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FFCP PHASE1:Mm9::chr15:37721921..37721943,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:37721921..37721943,-
|DHSsupport=NA
|short_description=p5@Ncald
|DPIdataset=NA
|description=CAGE_peak_5_at_Ncald_5end
|association_with_transcript=50bp_to_ENSMUST00000123317_5end
|EntrezGene=52589
|EntrezGene=52589
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=50bp_to_ENSMUST00000123317_5end
|cluster_id=chr15:37721921..37721943,-
|description=CAGE_peak_5_at_Ncald_5end
|id=chr15:37721921..37721943,-
|ontology_enrichment_celltype=CL:0000117!6.59e-11!23;CL:0000337!6.59e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-12,23;CL:0000337,4.63e-12,23;CL:0000540,4.53e-07,33;CL:0000047,4.53e-07,33;CL:0000031,4.53e-07,33;CL:0000404,4.53e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.24e-21!52;UBERON:0005068!2.24e-21!52;UBERON:0006241!2.24e-21!52;UBERON:0007135!2.24e-21!52;UBERON:0000955!2.96e-20!50;UBERON:0006238!2.96e-20!50;UBERON:0002616!1.08e-19!49;UBERON:0000033!5.51e-19!63;UBERON:0007811!9.19e-18!86;UBERON:0000153!1.68e-17!94;UBERON:0001017!6.59e-17!73;UBERON:0005743!6.59e-17!73;UBERON:0002346!2.71e-16!71;UBERON:0003075!2.71e-16!71;UBERON:0007284!2.71e-16!71;UBERON:0003056!2.97e-16!49;UBERON:0003080!5.42e-16!40;UBERON:0000073!6.01e-16!75;UBERON:0001016!6.01e-16!75;UBERON:0002020!1.22e-15!34;UBERON:0002780!2.87e-15!39;UBERON:0001890!2.87e-15!39;UBERON:0006240!2.87e-15!39;UBERON:0002791!1.10e-12!29;UBERON:0003528!1.10e-12!29;UBERON:0001893!1.10e-12!29;UBERON:0004121!3.29e-12!102;UBERON:0000924!3.29e-12!102;UBERON:0006601!3.29e-12!102;UBERON:0002021!2.42e-08!10;UBERON:0000411!2.42e-08!10;UBERON:0001950!2.42e-08!10;UBERON:0000956!2.68e-08!21;UBERON:0001869!2.68e-08!21;UBERON:0000203!2.68e-08!21;UBERON:0002619!1.74e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.00e-36,54;UBERON:0001049,2.64e-33,52;UBERON:0005068,2.64e-33,52;UBERON:0006241,2.64e-33,52;UBERON:0007135,2.64e-33,52;UBERON:0001017,2.22e-29,73;UBERON:0001016,3.12e-28,75;UBERON:0000955,1.84e-27,47;UBERON:0006238,1.84e-27,47;UBERON:0002616,2.03e-26,46;UBERON:0002346,9.07e-25,64;UBERON:0003075,9.07e-25,64;UBERON:0007284,9.07e-25,64;UBERON:0002020,8.79e-24,34;UBERON:0003080,1.58e-23,40;UBERON:0002780,3.49e-22,39;UBERON:0001890,3.49e-22,39;UBERON:0006240,3.49e-22,39;UBERON:0010371,3.08e-20,73;UBERON:0004121,1.87e-19,95;UBERON:0000924,1.87e-19,95;UBERON:0006601,1.87e-19,95;UBERON:0003528,3.71e-18,29;UBERON:0002791,3.71e-18,29;UBERON:0001893,3.71e-18,29;UBERON:0003056,1.62e-17,49;UBERON:0002021,3.29e-15,10;UBERON:0000411,3.29e-15,10;UBERON:0001950,3.29e-15,10;UBERON:0010314,1.17e-13,92;UBERON:0002619,3.73e-11,17;UBERON:0002420,3.12e-10,8;UBERON:0007245,3.12e-10,8;UBERON:0010009,3.12e-10,8;UBERON:0010011,3.12e-10,8;UBERON:0000454,3.12e-10,8;UBERON:0000956,4.69e-10,21;UBERON:0001869,4.69e-10,21;UBERON:0000203,4.69e-10,21;UBERON:0003076,4.92e-10,12;UBERON:0003057,4.92e-10,12;UBERON:0000025,1.66e-09,114;UBERON:0004111,3.53e-08,122;UBERON:0002240,4.51e-08,6;UBERON:0005174,4.51e-08,6;UBERON:0001137,4.51e-08,6;UBERON:0001948,3.50e-07,5;UBERON:0002315,3.50e-07,5;UBERON:0011216,4.47e-07,194
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,1.02051948181284,0.297872853602656,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,0,0,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.210324961351382,5.42736870367227,3.3130281142742,0.857435594504678,0.575072826109418,0.919218786610021,3.30347642998166,5.87361755191863,6.45147439676223,2.2420668914133,2.92760459527711,2.08365348222704,5.02529398202486,5.6276261003168,5.95913166329559,3.53554302568401,4.41352210477219,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0,0,2.34224637609238,2.51336048176146,0.255457055208591,0,0,0,10.7849260371472,7.77751024791665,1.25654352112864,9.38651329038293,9.46147192122223,9.14267396062064,6.00292673350703,0.509196819251581,0.746441823660558,1.0108910337347,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.753524089178575,0.816437989