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FFCP PHASE1:Mm9::chr4:154335024..154335039,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15208
|EntrezGene=15208
|HGNC=
|HGNC=
|MCL_coexpression_id=763
|TSSclassifier=NA
|UniProt=P70120,Q499J8
|UniProt=P70120,Q499J8
|association_with_transcript=0bp_to_ENSMUST00000049621,NM_010419,uc008wck.1_5end
|association_with_transcript=0bp_to_ENSMUST00000049621,NM_010419,uc008wck.1_5end
|cluster_id=chr4:154335024..154335039,+
|description=CAGE_peak_1_at_Hes5_5end
|description=CAGE_peak_1_at_Hes5_5end
|id=chr4:154335024..154335039,+
|id=chr4:154335024..154335039,+
|ontology_enrichment_celltype=CL:0000117!5.27e-15!23;CL:0000337!5.27e-15!23;CL:0000540!3.08e-12!33;CL:0000047!3.08e-12!33;CL:0000031!3.08e-12!33;CL:0000404!3.08e-12!33;CL:0000221!7.37e-12!44;CL:0000133!7.37e-12!44;CL:0002319!3.11e-11!43;CL:0000393!3.65e-08!39;CL:0000211!3.65e-08!39;CL:0000055!1.85e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-19,23;CL:0000337,5.96e-19,23;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0000221,1.70e-11,44;CL:0000133,1.70e-11,44;CL:0002319,9.12e-11,43;CL:0000393,4.23e-09,39;CL:0000211,4.23e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.74e-25!63;UBERON:0002346!7.93e-25!71;UBERON:0003075!7.93e-25!71;UBERON:0007284!7.93e-25!71;UBERON:0001017!2.34e-24!73;UBERON:0005743!2.34e-24!73;UBERON:0004121!2.03e-23!102;UBERON:0000924!2.03e-23!102;UBERON:0006601!2.03e-23!102;UBERON:0003056!2.55e-23!49;UBERON:0000073!8.41e-23!75;UBERON:0001016!8.41e-23!75;UBERON:0001049!2.55e-21!52;UBERON:0005068!2.55e-21!52;UBERON:0006241!2.55e-21!52;UBERON:0007135!2.55e-21!52;UBERON:0000955!4.35e-20!50;UBERON:0006238!4.35e-20!50;UBERON:0002616!1.80e-19!49;UBERON:0002020!1.57e-18!34;UBERON:0003080!4.68e-18!40;UBERON:0002780!1.37e-17!39;UBERON:0001890!1.37e-17!39;UBERON:0006240!1.37e-17!39;UBERON:0002791!1.69e-15!29;UBERON:0003528!1.69e-15!29;UBERON:0001893!1.69e-15!29;UBERON:0007811!2.75e-13!86;UBERON:0000153!3.43e-12!94;UBERON:0000956!9.24e-11!21;UBERON:0001869!9.24e-11!21;UBERON:0000203!9.24e-11!21;UBERON:0002619!1.88e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.64e-27,64;UBERON:0003075,1.64e-27,64;UBERON:0007284,1.64e-27,64;UBERON:0003056,1.96e-25,49;UBERON:0010371,2.12e-24,73;UBERON:0004121,2.33e-24,95;UBERON:0000924,2.33e-24,95;UBERON:0006601,2.33e-24,95;UBERON:0000073,3.46e-24,54;UBERON:0001017,3.76e-24,73;UBERON:0001016,6.09e-23,75;UBERON:0001049,1.37e-22,52;UBERON:0005068,1.37e-22,52;UBERON:0006241,1.37e-22,52;UBERON:0007135,1.37e-22,52;UBERON:0002020,3.72e-22,34;UBERON:0003080,2.33e-19,40;UBERON:0000955,2.68e-19,47;UBERON:0006238,2.68e-19,47;UBERON:0002780,9.05e-19,39;UBERON:0001890,9.05e-19,39;UBERON:0006240,9.05e-19,39;UBERON:0002616,1.48e-18,46;UBERON:0003528,2.89e-18,29;UBERON:0002791,2.89e-18,29;UBERON:0001893,2.89e-18,29;UBERON:0010314,4.00e-15,92;UBERON:0000956,3.25e-12,21;UBERON:0001869,3.25e-12,21;UBERON:0000203,3.25e-12,21;UBERON:0002619,2.73e-09,17;UBERON:0000020,1.76e-07,12;UBERON:0001032,1.76e-07,12;UBERON:0004456,1.76e-07,12;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8;UBERON:0002021,2.35e-07,10;UBERON:0000411,2.35e-07,10;UBERON:0001950,2.35e-07,10;UBERON:0000970,6.70e-07,9;UBERON:0000019,6.70e-07,9;UBERON:0000047,6.70e-07,9;UBERON:0010312,6.70e-07,9;UBERON:0004088,6.70e-07,9;UBERON:0002104,6.70e-07,9;UBERON:0001456,6.70e-07,9;UBERON:0003072,6.70e-07,9;UBERON:0004128,6.70e-07,9;UBERON:0003071,6.70e-07,9
|phase1_expression=18.7374151112609,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,2.34064526321993,0,0.159544317990673,0,0,0.666219523631325,0.202475267389826,0,2.5236973228659,3.42786084014347,1.27316895539409,1.27564935226605,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,3.69038872550742,15.8481681015439,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,11.9913836009246,0.439372365468944,0.194429899074283,1.95980990275508,0,1.17447824240415,0,0,0,0,0,56.6486090406874,44.9642332381228,70.3552857891859,0.677689064138264,0.889294796111139,0,0,0,5.09320187881288,9.98967593836042,31.0031940802348,25.7861342213529,26.2906201689228,13.9968982357864,15.4607978666129,43.9741969181685,29.3287141315803,45.960939330501,8.8092704799511,9.44886301830389,9.67721159514334,29.6744147392936,20.4017445233374,34.9011958273029,10.3297709630511,19.6966913511088,15.4326230254578,26.5165726926301,20.6438937158699,27.4007185363192,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,46.1966416867512,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,9.13722900369418,16.9275223042892,29.5287727465231,10.7771078519211,9.71718