901415668111,3.66465587985832,5.67318240503458,7.74184946321375,5.91828477554452,8.61946472599353,16.3678518265418,17.9030458674911,2.38841120182192,93.3943539126602,98.0495526107065,88.6590118114249,6.21377317606506,4.69052119962192,5.76198596675248,7.33908680314152,5.90292695242211,3.08534225774756,4.41814495025775,7.51165523918934,5.3712057488898,3.94943639792353,5.08919138645195,8.18794976413143,9.0643992203706,9.87975518809728,7.64976586934119,5.04695876553905,3.2929475961371,101.76898515901,36.2297276329056,4.90562976231038,5.34144345279009,9.14958975386863,13.5127961497639,12.2307924114679,15.0278244628922,37.4877958620164,23.8813484349816,17.5934646160189,23.0789507567735,20.6661932346267,39.5480539807857,41.9307816756907,43.6119388427064,10.0523987505133,5.36968009265725,12.3978509240388,8.75700709734851,7.75809948670503,12.2036326609154,6.9560190836683,10.1851002105925,7.22194148070324,12.2163192282583,55.1401886382097,3.83743743147016,5.50365186316968,2.69834534861824,8.31726497692862,8.92355491083942,17.8238096246994,21.28951417136,20.9154442539796,22.5140358814227,69.0087391331302,33.1205443424968,40.2528598317783,41.1703571053792,32.1121370204223,50.1741262217902,34.9183529414883,4.9267767060326,11.7334783038259,9.16623463186016,12.6732734075791,14.2380318825543,28.0891496245496,48.7834119644497,22.3841904630791,21.7035395855799,19.4534817762134,32.4449363137161,27.8022820804092,28.7851626577208,1.50791283939272,15.7732648307426,31.4729134732183,28.6974216156922,1.9266070798535,3.98519734413491,39.3443868904021,19.1877904675323,3.15508219416257,5.0757036758563,11.4174400798383,17.9226598464414,32.3058077419471,23.7784285862619,4.45291771842384,9.64444331107329,9.88219444866309,19.2792789853084,12.3487874131194,6.41036173202119,8.95878276444668,27.5500105364134,27.8764790513922,13.110154352369,10.2790009368015,14.5225911412042,15.3556984298002,17.5238034328039,26.1012576099903,13.8142817201452,13.1904030002347,21.1744627816997,23.1920938864997,19.5957532171555,11.5749465956288,3.06103859853227,3.75140182969988,5.14408884075822,3.90148514013002,6.59964625127661,5.92376474167636,20.0946866415636,13.3762873596315,13.1335883935569,26.6839361646504,46.4979233294974,24.3811284310817,32.7499182359886,48.5845440092765,62.0452601036332,36.7265854153612,3.15223013417866,5.80960994712699,10.5257302661243,15.1859512443164,4.70921142511728,4.23752105935178,5.49067615695654,195.135237632946,181.237130759137,160.726569534545,36.2774834845743,5.852215881251,11.1825706919767,8.96444328820951,17.7725051612298,15.2853794622324,12.812112906558,20.7460173870593,19.6316956488022,64.1594117794375,75.8033961966049,1.12738587736838,2.8408143748356,3.47462829959905,5.05573089694524,2.97067593998782,2.70329800785245,2.69921648885234,3.1249052362548,3.46035836604846,0.241584120826006,3.16833006883652,7.58426689507628,12.3662381327,9.55211901632893,3.24802057444488,2.50637373934474,2.38417625737518,4.32703618271888,3.10148007066612,4.2405908978222,2.97206545954499,3.62974266492626,4.97035191772737,3.65604998233252,3.85693777199178,29.4749498699775,4.88369097422942,3.85769583420746,5.20442310728643,9.27310051354514,16.7037403151552,17.2162526811229,43.7311493321294,22.5707446815914,5.0827665835536,11.5081309126794,12.6037012956667,13.9201077698387,8.90607275701835,6.0431511791176,15.5255175053315,17.5625269257446,72.9559278464569,40.385304316642,2.90604573235695,4.78829848081237,2.90247129782028,8.99494853152688,5.24032906569956,12.3175150661509,12.2235700290888,8.44743734679466,9.62757628775446,7.83361356467772,9.12525479604863,9.24269072791773,7.86588662747012,8.77144587946709,6.94969174362921,7.62069906052918,7.64836551236046,7.33055037762079,7.82963211526283,7.94874168725746,8.57173130963539,6.92155644021416,4.5302876089991,6.24989591519013,7.34053167239579,8.71530461284268,7.3171189149109,8.15516105457313,7.33342214767654,4.48913817326191,5.69448086996036,6.2057823896605,4.91077251803627,4.80304207676495,11.7673032698496,9.99242311751784,10.5269223800434,22.346589621023,14.1553365730944,18.5296792060393,14.1439379728457
