FFCP PHASE1:Mm9::chr1:173080723..173080740,-: Difference between revisions
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{{FFCP|EntrezGene=66052|HGNC=|MCL_coexpression_id=79|UniProt=Q9CZB0|association_with_transcript=0bp_to_ENSMUST00000111336,NM_025321,uc007dnb.2_5end|description=CAGE_peak_1_at_Sdhc_5end|id=chr1:173080723..173080740,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!3.89e-12!47;UBERON:0004535!5.96e-08!23;UBERON:0001009!5.96e-08!23;UBERON:0007100!6.33e-08!18;UBERON:0000948!6.33e-08!18;UBERON:0005498!6.33e-08!18;UBERON:0004140!6.33e-08!18;UBERON:0009881!6.33e-08!18;UBERON:0004141!6.33e-08!18;UBERON:0003084!6.33e-08!18;UBERON:0007005!6.33e-08!18;UBERON:0004139!6.33e-08!18;UBERON:0004291!6.33e-08!18;UBERON:0002365!8.85e-07!25;UBERON:0002330!8.85e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.89e-12,47;UBERON:0004535,5.96e-08,23;UBERON:0001009,5.96e-08,23;UBERON:0007100,6.33e-08,18;UBERON:0000948,6.33e-08,18;UBERON:0005498,6.33e-08,18;UBERON:0004140,6.33e-08,18;UBERON:0009881,6.33e-08,18;UBERON:0004141,6.33e-08,18;UBERON:0003084,6.33e-08,18;UBERON:0007005,6.33e-08,18;UBERON:0004139,6.33e-08,18;UBERON:0004291,6.33e-08,18;UBERON:0000160,1.55e-07,31;UBERON:0002365,8.85e-07,25;UBERON:0002330,8.85e-07,25|phase1_expression=55.5716499453635,175.185654634959,142.414761928925,92.2515844485832,106.189894748626,93.5087544549226,95.3139573629745,44.4184232639022,14.9236045480767,16.3845168425395,42.4620561199252,45.5499027863371,36.8081569352092,48.6057437449626,47.3015861778241,50.8212921148463,55.2653883721236,33.7544516933314,28.9311454908109,26.3121584114779,105.028463336571,69.5036658406197,71.5687422240683,216.149763193892,170.680505113975,215.911218507248,197.719756237015,209.868980636056,201.424824623756,183.981994724749,171.175954225895,44.4521471421742,69.5023209970564,47.5445043046316,194.97484333211,235.388257827625,188.039977117642,42.2716947044277,77.3521991078562,62.299325532882,39.411509698078,43.0318655523821,38.3553178894611,122.875294344163,120.841302013661,115.083813605374,206.551314907882,235.467168890882,152.901583183192,147.572293397381,167.283773842308,155.252769514169,20.1339127269284,26.1130371124084,27.8957853288245,97.244066821588,74.212160944138,74.7724533802291,86.996078169627,98.3923221445981,79.2289254382724,158.918085540423,127.169155843893,173.68064543531,177.007078899488,172.646667931902,196.837272610592,263.189539145265,59.9325959143001,73.5782363907714,52.7915652991969,144.825049092728,135.392415603339,53.0385160600751,85.3983146772486,65.2645338493115,85.8903871795232,112.109482838795,101.226705415864,82.6927024068315,127.625262825361,65.6350846901518,136.520486511675,83.2888662846886,96.7212908427208,93.6918901806263,109.341450853711,80.7109600423552,74.3631218531867,88.796583125473,63.4803230256674,201.339187213644,185.632174102216,284.42358199313,247.564815047562,261.647702064844,277.096840919946,149.978683868691,150.935668674267,121.195474057047,59.9992968248659,74.4293569003043,12.7402619853323,28.4426681261332,77.7202837230259,75.5012399115794,74.3120934171731,226.426633482896,104.869842877105,95.1514111405527,66.2713948246639,99.255745929758,74.719421110963,99.4769427647309,73.1401758384084,116.11593038862,67.4842261914841,525.329463690039,114.114761201534,121.648671160452,151.49728166383,109.096931955425,130.474232852686,86.663115915418,70.3740934893209,229.400435577315,84.5894779011797,142.776849976431,154.771536574993,82.9840142302718,62.6775825861518,55.0366062254346,76.8303495249862,42.9601968314955,116.984669087032,67.9790892253905,52.3454330190626,82.4818215144917,58.1262344397452,135.734997046776,81.4553972946525,58.8549387349691,73.8254732201932,55.3086681457074,48.5100238948968,58.8041976107461,55.8462278375984,81.4915617827899,80.4068613639502,66.1871280587367,58.7676754707589,92.9389905492917,54.2192135989916,63.3818943070343,55.3553946937368,52.9431149737192,145.35812977384,129.960693092931,117.643688749775,171.085888114325,181.054118305406,169.078275711893,174.00738065513,220.57270378884,252.9980651353,250.206524551439,271.224408