FFCP PHASE1:Mm9::chr17:7183242..7183261,+: Difference between revisions
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{{FFCP|EntrezGene=100037283,68195|HGNC=|MCL_coexpression_id=415|UniProt=Q9CQ01,Q5FWA0,Q9D505|association_with_transcript=33bp_to_ENSMUST00000089119,NM_026611,uc008aib.1,uc008aic.1,uc008aid.1,uc012ajm.1_5end|description=CAGE_peak_1_at_Rnaset2a_5end,CAGE_peak_1_at_Rnaset2b_5end|id=chr17:7183242..7183261,+|ontology_enrichment_celltype=CL:0000063!5.40e-33!66;CL:0000144!6.83e-21!121;CL:0000012!6.83e-21!121;CL:0000988!3.57e-19!32;CL:0002032!3.57e-19!32;CL:0000037!3.57e-19!32;CL:0000566!3.57e-19!32;CL:0000837!3.57e-19!32;CL:0002371!4.61e-19!118;CL:0000548!4.05e-17!115;CL:0000004!4.05e-17!115;CL:0000255!4.05e-17!115;CL:0002031!4.23e-17!25;CL:0002320!7.59e-16!46;CL:0000134!7.59e-16!46;CL:0000066!6.79e-15!25;CL:0002076!1.41e-14!15;CL:0000219!3.34e-14!54;CL:0000838!4.91e-13!12;CL:0000084!5.59e-12!11;CL:0000827!5.59e-12!11;CL:0000738!6.56e-12!17;CL:0002087!6.56e-12!17;CL:0000542!9.91e-12!13;CL:0000051!9.91e-12!13;CL:0000223!1.96e-11!20;CL:0000791!8.86e-11!9;CL:0000789!8.86e-11!9;CL:0002420!8.86e-11!9;CL:0002419!8.86e-11!9;CL:0000790!8.86e-11!9;CL:0000034!1.52e-10!97;CL:0000624!1.10e-09!8;CL:0000049!5.44e-09!19;CL:0002563!1.05e-08!9;CL:0002251!1.05e-08!9;CL:0000723!8.61e-08!91;CL:0000048!8.61e-08!91;CL:0000075!1.35e-07!7;CL:0000893!1.69e-07!6;CL:0002489!1.69e-07!6;CL:0000898!1.69e-07!6;CL:0000809!1.69e-07!6;CL:0000810!1.69e-07!6;CL:0000895!1.69e-07!6;CL:0000808!1.69e-07!6;CL:0000894!1.69e-07!6;CL:0000806!1.69e-07!6;CL:0000807!1.69e-07!6;CL:0000805!1.69e-07!6;CL:0002425!1.69e-07!6;CL:0002436!1.69e-07!6;CL:0002427!1.69e-07!6;CL:0002428!1.69e-07!6;CL:0002429!1.69e-07!6;CL:0002433!1.69e-07!6;CL:0002431!1.69e-07!6;CL:0002432!1.69e-07!6;CL:0000763!5.27e-07!16;CL:0000239!7.50e-07!6;CL:0000677!7.50e-07!6;CL:0000212!7.50e-07!6;CL:0000584!7.50e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,2.29e-21,32;CL:0002032,2.29e-21,32;CL:0000037,2.29e-21,32;CL:0000837,2.29e-21,32;CL:0000066,6.85e-19,25;CL:0002320,1.10e-18,46;CL:0000134,1.10e-18,46;CL:0002031,2.23e-18,25;CL:0002076,5.60e-18,15;CL:0000219,3.10e-17,54;CL:0000223,1.67e-14,20;CL:0000838,3.93e-14,12;CL:0000034,8.92e-14,97;CL:0000738,1.84e-13,17;CL:0002087,1.84e-13,17;CL:0000791,3.47e-13,9;CL:0000789,3.47e-13,9;CL:0002420,3.47e-13,9;CL:0002419,3.47e-13,9;CL:0000790,3.47e-13,9;CL:0000084,8.15e-13,11;CL:0000827,8.15e-13,11;CL:0000542,8.32e-13,13;CL:0000051,8.32e-13,13;CL:0000624,8.34e-12,8;CL:0002563,1.43e-10,9;CL:0002251,1.43e-10,9;CL:0000723,3.50e-10,91;CL:0000048,3.50e-10,91;CL:0000049,4.75e-10,19;CL:0000075,3.55e-09,7;CL:0000893,4.70e-09,6;CL:0002489,4.70e-09,6;CL:0000898,4.70e-09,6;CL:0000809,4.70e-09,6;CL:0000810,4.70e-09,6;CL:0000895,4.70e-09,6;CL:0000808,4.70e-09,6;CL:0000894,4.70e-09,6;CL:0000806,4.70e-09,6;CL:0000807,4.70e-09,6;CL:0000805,4.70e-09,6;CL:0002425,4.70e-09,6;CL:0002436,4.70e-09,6;CL:0002427,4.70e-09,6;CL:0002428,4.70e-09,6;CL:0002429,4.70e-09,6;CL:0002