FFCP PHASE1:Mm9::chr15:52543934..52543939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69790 | |EntrezGene=69790 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQI9 | |UniProt=Q9CQI9 | ||
|association_with_transcript=-60bp_to_ENSMUST00000037115,NM_027212,uc007vrg.1_5end | |association_with_transcript=-60bp_to_ENSMUST00000037115,NM_027212,uc007vrg.1_5end | ||
|cluster_id=chr15:52543934..52543939,+ | |||
|description=CAGE_peak_4_at_Med30_5end | |description=CAGE_peak_4_at_Med30_5end | ||
|id=chr15:52543934..52543939,+ | |id=chr15:52543934..52543939,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.88e-08,23;CL:0000337,2.88e-08,23;CL:0000120,4.68e-08,3;CL:0002611,4.21e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.56e-10!71;UBERON:0003075!2.56e-10!71;UBERON:0007284!2.56e-10!71;UBERON:0004121!2.69e-09!102;UBERON:0000924!2.69e-09!102;UBERON:0006601!2.69e-09!102;UBERON:0001017!5.45e-09!73;UBERON:0005743!5.45e-09!73;UBERON:0000073!1.02e-08!75;UBERON:0001016!1.02e-08!75;UBERON:0001049!1.39e-08!52;UBERON:0005068!1.39e-08!52;UBERON:0006241!1.39e-08!52;UBERON:0007135!1.39e-08!52;UBERON:0002020!4.05e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.86e-10,7;UBERON:0006858,1.86e-10,7;UBERON:0001948,8.16e-10,5;UBERON:0002315,8.16e-10,5;UBERON:0003064,2.44e-09,14;UBERON:0001017,3.05e-08,73;UBERON:0002240,3.57e-08,6;UBERON:0005174,3.57e-08,6;UBERON:0001137,3.57e-08,6;UBERON:0001016,6.39e-08,75;UBERON:0002256,4.21e-07,2 | |||
|phase1_expression=0.80074423552397,1.04692622291808,0,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.68487187290202,0.558405112967355,0.342401459862411,0.174840804837995,0,0.607425802169478,1.39912375625629,0.315462165358238,0.274228867211478,0,0.255129870453209,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0.443461021310609,0,0,0,0.577703239502549,0.664938581433969,0,0.418531630736908,2.3440060335714,0.523523743973798,0,0.683045484958446,0,0.629484089877886,0.709638518536602,0.550640256485045,0.782391344348039,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,1.01158230429799,1.05798195854407,1.26766280701236,0.677689064138264,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.405017814995072,0.420649922702764,1.71390590642282,1.98781686856452,0.857435594504678,0.766763768145891,0,0,0.893811366596314,1.38245879930619,0.791317726381163,0.914876436024097,0,1.3959149950069,0.56276261003168,0.61119299110724,0.883885756421003,2.42031857358475,1.3047961207771,0.302904773332736,0.226714680320357,0,0,0.679971333707751,0.539703191637817,0,0.896053774194671,0.280888840263504,0.681721290312231,0.259786004602869,0.35333957451034,0.563373679106722,0,0,0,0.649473123033642,1.52015919285059,0.505524445014783,0.45673551887624,0.258937883647172,1.7813056687779,0.867426633830679,1.52232739156071,1.61430848079241,1.65794904607885,1.41106448562846,0.879666139307728,0,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0.41889341362691,0,0,0,0.127070227073065,1.19832511523858,0.915001205637253,0.753926112677186,0.173824320192276,0.255715457330331,0.83115217823824,1.1356888414743,0.101839363850316,1.11966273549084,2.0217820674694,0.841767423545896,0.260240885925407,0,0.180062129805349,0,0.748401490664606,0.2562274405697,0.468508622798644,0.776110112217047,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0.703578179943289,0.36012412292203,0.710234206755631,0.787056926989615,0.308534225774757,0.697601834251224,0,0.583826711835847,0.329119699826961,0.32833492815819,1.21603214318784,0.877199924551994,0.439100230582101,0.536825675041487,0.630869845692382,0.720332286654991,0,0.528901133327089,0.853153002140936,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.754005626400808,0.198956472041151,0.38992817423824,0,0.648414149624083,0.597423819763102,0.569003702859245,0.228497025219458,0,0,0.387904974335251,0,0.569128834118316,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.488894929326078,0,0.234690248288502,0.167506257441816,0.714130922658041,0,0.157635144106191,0.8858587585951,0,0.163863314715738,0.690739927463582,0,0,0.54390568381871,0,0,0.642202359951168,0.820481806145422,0.655739781506702,0.504941854408746,0.631016438832513,0,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0,0.141940085208269,0,0.325773918707152,0.164970122972535,1.32745138339963,0.242780636154981,0.604647113929502,0.754420319023592,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.646793418913773,0,0,0.356737635204141,0.164549020602121,0,0.938686832254841,0.21183207086382,0.441056796109924,0.65954501176592,0.161464426695906,0.603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.927126510052548,0.170870880797853,0.412773735926445,0.185194527369712,0,0.27338845544205,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,0,0.216010681643603,0,0.436725127492355,0.539457385539283,0.743881101528023,0,0.388844919875379,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0.483168241652012,0.288030006257865,0,1.01362607645082,0.410843828659309,0.51968329191118,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.350630706544707,0,0,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,1.14579102687879,1.3748254587495,0.685082519770642,0,2.70009000092722,1.35096360967266,0.906284817968409,0.51776031175182,0.207574695168353,0.399024873401031,0.170733605754134,0.729320151204882,0.628839487883947,0,0.666740183404846,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.468207537349412,0.192075457214608,