|phase1_expression=12.6517589212787,102.598769845972,109.654816692878,83.7825865319919,112.701539237928,69.3341392996105,62.1409623984098,20.2723617803275,419.691180734119,476.555375591579,29.6207085030124,26.085495991475,1.88320802924326,1.48614684112296,3.99731714178795,0.809901069559304,1.39912375625629,2.5236973228659,2.60517423850904,5.51706547337439,10.2902381082794,0.496454756004426,0.261199789138935,27.6786891432594,29.3643879765978,94.7482740789783,74.0910633393609,74.5530465093176,39.5248712469258,20.9185007700743,39.2463003859889,22.2260735710871,19.0670084151217,0,39.8615235256759,23.9377889316229,44.5089196651965,310.969001637522,195.33383613095,96.8518926351527,550.584672797029,459.006565892076,202.943327567022,30.8447204040164,39.2328723819521,16.3356609423897,15.6478268869608,7.63088047331563,45.4750398260357,56.1902408324679,10.9189408867783,17.2503077237966,4.53013036355888,4.35217285206807,3.6970317905671,15.4355661621568,8.30946975822394,17.0171790451556,2.02316460859598,1.5869729378161,0.633831403506179,22.7025836486319,18.6751907183339,49.4944844504769,58.3431153914515,51.8650483910653,37.749613925319,24.974189845901,0.725827286159344,1.62007125998029,1.05162480675691,0.856952953211411,1.32521124570968,0.61245399607477,0.575072826109418,0.919218786610021,2.20231761998777,2.042997409363,4.45458946443106,1.18697658957174,1.28082701043374,2.6045668527838,2.51264699101243,1.68828783009504,2.75036845998258,5.00868595305235,2.42031857358475,0.931997229126503,50.8880019198997,59.550389364147,141.453870486419,93.7862025909711,390.983516881957,108.480341519201,92.268251277569,86.9172160968831,30.4764391685902,8.52151612890289,7.53379413348319,6.71345191569646,12.1125341007945,5.13305909657271,5.09610479413291,0,21.4326130601102,26.6027858748854,24.7706978057244,87.3506679850809,19.9382170408322,10.6878340126674,4.16364784238726,10.6562917409249,10.1470818792666,4.97384713823654,6.34979018532806,8.67099480174761,31.8881508377342,57.6951434110447,19.4614321428972,11.8089800461609,13.0296495891632,10.1823803158397,46.5979403045305,10.5401086924157,3.56059401582874,57.2223803667245,163.308014701569,95.3845342279518,127.832648435503,3.74476598512057,6.40500843946077,1.00523481690292,10.6032835317289,3.3243009452943,5.81806524766768,3.0825839982874,9.3692214742291,14.5556155613809,26.2831668771022,41.6674874655218,6.8963834770233,7.35686734187113,8.82304436046211,9.79581315932148,20.138803748793,19.7295129238669,21.9262035469765,33.8901415668111,3.66465587985832,5.67318240503458,7.74184946321375,5.91828477554452,8.61946472599353,16.3678518265418,17.9030458674911,2.38841120182192,93.3943539126602,98.0495526107065,88.6590118114249,6.21377317606506,4.69052119962192,5.76198596675248,7.33908680314152,5.90292695242211,3.08534225774756,4.41814495025775,7.51165523918934,5.3712057488898,3.94943639792353,5.08919138645195,8.18794976413143,9.0643992203706,9.87975518809728,7.64976586934119,5.04695876553905,3.2929475961371,101.76898515901,36.2297276329056,4.90562976231038,5.34144345279009,9.14958975386863,13.5127961497639,12.2307924114679,15.0278244628922,37.4877958620164,23.8813484349816,17.5934646160189,23.0789507567735,20.6661932346267,39.5480539807857,41.9307816756907,43.6119388427064,10.0523987505133,5.36968009265725,12.3978509240388,8.75700709734851,7.75809948670503,12.2036326609154,6.9560190836683,10.1851002105925,7.22194148070324,12.2163192282583,55.1401886382097,3.83743743147016,5.50365186316968,2.69834534861824,8.31726497692862,8.92355491083942,17.8238096246994,21.28951417136,20.9154442539796,22.5140358814227,69.0087391331302,33.1205443424968,40.2528598317783,41.1703571053792,32.1121370204223,50.1741262217902,34.9183529414883,4.9267767060326,11.7334783038259,9.16623463186016,12.6732734075791,14.2380318825543,28.0891496245496,48.7834119644497,22.3841904630791,21.7035395855799,19.4534817762134,32.4449363137161,27.8022820804092,28.7851626577208,1.50791283939272,15.7732648307426,31.4729134732183,28.6974216156922,1.9266070798535,3.98519734413491,39.3443868904021,19.1877904675323,3.15508219416