433,4.70e-09,6;CL:0002431,4.70e-09,6;CL:0002432,4.70e-09,6;CL:0000239,3.06e-08,6;CL:0000677,3.06e-08,6;CL:0000584,3.06e-08,6;CL:0000763,1.30e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.59e-16!46;UBERON:0000344!2.05e-12!15;UBERON:0001242!3.68e-10!13;UBERON:0000060!3.68e-10!13;UBERON:0001262!3.68e-10!13;UBERON:0004786!3.68e-10!13;UBERON:0000485!5.30e-10!11;UBERON:0003350!1.05e-08!9;UBERON:0004808!1.05e-08!9;UBERON:0001277!1.05e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.10e-18,46;UBERON:0000344,2.14e-15,15;UBERON:0001242,1.51e-12,13;UBERON:0001262,1.51e-12,13;UBERON:0004786,1.51e-12,13;UBERON:0000485,3.31e-12,11;UBERON:0003350,1.43e-10,9;UBERON:0004808,1.43e-10,9;UBERON:0001277,1.43e-10,9;UBERON:0004923,3.11e-08,24;UBERON:0002193,7.86e-08,48;UBERON:0002405,7.86e-08,48;UBERON:0000490,7.31e-07,66|phase1_expression=2.24208385946712,2.79180326111489,2.27499619694768,34.1784558776718,36.5653882860833,5.20425742926858,22.1932008565749,28.019761186822,16.3314917695933,13.8098070529976,16.0944890131975,8.85470964848234,28.0769197087177,18.1834437031515,0,8.90891176515234,3.49780939064073,19.874116417569,16.3166175990829,19.9463136345074,0,0.0992909512008853,12.5375898786689,28.6386436800198,31.6584807872695,1.14846392823004,6.8921919385452,4.74036711908956,25.0830913682414,6.30075324399827,4.6563407237614,0.635030673459631,0,15.8481681015439,2.3108129580102,5.15327400611326,2.6542016314108,4.18531630736908,5.4693474116666,4.18818995179039,4.1176204162171,5.46436387966757,8.25367600152961,0,0,0,0,0,0,0,0,0,19.2949996966397,19.5847778343063,21.5100031451177,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61929779332423,7.17929821014462,17.3918693221007,51.6254326188832,0,0,0,0,0,0,6.49465011507172,9.18682893726885,5.21120653173718,15.3991772897181,17.8363667794652,28.4426681261332,9.30911476348221,10.1343946190039,9.0994400102661,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,2.75574786363617,8.39863823390771,3.04968544975355,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,4.91549231119264,9.52187256324446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,60.3165135757089,45.1441717569529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86976272993241,2.6590775941495,2.76399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,2.88581739386284,5.9211145362254,6.54750003819906,0,0,0.183151624267265,0.214368379079066,0,0,0,0,2.57779773515531,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p1@Rnaset2a,p1@Rnaset2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100037283,68195 | |||
|HGNC= | |||
|MCL_coexpression_id=415 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQ01,Q5FWA0,Q9D505 | |||
|association_with_transcript=33bp_to_ENSMUST00000089119,NM_026611,uc008aib.1,uc008aic.1,uc008aid.1,uc012ajm.1_5end | |||
|cluster_id=chr17:7183242..7183261,+ | |||
|description=CAGE_peak_1_at_Rnaset2a_5end,CAGE_peak_1_at_Rnaset2b_5end | |||
|id=chr17:7183242..7183261,+ | |||
