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FFCP PHASE1:Mm9::chr4:154010940..154010962,-: Difference between revisions

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{{FFCP|EntrezGene=70673|HGNC=|UniProt=A2A935,A2A930,A2A934,A2A931,A2A933|association_with_transcript=12bp_to_ENSMUST00000030902,ENSMUST00000070313,ENSMUST00000097759,ENSMUST00000105636,ENSMUST00000105637,ENSMUST00000105638,ENSMUST00000141164_5end|description=CAGE_peak_3_at_Prdm16_5end|id=chr4:154010940..154010962,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.22e-12!59;UBERON:0000160!1.36e-11!43;UBERON:0002048!1.59e-07!14;UBERON:0000117!1.59e-07!14;UBERON:0000171!1.59e-07!14;UBERON:0000170!1.59e-07!14;UBERON:0005597!1.59e-07!14;UBERON:0000118!1.59e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.51e-09,47;UBERON:0002048,3.31e-08,14;UBERON:0000117,3.31e-08,14;UBERON:0000171,3.31e-08,14;UBERON:0000170,3.31e-08,14;UBERON:0005597,3.31e-08,14;UBERON:0000118,3.31e-08,14;UBERON:0000160,5.71e-08,31|phase1_expression=1.76163731815273,4.18770489167233,1.81999695755814,5.14189159221611,5.50985302940982,3.69334398206158,3.03696432774183,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.53077922271926,0,0,1.91990907352088,1.14704640533585,0.57423196411502,1.7230479846363,1.72376986148711,0,0.252030129759931,0.221730510655305,0,0,0,9.24325183204079,4.98703936075477,7.75843553797003,0,0,0,0,0,0,0,0,0,2.34717403304412,3.05235218932625,5.4921545683618,3.4997381833371,1.67983705950435,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,1.19840044207362,3.45796474789399,4.14758449233911,4.05017814995072,2.94454945891935,0.285650984403804,1.32521124570968,2.69479758272899,3.45043695665651,1.83843757322004,2.20231761998777,0.255374676170375,0.153606533256243,0.923204014111357,0.731901148819277,1.04182674111352,0.558365998002762,0.56276261003168,0.763991238884051,0.589257170947335,0.711858403995515,0.559198337475902,2.95332153999418,4.60986516651392,8.40607017234866,0,0,0,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0.35333957451034,7.60554466794075,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,1.1418387971906,0,0.445326417194474,0.173485326766136,0,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0.247194967734374,7.80836527367523,0,1.61766849947409,0.883366073841574,0.969750506270444,1.86391761218122,0.292780797011547,0.41889341362691,3.57639877292028,0.599075622529601,0,0.254140454146129,1.04853447583376,1.83000241127451,0.628271760564322,0.173824320192276,0.511430914660661,1.0389402227978,0.973447578406546,0.407357455401265,1.49288364732112,3.28539585963777,0.420883711772948,2.21204753036596,1.60931473103431,0.900310649026746,2.10986744970001,0.748401490664606,1.2811372028485,0.843315521037559,0.776110112217047,9.91612767491074,13.0483195315795,6.51019159406611,3.28793598641362,5.83899223373756,1.39300866608867,1.4404749548556,0.199034266818493,0,0,0,3.93538967817454,3.98694301967864,1.98068267607116,5.44512891845984,6.68998387941173,4.01094493507183,3.25547522650571,4.29237442239391,5.25444040652263,4.77223564749093,4.76085645829376,5.43161023957233,6.72519942156529,2.41505126820156,3.75777972529041,1.47202963994889,1.3377599609307,8.59088835757875,6.34681359992506,0.426576501070468,1.16118335930219,2.96395161040815,5.24377164020691,4.00280478920767,1.52180500890047,6.16887780007865,1.31759163779209,3.01602250560323,3.38226002469956,3.70431765526328,7.19055526923377,2.59365659849633,3.98282546508734,1.13800740571849,2.17072173958485,3.38123207019241,1.83286195060783,2.71533482034676,3.64706263429657,4.42655759869801,2.95220295959204,3.767969468193,2.83813477020141,0.296452627087149,0.83422552858047,1.76903095601883,1.57403478669398,1.01430060694251,1.4470629585145,1.78238096246994,0.863088412352432,0.648540907100142,0.549122826376163,1.43768206527355,1.11642284300551,0.624075346229121,0.757736633841335,0.538192240565737,0.482443521363367,6.46636165583116,1.32643988239339,3.91115943460862,3.05541154395339,5.63256595892405,6.03022526790537,4.76087281772027,8.19561321002755,6.14777062014145,4.65075848262427,3.98636921643718,4.91589944147214,6.04397436530635,8.53429445630918,0,0,0,0.275936746304732,0.963303539926752,0.586058432961016,0,0.757412781613119,0,0,0,1.43381278771531,1.55959071857676,3.96307143104365,0.404810701674894,0.876767573733936,1.97643888973262,0.642642632843614,0.425820255624806,1.06839362200353,0.325773918707152,0,5.30980553359851,4.12727081463468,2.72091201268276,3.20628635585027,3.83892460745005,5.22639751504677,4.39328