257,5.0757036758563,11.4174400798383,17.9226598464414,32.3058077419471,23.7784285862619,4.45291771842384,9.64444331107329,9.88219444866309,19.2792789853084,12.3487874131194,6.41036173202119,8.95878276444668,27.5500105364134,27.8764790513922,13.110154352369,10.2790009368015,14.5225911412042,15.3556984298002,17.5238034328039,26.1012576099903,13.8142817201452,13.1904030002347,21.1744627816997,23.1920938864997,19.5957532171555,11.5749465956288,3.06103859853227,3.75140182969988,5.14408884075822,3.90148514013002,6.59964625127661,5.92376474167636,20.0946866415636,13.3762873596315,13.1335883935569,26.6839361646504,46.4979233294974,24.3811284310817,32.7499182359886,48.5845440092765,62.0452601036332,36.7265854153612,3.15223013417866,5.80960994712699,10.5257302661243,15.1859512443164,4.70921142511728,4.23752105935178,5.49067615695654,195.135237632946,181.237130759137,160.726569534545,36.2774834845743,5.852215881251,11.1825706919767,8.96444328820951,17.7725051612298,15.2853794622324,12.812112906558,20.7460173870593,19.6316956488022,64.1594117794375,75.8033961966049,1.12738587736838,2.8408143748356,3.47462829959905,5.05573089694524,2.97067593998782,2.70329800785245,2.69921648885234,3.1249052362548,3.46035836604846,0.241584120826006,3.16833006883652,7.58426689507628,12.3662381327,9.55211901632893,3.24802057444488,2.50637373934474,2.38417625737518,4.32703618271888,3.10148007066612,4.2405908978222,2.97206545954499,3.62974266492626,4.97035191772737,3.65604998233252,3.85693777199178,29.4749498699775,4.88369097422942,3.85769583420746,5.20442310728643,9.27310051354514,16.7037403151552,17.2162526811229,43.7311493321294,22.5707446815914,5.0827665835536,11.5081309126794,12.6037012956667,13.9201077698387,8.90607275701835,6.0431511791176,15.5255175053315,17.5625269257446,72.9559278464569,40.385304316642,2.90604573235695,4.78829848081237,2.90247129782028,8.99494853152688,5.24032906569956,12.3175150661509,12.2235700290888,8.44743734679466,9.62757628775446,7.83361356467772,9.12525479604863,9.24269072791773,7.86588662747012,8.77144587946709,6.94969174362921,7.62069906052918,7.64836551236046,7.33055037762079,7.82963211526283,7.94874168725746,8.57173130963539,6.92155644021416,4.5302876089991,6.24989591519013,7.34053167239579,8.71530461284268,7.3171189149109,8.15516105457313,7.33342214767654,4.48913817326191,5.69448086996036,6.2057823896605,4.91077251803627,4.80304207676495,11.7673032698496,9.99242311751784,10.5269223800434,22.346589621023,14.1553365730944,18.5296792060393,14.1439379728457
|short_description=p1@Trib1
|short_description=p1@Trib1
}}
}}

Latest revision as of 20:55, 26 September 2015

Short description:p1@Trib1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trib1_5end
Coexpression cluster:MCL_coexpression_mm9:1225
Association with transcript: 0bp_to_ENSMUST00000118228, NM_144549, uc007vxw.1, uc007vxx.1_5end
EntrezGene:Trib1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trib1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5102.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6109.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I383.78
CD326+ enterocyte, pool2.CNhs13197.11849-124I4112.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I769.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I862.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7419.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2476.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E629.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.09
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D127.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D229.36
GP2+ M cell, pool1.CNhs13228.11845-124H994.75
GP2+ M cell, pool2.CNhs13231.11846-124I174.09
GP2+ M cell, pool3.CNhs13240.11847-124I274.55
Ileum epithelium, pool1.CNhs13199.10252-104B939.52
Ileum epithelium, pool2.CNhs13232.10253-104C120.92
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C839.25
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F539.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.94