|ontology_enrichment_celltype=CL:0000063!5.40e-33!66;CL:0000144!6.83e-21!121;CL:0000012!6.83e-21!121;CL:0000988!3.57e-19!32;CL:0002032!3.57e-19!32;CL:0000037!3.57e-19!32;CL:0000566!3.57e-19!32;CL:0000837!3.57e-19!32;CL:0002371!4.61e-19!118;CL:0000548!4.05e-17!115;CL:0000004!4.05e-17!115;CL:0000255!4.05e-17!115;CL:0002031!4.23e-17!25;CL:0002320!7.59e-16!46;CL:0000134!7.59e-16!46;CL:0000066!6.79e-15!25;CL:0002076!1.41e-14!15;CL:0000219!3.34e-14!54;CL:0000838!4.91e-13!12;CL:0000084!5.59e-12!11;CL:0000827!5.59e-12!11;CL:0000738!6.56e-12!17;CL:0002087!6.56e-12!17;CL:0000542!9.91e-12!13;CL:0000051!9.91e-12!13;CL:0000223!1.96e-11!20;CL:0000791!8.86e-11!9;CL:0000789!8.86e-11!9;CL:0002420!8.86e-11!9;CL:0002419!8.86e-11!9;CL:0000790!8.86e-11!9;CL:0000034!1.52e-10!97;CL:0000624!1.10e-09!8;CL:0000049!5.44e-09!19;CL:0002563!1.05e-08!9;CL:0002251!1.05e-08!9;CL:0000723!8.61e-08!91;CL:0000048!8.61e-08!91;CL:0000075!1.35e-07!7;CL:0000893!1.69e-07!6;CL:0002489!1.69e-07!6;CL:0000898!1.69e-07!6;CL:0000809!1.69e-07!6;CL:0000810!1.69e-07!6;CL:0000895!1.69e-07!6;CL:0000808!1.69e-07!6;CL:0000894!1.69e-07!6;CL:0000806!1.69e-07!6;CL:0000807!1.69e-07!6;CL:0000805!1.69e-07!6;CL:0002425!1.69e-07!6;CL:0002436!1.69e-07!6;CL:0002427!1.69e-07!6;CL:0002428!1.69e-07!6;CL:0002429!1.69e-07!6;CL:0002433!1.69e-07!6;CL:0002431!1.69e-07!6;CL:0002432!1.69e-07!6;CL:0000763!5.27e-07!16;CL:0000239!7.50e-07!6;CL:0000677!7.50e-07!6;CL:0000212!7.50e-07!6;CL:0000584!7.50e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.29e-21,32;CL:0002032,2.29e-21,32;CL:0000037,2.29e-21,32;CL:0000837,2.29e-21,32;CL:0000066,6.85e-19,25;CL:0002320,1.10e-18,46;CL:0000134,1.10e-18,46;CL:0002031,2.23e-18,25;CL:0002076,5.60e-18,15;CL:0000219,3.10e-17,54;CL:0000223,1.67e-14,20;CL:0000838,3.93e-14,12;CL:0000034,8.92e-14,97;CL:0000738,1.84e-13,17;CL:0002087,1.84e-13,17;CL:0000791,3.47e-13,9;CL:0000789,3.47e-13,9;CL:0002420,3.47e-13,9;CL:0002419,3.47e-13,9;CL:0000790,3.47e-13,9;CL:0000084,8.15e-13,11;CL:0000827,8.15e-13,11;CL:0000542,8.32e-13,13;CL:0000051,8.32e-13,13;CL:0000624,8.34e-12,8;CL:0002563,1.43e-10,9;CL:0002251,1.43e-10,9;CL:0000723,3.50e-10,91;CL:0000048,3.50e-10,91;CL:0000049,4.75e-10,19;CL:0000075,3.55e-09,7;CL:0000893,4.70e-09,6;CL:0002489,4.70e-09,6;CL:0000898,4.70e-09,6;CL:0000809,4.70e-09,6;CL:0000810,4.70e-09,6;CL:0000895,4.70e-09,6;CL:0000808,4.70e-09,6;CL:0000894,4.70e-09,6;CL:0000806,4.70e-09,6;CL:0000807,4.70e-09,6;CL:0000805,4.70e-09,6;CL:0002425,4.70e-09,6;CL:0002436,4.70e-09,6;CL:0002427,4.70e-09,6;CL:0002428,4.70e-09,6;CL:0002429,4.70e-09,6;CL:0002433,4.70e-09,6;CL:0002431,4.70e-09,6;CL:0002432,4.70e-09,6;CL:0000239,3.06e-08,6;CL:0000677,3.06e-08,6;CL:0000584,3.06e-08,6;CL:0000763,1.30e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.59e-16!46;UBERON:0000344!2.05e-12!15;UBERON:0001242!3.68e-10!13;UBERON:0000060!3.68e-10!13;UBERON:0001262!3.68e-10!13;UBERON:0004786!3.68e-10!13;UBERON:0000485!5.30e-10!11;UBERON:0003350!1.05e-08!9;UBERON:0004808!1.05e-08!9;UBERON:0001277!1.05e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.10e-18,46;UBERON:0000344,2.14e-15,15;UBERON:0001242,1.51e-12,13;UBERON:0001262,1.51e-12,13;UBERON:0004786,1.51e-12,13;UBERON:0000485,3.31e-12,11;UBERON:0003350,1.43e-10,9;UBERON:0004808,1.43e-10,9;UBERON:0001277,1.43e-10,9;UBERON:0004923,3.11e-08,24;UBERON:0002193,7.86e-08,48;UBERON:0002405,7.86e-08,48;UBERON:0000490,7.31e-07,66 | |||
