FFCP PHASE1:Mm9::chr1:175843064..175843069,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381308 | |EntrezGene=381308 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q08619 | |UniProt=Q08619 | ||
|association_with_transcript=-11bp_to_ENSMUST00000009340,NM_001033450_5end | |association_with_transcript=-11bp_to_ENSMUST00000009340,NM_001033450_5end | ||
|cluster_id=chr1:175843064..175843069,- | |||
|description=CAGE_peak_5_at_Mnda_5end | |description=CAGE_peak_5_at_Mnda_5end | ||
|id=chr1:175843064..175843069,- | |id=chr1:175843064..175843069,- | ||
|ontology_enrichment_celltype=CL:0000355!3.75e-15!9;CL:0000680!7.86e-11!6;CL:0000183!7.86e-11!6;CL:0000187!7.86e-11!6;CL:0000056!7.86e-11!6;CL:0000222!3.87e-09!7;CL:0002194!5.31e-08!4;CL:0000766!5.31e-08!4;CL:0000576!5.31e-08!4;CL:0000235!5.31e-08!4;CL:0002009!5.31e-08!4;CL:0000040!5.31e-08!4;CL:0000559!5.31e-08!4;CL:0000219!4.84e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.77e-15,6;CL:0000187,1.77e-15,6;CL:0000056,1.77e-15,6;CL:0002476,1.38e-13,2;CL:0000222,2.60e-13,7;CL:0000355,2.06e-10,9;CL:0002092,4.11e-09,3;CL:0002540,4.11e-09,3;CL:0002494,1.21e-08,3;CL:0000737,1.21e-08,3;CL:0000746,1.21e-08,3;CL:0000513,1.21e-08,3;CL:0000192,1.89e-08,3;CL:0000359,1.89e-08,3;CL:0002539,1.89e-08,3;CL:0000514,1.89e-08,3;CL:0002194,3.21e-07,4;CL:0000766,3.21e-07,4;CL:0000234,3.21e-07,4;CL:0000576,3.21e-07,4;CL:0000235,3.21e-07,4;CL:0000864,3.21e-07,4;CL:0002009,3.21e-07,4;CL:0000040,3.21e-07,4;CL:0000559,3.21e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.23e-16!32;UBERON:0001134!3.75e-15!9;UBERON:0002036!3.75e-15!9;UBERON:0002385!3.75e-15!9;UBERON:0000486!3.75e-15!9;UBERON:0001015!3.75e-15!9;UBERON:0004290!3.75e-15!9;UBERON:0003082!3.75e-15!9;UBERON:0000383!2.02e-13!10;UBERON:0002329!5.24e-12!11;UBERON:0003077!5.24e-12!11;UBERON:0003059!5.24e-12!11;UBERON:0007282!5.24e-12!11;UBERON:0009618!5.24e-12!11;UBERON:0007285!5.24e-12!11;UBERON:0000914!1.64e-10!17;UBERON:0002371!1.50e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.11e-11,32;UBERON:0001134,2.06e-10,9;UBERON:0002036,2.06e-10,9;UBERON:0002385,2.06e-10,9;UBERON:0000486,2.06e-10,9;UBERON:0007503,2.06e-10,9;UBERON:0001015,2.06e-10,9;UBERON:0002329,2.06e-10,9;UBERON:0003082,2.06e-10,9;UBERON:0003059,2.06e-10,9;UBERON:0007282,2.06e-10,9;UBERON:0004290,2.06e-10,9;UBERON:0009618,2.06e-10,9;UBERON:0000383,2.15e-09,10;UBERON:0007524,1.47e-08,11;UBERON:0003077,1.47e-08,11;UBERON:0007285,1.47e-08,11;UBERON:0001135,1.89e-08,3;UBERON:0004237,1.89e-08,3;UBERON:0004695,1.89e-08,3;UBERON:0002111,1.89e-08,3;UBERON:0004178,1.89e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0,1.25896817975577,1.4192770370732,0.367093504323363,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,1.28629718017973,0.85960031981627,2.06268836910977,0,0,0,0,0.889294796111139,0.899899717281399,5.93319817540185,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.530083353332288,1.5870027622425,0,0,0,0,0,0,0.280888840263504,2.55