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F744.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8310.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1195.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H396.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9550.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2459.01
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4202.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D830.84
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D939.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B845.48
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C356.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C749.49
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E758.34
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D251.87
Mouse Microglia, donor1.CNhs12629.11718-123C837.75
Mouse Microglia, donor2.CNhs12634.11736-123E824.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D950.89
Mouse Schwann, donor2.CNhs12573.11746-123F959.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3141.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F793.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C4390.98
Mouse hepatocyte, donor3.CNhs12615.11637-122C8108.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F492.27
Mouse hepatocyte, donor8.CNhs13091.11824-124F686.92
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B687.35
accessory axillary lymph node, adult.CNhs10475.1063-29H919.94
adrenal gland, adult.CNhs10508.49-24D710.69
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D610.66
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C16.35
adrenal gland, neonate N25.CNhs11223.1377-27I38.67
amnion, adult pregnant day17.5.CNhs10488.583-22A831.89
aorta, adult.CNhs10498.46-23H157.70
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A613.03
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H757.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7163.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D195.38
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4127.83
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.37
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.56
epididymis, adult.CNhs10490.58-23B226.28
eyeball, adult.CNhs10484.31-12G441.67
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C98.82
eyeball, embryo E17.CNhs11023.1261-18D49.80
eyeball, neonate N00.CNhs11207.633-15C620.14
eyeball, neonate N01.CNhs11140.1532-43E719.73
eyeball, neonate N02.CNhs11205.1551-44G821.93
eyeball, neonate N16.CNhs11188.777-19A233.89
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C893.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D298.05
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D588.66
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G18.19
heart, neonate N20.CNhs11127.821-26I69.06
heart, neonate N25.CNhs11196.1351-25D39.88
heart, neonate N30.CNhs11202.1390-42D27.65
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I3101.77
intestine, adult.CNhs10496.178-9A336.23
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H413.51
intestine, embryo E17.CNhs10582.482-18D312.23
intestine, embryo E18.CNhs10526.1289-20F715.03
intestine, neonate N00.CNhs11126.644-26D137.49
intestine, neonate N01.CNhs11192.1322-23E923.88
intestine, neonate N06.CNhs11102.688-20B817.59
intestine, neonate N07.CNhs11095.720-20F223.08
intestine, neonate N10.CNhs11098.755-23A520.67
intestine, neonate N20.CNhs11187.827-18D139.55
intestine, neonate N25.CNhs11121.1352-25E341.93
intestine, neonate N30.CNhs11131.1384-42G143.61
kidney, embryo E14.CNhs10606.411-4I910.05
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I28.76
kidney, embryo E18.CNhs11001.1288-20C77.76
kidney, neonate N00.CNhs11214.646-21G712.20
kidney, neonate N10.CNhs11206.758-6D56.96
kidney, neonate N20.CNhs11113.832-19I110.19
kidney, neonate N25.CNhs11122.1353-25F37.22
kidney, neonate N30.CNhs11203.1385-42H112.22
liver, adult pregnant day01.CNhs10466.508-5B255.14
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D78.32
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A317.82