098385976,2.90826983582004,6.06045543254026,6.0046984007805,4.21674434299995,2.06271086496374,0.340439605753788,2.52085531643834,1.94038025674132,1.28602221018955,1.59606210278046,1.24858172321449,1.97458824722545,0,0,0,0.220528398054962,0.16488625294148,0.645857706783622,0.361877549568935,0.238744688006273,0.164140899745061,6.99554007911642,0.741701208042039,0.170870880797853,3.714963623338,2.03713980106683,0.376736914009382,0.136694227721025,0,3.73952545986482,4.3384950220334,3.31679937130617,2.86401185404534,1.10717597753397,3.04979200690273,3.02414954301044,4.59994251231831,6.55087691238533,3.37160865962052,4.05001933054146,5.23511883968059,1.42576470620972,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,0.651021924219751,0.629156066554265,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,1.36038230169127,0,0,0.167884616364078,0.965947970160952,0,0.183151624267265,0.214368379079066,2.00628841614145,0.564751842617067,0.920650473014354,1.14579102687879,0.171853182343688,0,0,0,0.900642406448441,0.453142408984205,0,1.86817225651518,5.58634822761443,1.87806966329548,1.94485373654635,1.25767897576789,1.10306105070008,1.77797382241292,2.47242068686673,1.28367683836726,1.76888048234658,2.28131369901216,1.32038438970253,2.71560371662659,2.75308155340938,2.64203157195821,2.85776214769844,1.50649623728312,2.70072908649187,2.88460130562315,1.61918812147837,3.08582327146874,3.37204031702741,1.1921809497366,2.0348498328526,1.97629698872194,1.77690676572521,1.46342378298218,1.31534855718921,2.8518863907631,1.12228454331548,1.89816028998679,2.46261205938909,0.818462086339379,2.32405261778949,2.3148793317737,1.24905288968973,1.87145286756327,1.50409737833809,1.72159498861959,0.441182838239031,1.85494268496337|short_description=p3@Prdm16}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70673
|HGNC=
|TSSclassifier=NA
|UniProt=A2A935,A2A930,A2A934,A2A931,A2A933
|association_with_transcript=12bp_to_ENSMUST00000030902,ENSMUST00000070313,ENSMUST00000097759,ENSMUST00000105636,ENSMUST00000105637,ENSMUST00000105638,ENSMUST00000141164_5end
|cluster_id=chr4:154010940..154010962,-
|description=CAGE_peak_3_at_Prdm16_5end
|id=chr4:154010940..154010962,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!3.22e-12!59;UBERON:0000160!1.36e-11!43;UBERON:0002048!1.59e-07!14;UBERON:0000117!1.59e-07!14;UBERON:0000171!1.59e-07!14;UBERON:0000170!1.59e-07!14;UBERON:0005597!1.59e-07!14;UBERON:0000118!1.59e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.51e-09,47;UBERON:0002048,3.31e-08,14;UBERON:0000117,3.31e-08,14;UBERON:0000171,3.31e-08,14;UBERON:0000170,3.31e-08,14;UBERON:0005597,3.31e-08,14;UBERON:0000118,3.31e-08,14;UBERON:0000160,5.71e-08,31
|phase1_expression=1.76163731815273,4.18770489167233,1.81999695755814,5.14189159221611,5.50985302940982,3.69334398206158,3.03696432774183,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.53077922271926,0,0,1.91990907352088,1.14704640533585,0.57423196411502,1.7230479846363,1.72376986148711,0,0.252030129759931,0.221730510655305,0,0,0,9.24325183204079,4.98703936075477,7.75843553797003,0,0,0,0,0,0,0,0,0,2.34717403304412,3.05235218932625,5.4921545683618,3.4997381833371,1.67983705950435,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,1.19840044207362,3.45796474789399,4.14758449233911,4.05017814995072,2.94454945891935,0.285650984403804,1.32521124570968,2.69479758272899,3.45043695665651,1.83843757322004,2.20231761998777,0.255374676170375,0.153606533256243,0.923204014111357,0.731901148819277,1.04182674111352,0.558365998002762,0.56276261003168,0.763991238884051,0.589257170947335,0.711858403995515,0.559198337475902,2.95332153999418,4.60986516651392,8.40607017234866,0,0,0,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0.35333957451034,7.60554466794075,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,1.1418387971906,0,0.445326417194474,0.173485326766136,0,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0.247194967734374,7.80836527367523,0,1.61766849947409,0.883366073841574,0.969750506270444,1.86391761218122,0.292780797011547,0.41889341362691,3.57639877292028,0.599075622529601,0,0.254140454146129,1.04853447583376,1.83000241127451,0.628271760564322,0.173824320192276,0.511430914660661,1.0389402227978,0.973447578406546,0.407357455401265,1.49288364732112,3.28539585963777,0.420883711772948,2.21204753036596,1.60931473103431,0.900310649026746,2.10986744970001,0.748401490664606,1.2811372028485,0.843315521037559,0.776110112217047,9.91612767491074,13.0483195315795,6.51019159406611,3.28793598641362,5.83899223