815934,0.768682321709099,0.843315521037559,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0.876782929710299,1.11218899690239,0,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0,0.329119699826961,0.492502392237286,0.324275238183423,0,0,0.268412837520744,3.99550902271842,2.36680608472354,0,0,0,0,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.799739588268102,0,0.814605311381257,1.16371492300575,0.771494018793504,0.948548056863859,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0.788175720530955,0.44292937929755,0.956728611944923,0,0.863424909329478,0.723245292907558,0,0,0,0,6.26147300952389,4.21962071731931,0,0.252470927204373,0,0,0,0,0,0,0.809621403349789,0.584511715822624,0,2.24924921495265,0.425820255624806,0.35613120733451,0.325773918707152,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0.356497378384721,0.316036757935816,0,0,0,1.26042765821917,1.03486947026204,0.643011105094777,0.532020700926821,1.24858172321449,1.15184314421485,1.522324745573,0,0,0,0,0.161464426695906,0.482503399425247,0.238744688006273,0.492422699235184,0.582961673259701,1.8542530201051,0.512612642393558,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0,0,0,0.609958401380546,0.540026704109006,0.209088296014469,0.655087691238533,0.809186078308924,0.41326727862668,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0.352071715937262,0,0.209718688851422,0,0.288030006257865,5.05617793005085,0.608175645870493,0.513554785824136,0.389762468933385,1.07416017400489,0.596044064343795,0.480781798079875,0.590758108698309,1.11063094942962,0.990688486514998,2.01652370273681,2.33898913775406,1.6356013078856,4.20756847853648,0.453460767230423,0,0,0,0.386379188064381,0,0.36630324853453,0,0,5.0827665835536,9.66682996665071,8.59343270159095,4.81188910562325,11.6464028361009,6.0431511791176,9.45031500324528,11.2580300806055,9.9691329976525,10.3552062350364,0,0.399024873401031,0,0.486213434136588,0.628839487883947,0.551530525350042,0.888986911206461,0.824140228955577,0.962757628775446,1.26348605881899,1.2673964994512,0.754505365544305,0.936415074698824,1.08842759088278,1.09127391015665,1.42888107384922,0.811190281613988,0.192909220463705,0.824171801606613,1.03039244094078,1.02860775715625,1.4198064492747,0.953744759789284,0.726732083161643,1.03520318456864,0.930760686808441,1.28049581010941,1.31534855718921,0.814824683075171,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0.619747364743864,0.771626443924566,1.74867404556562,0.467863216890817,1.93383948643468,0.765153328275374,0.441182838239031,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,1.02051948181284,0.297872853602656,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,0,0,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.210324961351382,5.42736870367227,3.3130281142742,0.857435594504678,0.575072826109418,0.919218786610021,3.30347642998166,5.87361755191863,6.45147439676223,2.2420668914133,2.92760459527711,2.08365348222704,5.02529398202486,5.6276261003168,5.95913166329559,3.53554302568401,4.41352210477219,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0,0,2.34224637609238,2.51336048176146,0.255457055208591,0,0,0,10.7849260371472,7.77751024791665,1.25654352112864,9.38651329038293,9.46147192122223,9.14267396062064,6.00292673350703,0.509196819251581,0.746441823660558,1.0108910337347,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.753524089178575,0.816437989815934,0.768682321709099,0.843315521037559,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0.876782929710299,1.11218899690239,0,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0,0.329119699826961,0.492502392237286,0.324275238183423,0,0,0.268412837520744,3.99550902271842,2.36680608472354,0,0,0,0,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.799739588268102,0,0.814605311381257,1.16371492300575,0.771494018793504,0.948548056863859,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0.788175720530955,0.44292937929755,0.956728611944923,0,0.863424909329478,0.723245292907558,0,0,0,0,6.26147300952389,4.21962