liver, embryo E18.CNhs10579.499-43G421.29
liver, neonate N00.CNhs11117.641-24F420.92
liver, neonate N03.CNhs11123.1345-25G222.51
liver, neonate N06.CNhs11101.684-20A869.01
liver, neonate N07.CNhs11103.716-20H233.12
liver, neonate N10.CNhs11115.751-24B940.25
liver, neonate N20.CNhs11220.823-25A341.17
liver, neonate N25.CNhs11198.1368-26H132.11
liver, neonate N30.CNhs11106.1382-42D150.17
lung, adult.CNhs10474.28-22B134.92
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F811.73
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B612.67
lung, embryo E17.CNhs10605.480-44A614.24
lung, embryo E18.CNhs10583.1287-20I628.09
lung, neonate N00.CNhs11224.640-42C648.78
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A321.70
lung, neonate N10.CNhs11219.750-23E619.45
lung, neonate N20.CNhs11109.822-18A432.44
lung, neonate N25.CNhs11119.1359-25C727.80
lung, neonate N30.CNhs11133.1394-42H228.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H228.70
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C739.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.31
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H76.41
ovary, neonate N00.CNhs11217.1299-22I48.96
oviduct, adult pregnant day01.CNhs10500.988-6G627.55
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F413.11
pancreas, embryo E15.CNhs11042.1556-45F210.28
pancreas, embryo E16.CNhs11003.460-26E514.52
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I717.52
pancreas, neonate N00.CNhs11105.645-26G926.10
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B621.17
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E920.09
placenta, adult pregnant day10.CNhs10472.539-13I713.38
placenta, adult pregnant day17.CNhs10464.577-18G313.13
prostate, adult.CNhs10470.859-1F826.68
skin, adult.CNhs10492.30-1C346.50
skin, neonate N00.CNhs11124.650-25G424.38
skin, neonate N03.CNhs11215.662-22H332.75
skin, neonate N06.CNhs11097.693-20I548.58
skin, neonate N10.CNhs11108.762-6C462.05
small intestine, neonate N16.CNhs11114.790-21I136.73
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F215.19
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6195.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9181.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3160.73
stomach, adult.CNhs10503.33-1H636.28
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G811.18
stomach, embryo E16.CNhs11022.459-17D48.96
stomach, embryo E17.CNhs11006.1035-18D517.77
stomach, embryo E18.CNhs10999.1286-20C615.29
stomach, neonate N03.CNhs11193.1340-24B812.81
stomach, neonate N07.CNhs11210.718-18A920.75
stomach, neonate N25.CNhs11104.1355-25E419.63
stomach, neonate N30.CNhs11134.1386-42I164.16
submandibular gland, adult.CNhs10469.59-29C175.80
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I412.37
thymus, embryo E15.CNhs11005.430-45I29.55
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.24
thymus, neonate N07.CNhs11211.713-19D32.97
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G23.86
tongue, adult.CNhs10499.32-1B429.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F516.70
uterus, adult.CNhs10509.92-27E517.22
vagina, adult.CNhs10502.89-27D543.73
vesicular gland, adult.CNhs10491.51-27F822.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A872.96
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.39
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F212.32
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F911.77
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C222.35
whole body, neonate N01.CNhs10576.659-23C614.16
whole body, neonate N06.CNhs10515.692-21D118.53
whole body, neonate N10.CNhs10518.761-6B414.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.55e-0725

Uber anatomy
Ontology termp-valuen
endoderm-derived structure7.31e-08118
endoderm7.31e-08118
presumptive endoderm7.31e-08118
intestine8.43e-0831
digestive system8.58e-08116
digestive tract8.58e-08116
primitive gut8.58e-08116
subdivision of digestive tract2.25e-07114
mucosa4.29e-0715
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:59480199..59480242,%2B&oldid=4273878"