FFCP PHASE1:Mm9::chr12:74685627..74685646,+: Difference between revisions
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{{FFCP|EntrezGene=18755|HGNC=|MCL_coexpression_id=7|UniProt=E9Q0I5|association_with_transcript=-136bp_to_ENSMUST00000164444_5end|description=CAGE_peak_5_at_Prkch_5end|id=chr12:74685627..74685646,+|ontology_enrichment_celltype=CL:0000084!2.34e-07!11;CL:0000827!2.34e-07!11;CL:0000791!5.46e-07!9;CL:0000789!5.46e-07!9;CL:0002420!5.46e-07!9;CL:0002419!5.46e-07!9;CL:0000790!5.46e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.50e-10,9;CL:0000789,2.50e-10,9;CL:0002420,2.50e-10,9;CL:0002419,2.50e-10,9;CL:0000790,2.50e-10,9;CL:0000084,9.48e-10,11;CL:0000827,9.48e-10,11;CL:0000624,2.57e-09,8;CL:0000838,1.17e-08,12;CL:0000542,9.60e-08,13;CL:0000051,9.60e-08,13;CL:0000893,2.15e-07,6;CL:0002489,2.15e-07,6;CL:0000898,2.15e-07,6;CL:0000809,2.15e-07,6;CL:0000810,2.15e-07,6;CL:0000895,2.15e-07,6;CL:0000808,2.15e-07,6;CL:0000894,2.15e-07,6;CL:0000806,2.15e-07,6;CL:0000807,2.15e-07,6;CL:0000805,2.15e-07,6;CL:0002425,2.15e-07,6;CL:0002436,2.15e-07,6;CL:0002427,2.15e-07,6;CL:0002428,2.15e-07,6;CL:0002429,2.15e-07,6;CL:0002433,2.15e-07,6;CL:0002431,2.15e-07,6;CL:0002432,2.15e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!1.45e-09!42;UBERON:0000065!1.47e-09!41|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.41e-12,41;UBERON:0001004,7.85e-12,42;UBERON:0002048,2.29e-08,14;UBERON:0000117,2.29e-08,14;UBERON:0000171,2.29e-08,14;UBERON:0000170,2.29e-08,14;UBERON:0005597,2.29e-08,14;UBERON:0000118,2.29e-08,14;UBERON:0006562,3.54e-07,24;UBERON:0001557,3.54e-07,24;UBERON:0001042,3.54e-07,24;UBERON:0008814,3.54e-07,24;UBERON:0009145,3.54e-07,24;UBERON:0000077,7.46e-07,35;UBERON:0001041,9.99e-07,80|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.700837921786577,2.06597317506522,12.1078301050433,9.36258105287974,8.90333434772626,5.50427897067821,2.05440875917447,1.39872643870396,0,0.202475267389826,0,0,0.411343300817216,0,1.10556277196391,1.78723712161594,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07753499407941,3.02484419228218,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0,0,0,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.191690942036473,0,0,0.766124028511126,0.153606533256243,1.45074916503213,1.46380229763855,0.52091337055676,0,0,0.30559649555362,0.294628585473668,0.854230084794618,0.745597783301202,0,0.0755715601067855,5.79728977403356,2.58127163094416,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0.5709193985953,0.517875767294343,0.742210695324124,0.520455980298408,0.304465478312141,0,0.904335843315735,0.587943535678524,0.753999547978053,1.48316980640624,0.86759614151947,0,1.13236794963186,0.883366073841574,1.45462575940567,0,0.292780797011547,0.209446706813455,0.510914110417183,0.359445373517761,0,0.254140454146129,0.599162557619291,1.37250180845588,1.00523481690292,0.347648640384553,0.511430914660661,1.24672826735736,1.1356888414743,0.203678727700633,0.995255764880744,1.26361379216837,0.210441855886474,0.520481771850815,1.14951052216736,0.540186389416048,1.20563854268572,1.36072998302656,1.0249097622788,1.40552586839593,0.258703370739016,0.215567992932842,0.567318240503458,1.23165786914764,0.657587197282725,0.278047249225598,1.0447564995665,0.823128545631774,0.59710280045548,0,0,0.284163499395593,0.828503090142008,0.469052119962192,1.62055855314913,2.3674473558521,1.37734962223183,0.617068451549513,1.62773761325285,1.3413670069981,1.05088808130453,1.97471819896177,1.80584210487005,2.10778904819225,2.04679982395465,0.878200461164203,0.671032093801859,0.420579897128254,0.514523061896422,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0.201683524623343,0.444756087689741,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.387904974335251,0.911765658574141,1.20149420536089,1.03327103