FFCP PHASE1:Mm9::chr11:102294136..102294159,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:102294136..102294159,+
|short_description=p8@Grn
|description=CAGE_peak_8_at_Grn_5end
|association_with_transcript=37bp_to_ENSMUST00000135517_5end
|Entre...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14824 | |EntrezGene=14824 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2622 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENSMUST00000135517_5end | |||
|cluster_id=chr11:102294136..102294159,+ | |||
|description=CAGE_peak_8_at_Grn_5end | |||
|id=chr11:102294136..102294159,+ | |||
|ontology_enrichment_celltype=CL:0000049!9.33e-11!19;CL:0000988!5.07e-10!32;CL:0002032!5.07e-10!32;CL:0000037!5.07e-10!32;CL:0000566!5.07e-10!32;CL:0000837!5.07e-10!32;CL:0002320!9.45e-09!46;CL:0000134!9.45e-09!46;CL:0000763!9.41e-08!16;CL:0000219!4.17e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.72e-13,19;CL:0000988,6.63e-12,32;CL:0002032,6.63e-12,32;CL:0000037,6.63e-12,32;CL:0000837,6.63e-12,32;CL:0002476,2.42e-09,2;CL:0000839,2.12e-08,13;CL:0002031,7.53e-08,25;CL:0002320,8.34e-08,46;CL:0000134,8.34e-08,46;CL:0000553,1.86e-07,6;CL:0000556,1.86e-07,6;CL:0000763,8.87e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.31e-18!48;UBERON:0002390!2.75e-15!45;UBERON:0003061!2.75e-15!45;UBERON:0002405!4.35e-14!70;UBERON:0002371!4.54e-11!16;UBERON:0001474!5.93e-10!22;UBERON:0004765!5.93e-10!22;UBERON:0001434!5.93e-10!22;UBERON:0003081!8.68e-09!88;UBERON:0002384!9.45e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002075,6.53e-08,19;UBERON:0002384,8.34e-08,46;UBERON:0002106,5.38e-07,6;UBERON:0004457,5.38e-07,6;UBERON:0000042,5.38e-07,6;UBERON:0004854,5.38e-07,6;UBERON:0009034,5.38e-07,6;UBERON:0002095,5.38e-07,6;UBERON:0004782,5.38e-07,6;UBERON:0003281,5.38e-07,6;UBERON:0009664,5.38e-07,6;UBERON:0002296,5.38e-07,6;UBERON:0005602,5.38e-07,6;UBERON:0001179,5.38e-07,6;UBERON:0006293,5.38e-07,6;UBERON:0002371,8.87e-07,16;UBERON:0001474,9.78e-07,22;UBERON:0004765,9.78e-07,22;UBERON:0001434,9.78e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.999329285446988,0.202475267389826,0,6.78243655520211,4.79900517620086,5.51706547337439,0,1.29078236561151,0.783599367416806,0.95995453676044,0.68822784320151,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0,0.883366073841574,0,0,0,0,1.02182822083437,1.67741174308288,1.19980546198682,1.52484272487678,0,0,0,0,0,0,0,0,0.622034853050465,0,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0.624075346229121,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.690739927463582,0.144649058581512,1.50791283939272,2.17562273527484,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,19.9117707509944,0,0,0,0,0,0.258428293168221,0,0,0,3.16255825724996,3.09406629744561,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.119372344003136,0,0,0,2.22132145037209,0,0,0.753473828018764,1.6403307326523,2.28778173206523,0.849892149969277,0.839708713941948,1.10559979043539,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.480781798079875,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.487289403698762,0.192423683280659,0.467507608726276,0,0,0,0,0,0.563047426353546,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.999329285446988,0.202475267389826,0,6.78243655520211,4.79900517620086,5.51706547337439,0,1.29078236561151,0.783599367416806,0.95995453676044,0.68822784320151,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0,0.883366073841574,0,0,0,0,1.02182822083437,1.67741174308288,1.19980546198682,1.52484272487678,0,0,0,0,0,0,0,0,0.622034853050465,0,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0.624075346229121,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.690739927463582,0.144649058581512,1.50791283939272,2.17562273527484,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,19.9117707509944,0,0,0,0,0,0.258428293168221,0,0,0,3.16255825724996,3.09406629744561,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.119372344003136,0,0,0,2.22132145037209,0,0,0.753473828018764,1.6403307326523,2.28778173206523,0.849892149969277,0.839708713941948,1.10559979043539,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.480781798079875,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.487289403698762,0.192423683280659,0.467507608726276,0,0,0,0,0,0.563047426353546,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p8@Grn | |||
}} | }} |
Latest revision as of 18:25, 26 September 2015
Short description: | p8@Grn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Grn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2622 |
Association with transcript: | 37bp_to_ENSMUST00000135517_5end |
EntrezGene: | Grn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.72e-13 | 19 |
hematopoietic cell | 6.63e-12 | 32 |
hematopoietic oligopotent progenitor cell | 6.63e-12 | 32 |
hematopoietic stem cell | 6.63e-12 | 32 |
hematopoietic multipotent progenitor cell | 6.63e-12 | 32 |
bone marrow macrophage | 2.42e-09 | 2 |
myeloid lineage restricted progenitor cell | 2.12e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 7.53e-08 | 25 |
connective tissue cell | 8.34e-08 | 46 |
mesenchymal cell | 8.34e-08 | 46 |
megakaryocyte progenitor cell | 1.86e-07 | 6 |
megakaryocyte | 1.86e-07 | 6 |
myeloid cell | 8.87e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
viscus | 6.53e-08 | 19 |
connective tissue | 8.34e-08 | 46 |
spleen | 5.38e-07 | 6 |
cavity lining | 5.38e-07 | 6 |
serous membrane | 5.38e-07 | 6 |
gastrointestinal system mesentery | 5.38e-07 | 6 |
stomach region | 5.38e-07 | 6 |
mesentery | 5.38e-07 | 6 |
gastrointestinal system serosa | 5.38e-07 | 6 |
mesentery of stomach | 5.38e-07 | 6 |
gut mesentery | 5.38e-07 | 6 |
dorsal mesentery | 5.38e-07 | 6 |
dorsal mesogastrium | 5.38e-07 | 6 |
peritoneal cavity | 5.38e-07 | 6 |
spleen primordium | 5.38e-07 | 6 |
bone marrow | 8.87e-07 | 16 |
bone element | 9.78e-07 | 22 |
skeletal element | 9.78e-07 | 22 |
skeletal system | 9.78e-07 | 22 |