815015,237.734237059557,206.193491941591,305.187315723038,446.283796549936,565.209151386335,466.763545108774,418.85823295112,78.6484407629836,54.1278261115036,216.093884071404,263.39276439689,65.9060694153873,58.5236413088305,94.9753189943828,142.186884859456,156.331764822944,178.621862919693,206.894670833407,170.134020229903,122.651581894532,99.4782360205754,123.412267146403,170.775687644302,183.501204343615,216.665705300752,141.302586210046,61.922693834473,67.6246414038483,91.2357948747008,87.084666738264,70.4864989897702,146.01316421991,235.881016471404,237.539075224,253.5811718593,294.673911324626,93.6001043067288,88.2549888058281,110.857021405733,112.181647127842,128.547426148038,104.905850933945,163.12370993461,151.596437034658,134.260531048972,139.455160331534,155.554916125434,173.492946251696,171.753637004036,304.078615919641,332.886029740723,59.4905272336467,66.5114855314401,67.1415702941147,60.598995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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66052 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CZB0 | |||
|association_with_transcript=0bp_to_ENSMUST00000111336,NM_025321,uc007dnb.2_5end | |||
|cluster_id=chr1:173080723..173080740,- | |||
|description=CAGE_peak_1_at_Sdhc_5end | |||
|id=chr1:173080723..173080740,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.89e-12!47;UBERON:0004535!5.96e-08!23;UBERON:0001009!5.96e-08!23;UBERON:0007100!6.33e-08!18;UBERON:0000948!6.33e-08!18;UBERON:0005498!6.33e-08!18;UBERON:0004140!6.33e-08!18;UBERON:0009881!6.33e-08!18;UBERON:0004141!6.33e-08!18;UBERON:0003084!6.33e-08!18;UBERON:0007005!6.33e-08!18;UBERON:0004139!6.33e-08!18;UBERON:0004291!6.33e-08!18;UBERON:0002365!8.85e-07!25;UBERON:0002330!8.85e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.89e-12,47;UBERON:0004535,5.96e-08,23;UBERON:0001009,5.96e-08,23;UBERON:0007100,6.33e-08,18;UBERON:0000948,6.33e-08,18;UBERON:0005498,6.33e-08,18;UBERON:0004140,6.33e-08,18;UBERON:0009881,6.33e-08,18;UBERON:0004141,6.33e-08,18;UBERON:0003084,6.33e-08,18;UBERON:0007005,6.33e-08,18;UBERON:0004139,6.33e-08,18;UBERON:0004291,6.33e-08,18;UBERON:0000160,1.55e-07,31;UBERON:0002365,8.85e-07,25;UBERON:0002330,8.85e-07,25 | |||
|phase1_expression=55.5716499453635,175.185654634959,142.414761928925,92.2515844485832,106.189894748626,93.5087544549226,95.3139573629745,44.4184232639022,14.9236045480767,16.3845168425395,42.4620561199252,45.5499027863371,36.8081569352092,48.6057437449626,47.3015861778241,50.8212921148463,55.2653883721236,33.7544516933314,28.9311454908109,26.3121584114779,105.028463336571,69.5036658406197,71.5687422240683,216.149763193892,170.680505113975,215.911218507248,197.719756237015,209.868980636056,201.424824623756,183.981994724749,171.175954225895,44.4521471421742,69.5023209970564,47.5445043046316,194.97484333211,235.388257827625,188.039977117642,42.2716947044277,77.3521991078562,62.299325532882,39.411509698078,43.0318655523821,38.3553178894611,122.875294344163,120.841302013661,115.083813605374,206.551314907882,235.467168890882,152.901583183192,147.572293397381,167.283773842308,155.252769514169,20.1339127269284,26.1130371124084,27.8957853288245,97.244066821588,74.212160944138,74.7724533802291,86.996078169627,98.3923221445981,79.2289254382724,158.918085540423,127.169155843893,173.68064543531,177.007078899488,172.646667931902,196.837272610592,263.189539145265,59.9325959143001,73.5782363907714,52.7915652991969,144.825049092728,135.392415603339,53.0385160600751,85.3983146772486,65.2645338493115,85.8903871795232,112.109482838795,101.226705415864,82.6927024068315,127.625262825361,65.6350846901518,136.520486511675,83.2888662846886,96.7212908427208,93.6918901806263,109.341450853711,80.7109600423552,74.3631218531867,88.796583125473,63.4803230256674,201.339187213644,185.632174102216,284.42358199313,247.564815047562,261.647702064844,277.096840919946,149.978683868691,150.935668674267,121.195474057047,59.9992968248659,74.4293569003043,12.7402619853323,28.4426681261332,77.7202837230259,75.5012399115794,74.3120934171731,226.426633482896,104.869842877105,95