645483867087,1.81850203222008,2.12003744706204,0,2.56652954828636,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,12.0633027151418,19.5806046174735,0,0.275936746304732,0,0,1.96721934452011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0,1.25896817975577,1.4192770370732,0.367093504323363,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,1.28629718017973,0.85960031981627,2.06268836910977,0,0,0,0,0.889294796111139,0.899899717281399,5.93319817540185,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.530083353332288,1.5870027622425,0,0,0,0,0,0,0.280888840263504,2.55645483867087,1.81850203222008,2.12003744706204,0,2.56652954828636,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,12.0633027151418,19.5806046174735,0,0.275936746304732,0,0,1.96721934452011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Mnda | |short_description=p5@Mnda | ||
}} | }} |
Latest revision as of 20:50, 26 September 2015
Short description: | p5@Mnda |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mnda_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | -11bp_to_ENSMUST00000009340, NM_001033450_5end |
EntrezGene: | Mnda |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.77e-15 | 6 |
muscle cell | 1.77e-15 | 6 |
myoblast | 1.77e-15 | 6 |
bone marrow macrophage | 1.38e-13 | 2 |
mesodermal cell | 2.60e-13 | 7 |
multi-potent skeletal muscle stem cell | 2.06e-10 | 9 |
bone marrow cell | 4.11e-09 | 3 |
mesenchymal stem cell of the bone marrow | 4.11e-09 | 3 |
cardiocyte | 1.21e-08 | 3 |
striated muscle cell | 1.21e-08 | 3 |
cardiac muscle cell | 1.21e-08 | 3 |
cardiac muscle myoblast | 1.21e-08 | 3 |
smooth muscle cell | 1.89e-08 | 3 |
vascular associated smooth muscle cell | 1.89e-08 | 3 |
aortic smooth muscle cell | 1.89e-08 | 3 |
smooth muscle myoblast | 1.89e-08 | 3 |
monopoietic cell | 3.21e-07 | 4 |
myeloid leukocyte | 3.21e-07 | 4 |
phagocyte | 3.21e-07 | 4 |
monocyte | 3.21e-07 | 4 |
macrophage | 3.21e-07 | 4 |
tissue-resident macrophage | 3.21e-07 | 4 |
macrophage dendritic cell progenitor | 3.21e-07 | 4 |
monoblast | 3.21e-07 | 4 |
promonocyte | 3.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.11e-11 | 32 |
skeletal muscle tissue | 2.06e-10 | 9 |
striated muscle tissue | 2.06e-10 | 9 |
muscle tissue | 2.06e-10 | 9 |
multilaminar epithelium | 2.06e-10 | 9 |
epithelial vesicle | 2.06e-10 | 9 |
musculature | 2.06e-10 | 9 |
somite | 2.06e-10 | 9 |
myotome | 2.06e-10 | 9 |
presomitic mesoderm | 2.06e-10 | 9 |
presumptive segmental plate | 2.06e-10 | 9 |
dermomyotome | 2.06e-10 | 9 |
trunk paraxial mesoderm | 2.06e-10 | 9 |
musculature of body | 2.15e-09 | 10 |
dense mesenchyme tissue | 1.47e-08 | 11 |
paraxial mesoderm | 1.47e-08 | 11 |
presumptive paraxial mesoderm | 1.47e-08 | 11 |
smooth muscle tissue | 1.89e-08 | 3 |
blood vessel smooth muscle | 1.89e-08 | 3 |
arterial system smooth muscle | 1.89e-08 | 3 |
artery smooth muscle tissue | 1.89e-08 | 3 |
aorta smooth muscle tissue | 1.89e-08 | 3 |