0.516919220600519,0.476293691283074,0.115884325944855,0.578727661391115,1.64834360321323,0.735994600671987,0,0.887379030796687,0.238436189947321,0.290692833264657,0.376437521661322,0.42307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| |phase1_expression=0.80074423552397,1.04692622291808,0,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.68487187290202,0.558405112967355,0.342401459862411,0.174840804837995,0,0.607425802169478,1.39912375625629,0.315462165358238,0.274228867211478,0,0.255129870453209,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0.443461021310609,0,0,0,0.577703239502549,0.664938581433969,0,0.418531630736908,2.3440060335714,0.523523743973798,0,0.683045484958446,0,0.629484089877886,0.709638518536602,0.550640256485045,0.782391344348039,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,1.01158230429799,1.05798195854407,1.26766280701236,0.677689064138264,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.405017814995072,0.420649922702764,1.71390590642282,1.98781686856452,0.857435594504678,0.766763768145891,0,0,0.893811366596314,1.38245879930619,0.791317726381163,0.914876436024097,0,1.3959149950069,0.56276261003168,0.61119299110724,0.883885756421003,2.42031857358475,1.3047961207771,0.302904773332736,0.226714680320357,0,0,0.679971333707751,0.539703191637817,0,0.896053774194671,0.280888840263504,0.681721290312231,0.259786004602869,0.35333957451034,0.563373679106722,0,0,0,0.649473123033642,1.52015919285059,0.505524445014783,0.45673551887624,0.258937883647172,1.7813056687779,0.867426633830679,1.52232739156071,1.61430848079241,1.65794904607885,1.41106448562846,0.879666139307728,0,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0.41889341362691,0,0,0,0.127070227073065,1.19832511523858,0.915001205637253,0.753926112677186,0.173824320192276,0.255715457330331,0.83115217823824,1.1356888414743,0.101839363850316,1.11966273549084,2.0217820674694,0.841767423545896,0.260240885925407,0,0.180062129805349,0,0.748401490664606,0.2562274405697,0.468508622798644,0.776110112217047,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0.703578179943289,0.36012412292203,0.710234206755631,0.787056926989615,0.308534225774757,0.697601834251224,0,0.583826711835847,0.329119699826961,0.32833492815819,1.21603214318784,0.877199924551994,0.439100230582101,0.536825675041487,0.630869845692382,0.720332286654991,0,0.528901133327089,0.853153002140936,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.754005626400808,0.198956472041151,0.38992817423824,0,0.648414149624083,0.597423819763102,0.569003702859245,0.228497025219458,0,0,0.387904974335251,0,0.569128834118316,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.488894929326078,0,0.234690248288502,0.167506257441816,0.714130922658041,0,0.157635144106191,0.8858587585951,0,0.163863314715738,0.690739927463582,0,0,0.54390568381871,0,0,0.642202359951168,0.820481806145422,0.655739781506702,0.504941854408746,0.631016438832513,0,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0,0.141940085208269,0,0.325773918707152,0.164970122972535,1.32745138339963,0.242780636154981,0.604647113929502,0.754420319023592,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.646793418913773,0,0,0.356737635204141,0.164549020602121,0,0.938686832254841,0.21183207086382,0.441056796109924,0.65954501176592,0.161464426695906,0.603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.927126510052548,0.170870880797853,0.412773735926445,0.185194527369712,0,0.27338845544205,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,0,0.216010681643603,0,0.436725127492355,0.539457385539283,0.743881101528023,0,0.388844919875379,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0.483168241652012,0.288030006257865,0,1.01362607645082,0.410843828659309,0.51968329191118,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.350630706544707,0,0,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,1.14579102687879,1.3748254587495,0.685082519770642,0,2.70009000092722,1.35096360967266,0.906284817968409,0.51776031175182,0.207574695168353,0.399024873401031,0.170733605754134,0.729320151204882,0.628839487883947,0,0.666740183404846,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.468207537349412,0.192075457214608,0.516919220600519,0.476293691283074,0.115884325944855,0.578727661391115,1.64834360321323,0.735994600671987,0,0.887379030796687,0.238436189947321,0.290692833264657,0.376437521661322,0.42307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| ||
|short_description=p4@Med30 | |short_description=p4@Med30 | ||
}} | }} |
Latest revision as of 19:50, 26 September 2015
Short description: | p4@Med30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Med30_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENSMUST00000037115, NM_027212, uc007vrg.1_5end |
EntrezGene: | Med30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.88e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.88e-08 | 23 |
granule cell | 4.68e-08 | 3 |
neuron of the dorsal spinal cord | 4.21e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.86e-10 | 7 |
adrenal/interrenal gland | 1.86e-10 | 7 |
regional part of spinal cord | 8.16e-10 | 5 |
gray matter of spinal cord | 8.16e-10 | 5 |
intermediate mesoderm | 2.44e-09 | 14 |
central nervous system | 3.05e-08 | 73 |
spinal cord | 3.57e-08 | 6 |
dorsal region element | 3.57e-08 | 6 |
dorsum | 3.57e-08 | 6 |
nervous system | 6.39e-08 | 75 |
dorsal horn of spinal cord | 4.21e-07 | 2 |