.1514111405527,66.2713948246639,99.255745929758,74.719421110963,99.4769427647309,73.1401758384084,116.11593038862,67.4842261914841,525.329463690039,114.114761201534,121.648671160452,151.49728166383,109.096931955425,130.474232852686,86.663115915418,70.3740934893209,229.400435577315,84.5894779011797,142.776849976431,154.771536574993,82.9840142302718,62.6775825861518,55.0366062254346,76.8303495249862,42.9601968314955,116.984669087032,67.9790892253905,52.3454330190626,82.4818215144917,58.1262344397452,135.734997046776,81.4553972946525,58.8549387349691,73.8254732201932,55.3086681457074,48.5100238948968,58.8041976107461,55.8462278375984,81.4915617827899,80.4068613639502,66.1871280587367,58.7676754707589,92.9389905492917,54.2192135989916,63.3818943070343,55.3553946937368,52.9431149737192,145.35812977384,129.960693092931,117.643688749775,171.085888114325,181.054118305406,169.078275711893,174.00738065513,220.57270378884,252.9980651353,250.206524551439,271.224408815015,237.734237059557,206.193491941591,305.187315723038,446.283796549936,565.209151386335,466.763545108774,418.85823295112,78.6484407629836,54.1278261115036,216.093884071404,263.39276439689,65.9060694153873,58.5236413088305,94.9753189943828,142.186884859456,156.331764822944,178.621862919693,206.894670833407,170.134020229903,122.651581894532,99.4782360205754,123.412267146403,170.775687644302,183.501204343615,216.665705300752,141.302586210046,61.922693834473,67.6246414038483,91.2357948747008,87.084666738264,70.4864989897702,146.01316421991,235.881016471404,237.539075224,253.5811718593,294.673911324626,93.6001043067288,88.2549888058281,110.857021405733,112.181647127842,128.547426148038,104.905850933945,163.12370993461,151.596437034658,134.260531048972,139.455160331534,155.554916125434,173.492946251696,171.753637004036,304.078615919641,332.886029740723,59.4905272336467,66.5114855314401,67.1415702941147,60.5989956217422,63.1316767896071,69.1800843234699,81.4109251830167,41.7586006415689,56.5910167341226,65.7750128256861,42.4149684628916,46.8649080087011,54.0503993240253,54.9666422609744,108.569724436276,141.415477792864,122.44930398174,103.752216610579,96.0092528126996,88.6120350637056,104.262625259566,374.414385044085,50.1658068871848,55.051862945826,43.0846795465598,45.6430404089374,49.9069029944563,41.8953265567472,48.5772842009873,49.9757517028343,32.8088855695615,81.615614371139,62.5955775768465,84.2250305346117,60.7568358388839,55.1000210728268,100.886305138372,75.0192165718893,83.4413017222713,117.500964687925,115.167738223501,73.1695652106547,60.9890771877002,67.9808074122935,82.3508944068706,88.8063289799643,63.2511651449993,76.3203020036583,44.2571487479924,57.0793668079253,88.9987744425351,53.5842587578981,57.4582357000966,68.136888323991,46.5673728304002,58.7617351791177,78.615022201343,68.2099268181501,74.9796553386871,121.850940923754,85.414681722134,89.7456322930959,65.5354168577219,50.883678920969,174.014059468021,106.248698052022,58.6087121136635,65.4246371443415,72.2258656741876,74.7822774308623,52.3538892171526,43.4678529092393,84.4792797069461,84.3907257511658,75.8717856186287,248.214360683929,68.3285746135252,68.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| |||
|short_description=p1@Sdhc | |||
}} |
Latest revision as of 18:34, 26 September 2015
Short description: | p1@Sdhc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sdhc_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000111336, NM_025321, uc007dnb.2_5end |
EntrezGene: | Sdhc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.89e-12 | 47 |
cardiovascular system | 5.96e-08 | 23 |
circulatory system | 5.96e-08 | 23 |
primary circulatory organ | 6.33e-08 | 18 |
heart | 6.33e-08 | 18 |
primitive heart tube | 6.33e-08 | 18 |
primary heart field | 6.33e-08 | 18 |
anterior lateral plate mesoderm | 6.33e-08 | 18 |
heart tube | 6.33e-08 | 18 |
heart primordium | 6.33e-08 | 18 |
cardiac mesoderm | 6.33e-08 | 18 |
cardiogenic plate | 6.33e-08 | 18 |
heart rudiment | 6.33e-08 | 18 |
intestine | 1.55e-07 | 31 |
exocrine gland | 8.85e-07 | 25 |
exocrine system | 8.85e-07 | 25 |