FFCP PHASE1:Mm9::chr12:80231787..80231803,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:80231787..80231803,+
|short_description=p1@Arg2
|description=CAGE_peak_1_at_Arg2_5end
|association_with_transcript=12bp_to_NM_009705,uc007nzv.2_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11847 | |EntrezGene=11847 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=O08691 | |UniProt=O08691 | ||
|association_with_transcript=12bp_to_NM_009705,uc007nzv.2_5end | |||
|cluster_id=chr12:80231787..80231803,+ | |||
|description=CAGE_peak_1_at_Arg2_5end | |||
|id=chr12:80231787..80231803,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.39e-07,9;CL:0002251,9.39e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.37e-10!15;UBERON:0001242!5.01e-09!13;UBERON:0000060!5.01e-09!13;UBERON:0001262!5.01e-09!13;UBERON:0004786!5.01e-09!13;UBERON:0000160!3.16e-07!43;UBERON:0004923!4.67e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-10,15;UBERON:0001242,3.07e-09,13;UBERON:0001262,3.07e-09,13;UBERON:0004786,3.07e-09,13;UBERON:0000160,7.27e-09,31;UBERON:0003350,9.39e-07,9;UBERON:0004808,9.39e-07,9;UBERON:0001277,9.39e-07,9;UBERON:0000485,9.74e-07,11 | |||
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| ||
|short_description=p1@Arg2 | |||
}} | }} |
Latest revision as of 20:34, 26 September 2015
Short description: | p1@Arg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 12bp_to_NM_009705, uc007nzv.2_5end |
EntrezGene: | Arg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.39e-07 | 9 |
epithelial cell of alimentary canal | 9.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.33e-10 | 15 |
intestinal mucosa | 3.07e-09 | 13 |
wall of intestine | 3.07e-09 | 13 |
gastrointestinal system mucosa | 3.07e-09 | 13 |
intestine | 7.27e-09 | 31 |
epithelium of mucosa | 9.39e-07 | 9 |
gastrointestinal system epithelium | 9.39e-07 | 9 |
intestinal epithelium | 9.39e-07 | 9 |
simple columnar epithelium | 9.74e-07 | 11 |