|phase1_expression=2.24208385946712,2.79180326111489,2.27499619694768,34.1784558776718,36.5653882860833,5.20425742926858,22.1932008565749,28.019761186822,16.3314917695933,13.8098070529976,16.0944890131975,8.85470964848234,28.0769197087177,18.1834437031515,0,8.90891176515234,3.49780939064073,19.874116417569,16.3166175990829,19.9463136345074,0,0.0992909512008853,12.5375898786689,28.6386436800198,31.6584807872695,1.14846392823004,6.8921919385452,4.74036711908956,25.0830913682414,6.30075324399827,4.6563407237614,0.635030673459631,0,15.8481681015439,2.3108129580102,5.15327400611326,2.6542016314108,4.18531630736908,5.4693474116666,4.18818995179039,4.1176204162171,5.46436387966757,8.25367600152961,0,0,0,0,0,0,0,0,0,19.2949996966397,19.5847778343063,21.5100031451177,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61929779332423,7.17929821014462,17.3918693221007,51.6254326188832,0,0,0,0,0,0,6.49465011507172,9.18682893726885,5.21120653173718,15.3991772897181,17.8363667794652,28.4426681261332,9.30911476348221,10.1343946190039,9.0994400102661,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,2.75574786363617,8.39863823390771,3.04968544975355,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,4.91549231119264,9.52187256324446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,60.3165135757089,45.1441717569529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86976272993241,2.6590775941495,2.76399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,2.88581739386284,5.9211145362254,6.54750003819906,0,0,0.183151624267265,0.214368379079066,0,0,0,0,2.57779773515531,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p1@Rnaset2a,p1@Rnaset2b | |||
}} |
Latest revision as of 20:40, 26 September 2015
Short description: | p1@Rnaset2a, p1@Rnaset2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnaset2a_5end, CAGE_peak_1_at_Rnaset2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:415 |
Association with transcript: | 33bp_to_ENSMUST00000089119, NM_026611, uc008aib.1, uc008aic.1, uc008aid.1, uc012ajm.1_5end |
EntrezGene: | 100037283,68195 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.10e-18 | 46 |
mucosa | 2.14e-15 | 15 |
intestinal mucosa | 1.51e-12 | 13 |
wall of intestine | 1.51e-12 | 13 |
gastrointestinal system mucosa | 1.51e-12 | 13 |
simple columnar epithelium | 3.31e-12 | 11 |
epithelium of mucosa | 1.43e-10 | 9 |
gastrointestinal system epithelium | 1.43e-10 | 9 |
intestinal epithelium | 1.43e-10 | 9 |
organ component layer | 3.11e-08 | 24 |
hemolymphoid system | 7.86e-08 | 48 |
immune system | 7.86e-08 | 48 |
unilaminar epithelium | 7.31e-07 | 66 |