737855256,11.2205544062162,14.9261962022337,0,0.248813941220186,0,0.210441855886474,38.645771559923,138.630968973384,99.7544199121635,92.2313485154576,135.052450815386,119.017646144625,122.749259173245,1.81092359517311,0,0.189106080167819,0,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0,0,0,9.04246778825747,32.929475961371,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,3.41402221715547,3.65595240351132,4.50830942692322,1.83286195060783,1.93952487167626,0.420814919341911,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.49541651965817,4.57125577709592,0,0,1.89304931649754,0.390438744296638,0.646270193198397,0,0.668396022247182,0,0,0.876767573733936,0.790575555893047,19.6006003017302,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,24.4883087882582,10.3486947026204,2.14337035031592,0.354680467284547,1.24858172321449,0.987294123612726,3.04464949114599,0,0,0,0.16488625294148,0.645857706783622,0.603129249281559,0.238744688006273,0,0.291480836629851,2.22510362412612,1.53783792718067,0.206386867963223,0,0.188368457004691,0.683471138605126,0.915112692826091,0.169978429993855,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.418176592028937,0.655087691238533,0,0,0,0,0,0,1.64468200648377,2.81279433777066,1.55560950675238,2.71235629303235,2.53434188236167,1.40828686374905,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,11.9684561491866,15.4681788628637,15.8104927756193,8.90607275701835,14.3524840504043,15.5255175053315,9.00642406448441,6.34399372577886,12.9440077937955,49.0914154073156,39.5034624667021,21.0002335077585,5.34834777550247,6.07878171621149,5.69914876195044,4.88942801163553,5.76898160268904,6.4183841918363,6.82282471762253,4.30914809813408,5.47016390019621,4.49479235855436,5.76226371643823,4.59483751644906,5.23923060411381,4.40360438590451,5.98018583437486,3.70877310722976,3.53277408322554,2.74295401908332,3.19456451086807,4.05341522910446,4.94177816549917,3.3879376949519,4.14611578669215,4.39027134894654,2.10455769150274,4.07412341537585,4.48913817326191,4.38949567059444,6.2057823896605,3.6830793885272,3.87342102964915,3.47231899766054,13.2399606307111,3.50897412668113,4.51229213501426,0.382576664137687,0.661774257358546,0.463735671240843
|phase1_expression=18.7374151112609,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,2.34064526321993,0,0.159544317990673,0,0,0.666219523631325,0.202475267389826,0,2.5236973228659,3.42786084014347,1.27316895539409,1.27564935226605,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,3.69038872550742,15.8481681015439,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,11.9913836009246,0.439372365468944,0.194429899074283,1.95980990275508,0,1.17447824240415,0,0,0,0,0,56.6486090406874,44.9642332381228,70.3552857891859,0.677689064138264,0.889294796111139,0,0,0,5.09320187881288,9.98967593836042,31.0031940802348,25.7861342213529,26.2906201689228,13.9968982357864,15.4607978666129,43.9741969181685,29.3287141315803,45.960939330501,8.8092704799511,9.44886301830389,9.67721159514334,29.6744147392936,20.4017445233374,34.9011958273029,10.3297709630511,19.6966913511088,15.4326230254578,26.5165726926301,20.6438937158699,27.4007185363192,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,46.1966416867512,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,9.13722900369418,16.9275223042892,29.5287727465231,10.7771078519211,9.71718737855256,11.2205544062162,14.9261962022337,0,0.248813941220186,0,0.210441855886474,38.645771559923,138.630968973384,99.7544199121635,92.2313485154576,135.052450815386,119.017646144625,122.749259173245,1.81092359517311,0,0.189106080167819,0,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0,0,0,9.04246778825747,32.929475961371,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,3.41402221715547,3.65595240351132,4.50830942692322,1.83286195060783,1.93952487167626,0.420814919341911,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.49541651965817,4.57125577709592,0,0,1.89304931649754,0.390438744296638,0.646270193198397,0,0.668396022247182,0,0,0.876767573733936,0.790575555893047,19.6006003017302,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,24.4883087882582,10.3486947026204,2.14337035031592,0.354680467284547,1.24858172321449,0.987294123612726,3.04464949114599,0,0,0,0.16488625294148,0.645857706783622,0.603129249281559,0.238744688006273,0,0.291480836629851,2.22510362412612,1.53783792718067,0.206386867963223,0,0.188368457004691,0.683471138605126,0.915112692826091,0.169978429993855,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.418176592028937,0.655087691238533,0,0,0,0,0,0,1.64468