585722,0.784993639206874,1.1105744752962,0.296452627087149,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0.482443521363367,2.21703828199926,0.757965647081939,0.162964976442026,0.678980343100753,1.64283173801951,1.34005005953453,2.14239276797412,2.34160377429359,2.83743259391144,3.32197034473162,3.98636921643718,4.09658286789345,3.28101465545202,4.05017364028232,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0.468846746368813,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.35613120733451,0.977321756121456,1.31976098378028,1.32745138339963,0.728341908464944,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,1.034869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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18755 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q0I5 | |||
|association_with_transcript=-136bp_to_ENSMUST00000164444_5end | |||
|cluster_id=chr12:74685627..74685646,+ | |||
|description=CAGE_peak_5_at_Prkch_5end | |||
|id=chr12:74685627..74685646,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.34e-07!11;CL:0000827!2.34e-07!11;CL:0000791!5.46e-07!9;CL:0000789!5.46e-07!9;CL:0002420!5.46e-07!9;CL:0002419!5.46e-07!9;CL:0000790!5.46e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.50e-10,9;CL:0000789,2.50e-10,9;CL:0002420,2.50e-10,9;CL:0002419,2.50e-10,9;CL:0000790,2.50e-10,9;CL:0000084,9.48e-10,11;CL:0000827,9.48e-10,11;CL:0000624,2.57e-09,8;CL:0000838,1.17e-08,12;CL:0000542,9.60e-08,13;CL:0000051,9.60e-08,13;CL:0000893,2.15e-07,6;CL:0002489,2.15e-07,6;CL:0000898,2.15e-07,6;CL:0000809,2.15e-07,6;CL:0000810,2.15e-07,6;CL:0000895,2.15e-07,6;CL:0000808,2.15e-07,6;CL:0000894,2.15e-07,6;CL:0000806,2.15e-07,6;CL:0000807,2.15e-07,6;CL:0000805,2.15e-07,6;CL:0002425,2.15e-07,6;CL:0002436,2.15e-07,6;CL:0002427,2.15e-07,6;CL:0002428,2.15e-07,6;CL:0002429,2.15e-07,6;CL:0002433,2.15e-07,6;CL:0002431,2.15e-07,6;CL:0002432,2.15e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.45e-09!42;UBERON:0000065!1.47e-09!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.41e-12,41;UBERON:0001004,7.85e-12,42;UBERON:0002048,2.29e-08,14;UBERON:0000117,2.29e-08,14;UBERON:0000171,2.29e-08,14;UBERON:0000170,2.29e-08,14;UBERON:0005597,2.29e-08,14;UBERON:0000118,2.29e-08,14;UBERON:0006562,3.54e-07,24;UBERON:0001557,3.54e-07,24;UBERON:0001042,3.54e-07,24;UBERON:0008814,3.54e-07,24;UBERON:0009145,3.54e-07,24;UBERON:0000077,7.46e-07,35;UBERON:0001041,9.99e-07,80 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.700837921786577,2.06597317506522,12.1078301050433,9.36258105287974,8.90333434772626,5.50427897067821,2.05440875917447,1.39872643870396,0,0.202475267389826,0,0,0.411343300817216,0,1.10556277196391,1.78723712161594,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07753499407941,3.02484419228218,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0,0,0,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.191690942036473,0,0,0.766124028511126,0.153606533256243,1.45074916503213,1.46380229763855,0.52091337055676,0,0,0.30559649555362,0.294628585473668,0.854230084794618,0.745597783301202,0,0.0755715601067855,5.79728977403356,2.58127163094416,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0.5709193985953,0.517875767294343,0.742210695324124,0.520455980298408,0.304465478312141,0,0.904335843315735,0.587943535678524,0.753999547978053,1.48316980640624,0.86759614151947,0,1.13236794963186,0.883366073841574,1.45462575940567,0,0.292780797011547,0.209446706813455,0.510914110417183,0.359445373517761,0,0.254140454146129,0.599162557619291,1.37250180845588,1.00523481690292,0.347648640384553,0.511430914660661,1.24672826735736,1.1356888414743,0.203678727700633,0.995255764880744,1.26361379216837,0.210441855886474,0.520481771850815,1.14951052216736,0.540186389416048,1.20563854268572,1.36072998302656,1.0249097622788,1