071731931,0,0.252470927204373,0,0,0,0,0,0,0.809621403349789,0.584511715822624,0,2.24924921495265,0.425820255624806,0.35613120733451,0.325773918707152,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0.356497378384721,0.316036757935816,0,0,0,1.26042765821917,1.03486947026204,0.643011105094777,0.532020700926821,1.24858172321449,1.15184314421485,1.522324745573,0,0,0,0,0.161464426695906,0.482503399425247,0.238744688006273,0.492422699235184,0.582961673259701,1.8542530201051,0.512612642393558,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0,0,0,0.609958401380546,0.540026704109006,0.209088296014469,0.655087691238533,0.809186078308924,0.41326727862668,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0.352071715937262,0,0.209718688851422,0,0.288030006257865,5.05617793005085,0.608175645870493,0.513554785824136,0.389762468933385,1.07416017400489,0.596044064343795,0.480781798079875,0.590758108698309,1.11063094942962,0.990688486514998,2.01652370273681,2.33898913775406,1.6356013078856,4.20756847853648,0.453460767230423,0,0,0,0.386379188064381,0,0.36630324853453,0,0,5.0827665835536,9.66682996665071,8.59343270159095,4.81188910562325,11.6464028361009,6.0431511791176,9.45031500324528,11.2580300806055,9.9691329976525,10.3552062350364,0,0.399024873401031,0,0.486213434136588,0.628839487883947,0.551530525350042,0.888986911206461,0.824140228955577,0.962757628775446,1.26348605881899,1.2673964994512,0.754505365544305,0.936415074698824,1.08842759088278,1.09127391015665,1.42888107384922,0.811190281613988,0.192909220463705,0.824171801606613,1.03039244094078,1.02860775715625,1.4198064492747,0.953744759789284,0.726732083161643,1.03520318456864,0.930760686808441,1.28049581010941,1.31534855718921,0.814824683075171,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0.619747364743864,0.771626443924566,1.74867404556562,0.467863216890817,1.93383948643468,0.765153328275374,0.441182838239031,0
|short_description=p5@Ncald
}}
}}

Latest revision as of 18:29, 26 September 2015

Short description:p5@Ncald
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ncald_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 50bp_to_ENSMUST00000123317_5end
EntrezGene:Ncald
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ncald

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B26.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.63e-1223
neuroblast (sensu Vertebrata)4.63e-1223
neuron4.53e-0733
neuronal stem cell4.53e-0733
neuroblast4.53e-0733
electrically signaling cell4.53e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.00e-3654
neural tube2.64e-3352
neural rod2.64e-3352
future spinal cord2.64e-3352
neural keel2.64e-3352
central nervous system2.22e-2973
nervous system3.12e-2875
brain1.84e-2747
future brain1.84e-2747
regional part of brain2.03e-2646
neurectoderm9.07e-2564
neural plate9.07e-2564
presumptive neural plate9.07e-2564
gray matter8.79e-2434
anterior neural tube1.58e-2340
regional part of forebrain3.49e-2239
forebrain3.49e-2239
future forebrain3.49e-2239
ecto-epithelium3.08e-2073
ectoderm-derived structure1.87e-1995
ectoderm1.87e-1995
presumptive ectoderm1.87e-1995
brain grey matter3.71e-1829
regional part of telencephalon3.71e-1829
telencephalon3.71e-1829
pre-chordal neural plate1.62e-1749
occipital lobe3.29e-1510
visual cortex3.29e-1510
neocortex3.29e-1510
structure with developmental contribution from neural crest1.17e-1392
regional part of cerebral cortex3.73e-1117
basal ganglion3.12e-108
nuclear complex of neuraxis3.12e-108
aggregate regional part of brain3.12e-108
collection of basal ganglia3.12e-108
cerebral subcortex3.12e-108
cerebral cortex4.69e-1021
cerebral hemisphere4.69e-1021
pallium4.69e-1021
posterior neural tube4.92e-1012
chordal neural plate4.92e-1012
tube1.66e-09114
anatomical conduit3.53e-08122
spinal cord4.51e-086
dorsal region element4.51e-086
dorsum4.51e-086
regional part of spinal cord3.50e-075
gray matter of spinal cord3.50e-075
organ system subdivision4.47e-07194
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