200648377,2.81279433777066,1.55560950675238,2.71235629303235,2.53434188236167,1.40828686374905,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,11.9684561491866,15.4681788628637,15.8104927756193,8.90607275701835,14.3524840504043,15.5255175053315,9.00642406448441,6.34399372577886,12.9440077937955,49.0914154073156,39.5034624667021,21.0002335077585,5.34834777550247,6.07878171621149,5.69914876195044,4.88942801163553,5.76898160268904,6.4183841918363,6.82282471762253,4.30914809813408,5.47016390019621,4.49479235855436,5.76226371643823,4.59483751644906,5.23923060411381,4.40360438590451,5.98018583437486,3.70877310722976,3.53277408322554,2.74295401908332,3.19456451086807,4.05341522910446,4.94177816549917,3.3879376949519,4.14611578669215,4.39027134894654,2.10455769150274,4.07412341537585,4.48913817326191,4.38949567059444,6.2057823896605,3.6830793885272,3.87342102964915,3.47231899766054,13.2399606307111,3.50897412668113,4.51229213501426,0.382576664137687,0.661774257358546,0.463735671240843
|short_description=p1@Hes5
|short_description=p1@Hes5
}}
}}

Latest revision as of 19:38, 26 September 2015

Short description:p1@Hes5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hes5_5end
Coexpression cluster:MCL_coexpression_mm9:763
Association with transcript: 0bp_to_ENSMUST00000049621, NM_010419, uc008wck.1_5end
EntrezGene:Hes5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hes5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C356.65
Mouse Granule cells, donor2.CNhs12357.11731-123E344.96
Mouse Granule cells, donor3.CNhs12108.11636-122C770.36
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F525.79
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.29
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D243.97
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D645.96
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.52
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.40
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G646.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F129.53
cortex, adult.CNhs10473.12-14D510.78
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C638.65
eyeball, embryo E14.CNhs10521.399-16E2138.63
eyeball, embryo E15.CNhs10593.426-16C999.75
eyeball, embryo E17.CNhs11023.1261-18D492.23
eyeball, neonate N00.CNhs11207.633-15C6135.05
eyeball, neonate N01.CNhs11140.1532-43E7119.02
eyeball, neonate N02.CNhs11205.1551-44G8122.75
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G132.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E624.49
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I849.09
whole body, embryo E12.CNhs10587.857-27C939.50
whole body, embryo E13.CNhs10512.372-23H221.00
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.96e-1923
neuroblast (sensu Vertebrata)5.96e-1923
neuron1.86e-1233
neuronal stem cell1.86e-1233
neuroblast1.86e-1233
electrically signaling cell1.86e-1233
ectodermal cell1.70e-1144
neurectodermal cell1.70e-1144
neural cell9.12e-1143
electrically responsive cell4.23e-0939
electrically active cell4.23e-0939

Uber anatomy
Ontology termp-valuen
neurectoderm1.64e-2764
neural plate1.64e-2764
presumptive neural plate1.64e-2764
pre-chordal neural plate1.96e-2549
ecto-epithelium2.12e-2473
ectoderm-derived structure2.33e-2495
ectoderm2.33e-2495
presumptive ectoderm2.33e-2495
regional part of nervous system3.46e-2454
central nervous system3.76e-2473
nervous system6.09e-2375
neural tube1.37e-2252
neural rod1.37e-2252
future spinal cord1.37e-2252
neural keel1.37e-2252
gray matter3.72e-2234
anterior neural tube2.33e-1940
brain2.68e-1947
future brain2.68e-1947
regional part of forebrain9.05e-1939
forebrain9.05e-1939
future forebrain9.05e-1939
regional part of brain1.48e-1846
brain grey matter2.89e-1829
regional part of telencephalon2.89e-1829
telencephalon2.89e-1829
structure with developmental contribution from neural crest4.00e-1592
cerebral cortex3.25e-1221
cerebral hemisphere3.25e-1221
pallium3.25e-1221
regional part of cerebral cortex2.73e-0917
sense organ1.76e-0712
sensory system1.76e-0712
entire sense organ system1.76e-0712
basal ganglion2.26e-078
nuclear complex of neuraxis2.26e-078
aggregate regional part of brain2.26e-078
collection of basal ganglia2.26e-078
cerebral subcortex2.26e-078
occipital lobe2.35e-0710
visual cortex2.35e-0710
neocortex2.35e-0710
eye6.70e-079
camera-type eye6.70e-079
simple eye6.70e-079
immature eye6.70e-079
ocular region6.70e-079
visual system6.70e-079
face6.70e-079
optic cup6.70e-079
optic vesicle6.70e-079
eye primordium6.70e-079
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