.40552586839593,0.258703370739016,0.215567992932842,0.567318240503458,1.23165786914764,0.657587197282725,0.278047249225598,1.0447564995665,0.823128545631774,0.59710280045548,0,0,0.284163499395593,0.828503090142008,0.469052119962192,1.62055855314913,2.3674473558521,1.37734962223183,0.617068451549513,1.62773761325285,1.3413670069981,1.05088808130453,1.97471819896177,1.80584210487005,2.10778904819225,2.04679982395465,0.878200461164203,0.671032093801859,0.420579897128254,0.514523061896422,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0.201683524623343,0.444756087689741,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.387904974335251,0.911765658574141,1.20149420536089,1.03327103585722,0.784993639206874,1.1105744752962,0.296452627087149,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0.482443521363367,2.21703828199926,0.757965647081939,0.162964976442026,0.678980343100753,1.64283173801951,1.34005005953453,2.14239276797412,2.34160377429359,2.83743259391144,3.32197034473162,3.98636921643718,4.09658286789345,3.28101465545202,4.05017364028232,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0.468846746368813,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.35613120733451,0.977321756121456,1.31976098378028,1.32745138339963,0.728341908464944,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,1.03486947026204,1.28602221018955,0.532020700926821,0.891844088010353,1.15184314421485,1.522324745573,2.11204537257339,2.54198485036584,0.441056796109924,2.14352128823924,1.45317984026315,2.23157822234177,4.17803204010978,2.79039529566604,0.874442509889552,0.370850604021019,0.341741761595705,1.44470807574256,0.185194527369712,0.188368457004691,0.683471138605126,0.457556346413045,1.86976272993241,1.11961161858926,1.24379976423981,0,0.474503990371703,1.82987520414164,0.86404272657441,2.50905955217362,1.52853794622324,1.34864346384821,1.1571483801547,0.26175594198403,0.518459893167171,0.621339313086926,0,0.149516546043979,0.330916980914195,0.583353565032143,0,0.506868376472335,0.234714477291508,1.3020438484395,0.629156066554265,0.241584120826006,0,1.89606672376907,1.01362607645082,0.718976700153791,1.03936658382236,1.07416017400489,0.993406773906324,1.08175904567972,0.590758108698309,1.00966449948148,1.295515713135,0.604957110821043,1.16949456887703,1.6356013078856,1.05189211963412,2.49403421976732,0.443971906748129,0.269141569828427,0.503653849092235,0.965947970160952,0.563047426353546,0.73260649706906,2.35805216986972,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,1.47074806760011,0.222246727801615,0.618105171716683,1.28367683836726,0.505394423527595,0.50695859978048,0.754505365544305,1.12369808963859,0.576226371643824,0.746661096422973,1.90517476513229,0.811190281613988,0.192909220463705,2.06042950401653,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.846984423737976,0.25384382367503,1.09756783723664,0.526139422875686,0.40741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| |||
|short_description=p5@Prkch | |||
}} |
Latest revision as of 18:41, 26 September 2015
Short description: | p5@Prkch |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Prkch_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -136bp_to_ENSMUST00000164444_5end |
EntrezGene: | Prkch |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 2.41e-12 | 41 |
respiratory system | 7.85e-12 | 42 |
lung | 2.29e-08 | 14 |
respiratory tube | 2.29e-08 | 14 |
respiration organ | 2.29e-08 | 14 |
pair of lungs | 2.29e-08 | 14 |
lung primordium | 2.29e-08 | 14 |
lung bud | 2.29e-08 | 14 |
pharynx | 3.54e-07 | 24 |
upper respiratory tract | 3.54e-07 | 24 |
chordate pharynx | 3.54e-07 | 24 |
pharyngeal arch system | 3.54e-07 | 24 |
pharyngeal region of foregut | 3.54e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 7.46e-07 | 35 |
foregut | 9.99e-07 | 80 |