373756,1.39300866608867,1.4404749548556,0.199034266818493,0,0,0,3.93538967817454,3.98694301967864,1.98068267607116,5.44512891845984,6.68998387941173,4.01094493507183,3.25547522650571,4.29237442239391,5.25444040652263,4.77223564749093,4.76085645829376,5.43161023957233,6.72519942156529,2.41505126820156,3.75777972529041,1.47202963994889,1.3377599609307,8.59088835757875,6.34681359992506,0.426576501070468,1.16118335930219,2.96395161040815,5.24377164020691,4.00280478920767,1.52180500890047,6.16887780007865,1.31759163779209,3.01602250560323,3.38226002469956,3.70431765526328,7.19055526923377,2.59365659849633,3.98282546508734,1.13800740571849,2.17072173958485,3.38123207019241,1.83286195060783,2.71533482034676,3.64706263429657,4.42655759869801,2.95220295959204,3.767969468193,2.83813477020141,0.296452627087149,0.83422552858047,1.76903095601883,1.57403478669398,1.01430060694251,1.4470629585145,1.78238096246994,0.863088412352432,0.648540907100142,0.549122826376163,1.43768206527355,1.11642284300551,0.624075346229121,0.757736633841335,0.538192240565737,0.482443521363367,6.46636165583116,1.32643988239339,3.91115943460862,3.05541154395339,5.63256595892405,6.03022526790537,4.76087281772027,8.19561321002755,6.14777062014145,4.65075848262427,3.98636921643718,4.91589944147214,6.04397436530635,8.53429445630918,0,0,0,0.275936746304732,0.963303539926752,0.586058432961016,0,0.757412781613119,0,0,0,1.43381278771531,1.55959071857676,3.96307143104365,0.404810701674894,0.876767573733936,1.97643888973262,0.642642632843614,0.425820255624806,1.06839362200353,0.325773918707152,0,5.30980553359851,4.12727081463468,2.72091201268276,3.20628635585027,3.83892460745005,5.22639751504677,4.39328098385976,2.90826983582004,6.06045543254026,6.0046984007805,4.21674434299995,2.06271086496374,0.340439605753788,2.52085531643834,1.94038025674132,1.28602221018955,1.59606210278046,1.24858172321449,1.97458824722545,0,0,0,0.220528398054962,0.16488625294148,0.645857706783622,0.361877549568935,0.238744688006273,0.164140899745061,6.99554007911642,0.741701208042039,0.170870880797853,3.714963623338,2.03713980106683,0.376736914009382,0.136694227721025,0,3.73952545986482,4.3384950220334,3.31679937130617,2.86401185404534,1.10717597753397,3.04979200690273,3.02414954301044,4.59994251231831,6.55087691238533,3.37160865962052,4.05001933054146,5.23511883968059,1.42576470620972,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,0.651021924219751,0.629156066554265,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,1.36038230169127,0,0,0.167884616364078,0.965947970160952,0,0.183151624267265,0.214368379079066,2.00628841614145,0.564751842617067,0.920650473014354,1.14579102687879,0.171853182343688,0,0,0,0.900642406448441,0.453142408984205,0,1.86817225651518,5.58634822761443,1.87806966329548,1.94485373654635,1.25767897576789,1.10306105070008,1.77797382241292,2.47242068686673,1.28367683836726,1.76888048234658,2.28131369901216,1.32038438970253,2.71560371662659,2.75308155340938,2.64203157195821,2.85776214769844,1.50649623728312,2.70072908649187,2.88460130562315,1.61918812147837,3.08582327146874,3.37204031702741,1.1921809497366,2.0348498328526,1.97629698872194,1.77690676572521,1.46342378298218,1.31534855718921,2.8518863907631,1.12228454331548,1.89816028998679,2.46261205938909,0.818462086339379,2.32405261778949,2.3148793317737,1.24905288968973,1.87145286756327,1.50409737833809,1.72159498861959,0.441182838239031,1.85494268496337
|short_description=p3@Prdm16
}}

Latest revision as of 19:28, 26 September 2015

Short description:p3@Prdm16
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Prdm16_5end
Coexpression cluster:NA
Association with transcript: 12bp_to_ENSMUST00000030902, ENSMUST00000070313, ENSMUST00000097759, ENSMUST00000105636, ENSMUST00000105637, ENSMUST00000105638, ENSMUST00000141164_5end
EntrezGene:Prdm16
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Prdm16

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H17.81
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E26.51
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E35.25
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G15.43
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D54.43
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A66.03
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system6.51e-0947
lung3.31e-0814
respiratory tube3.31e-0814
respiration organ3.31e-0814
pair of lungs3.31e-0814
lung primordium3.31e-0814
lung bud3.31e-0814
intestine5.71e-0831
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