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FFCP PHASE1:Mm9::chr2:4803250..4803298,+: Difference between revisions

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{{FFCP|EntrezGene=109079|HGNC=|MCL_coexpression_id=108|UniProt=Q8BH69|association_with_transcript=0bp_to_ENSMUST00000115019,uc008ifc.1_5end|description=CAGE_peak_3_at_Sephs1_5end|id=chr2:4803250..4803298,+|ontology_enrichment_celltype=CL:0000540!1.91e-08!33;CL:0000047!1.91e-08!33;CL:0000031!1.91e-08!33;CL:0000404!1.91e-08!33;CL:0000117!1.18e-07!23;CL:0000337!1.18e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.96e-08,33;CL:0000047,1.96e-08,33;CL:0000031,1.96e-08,33;CL:0000404,1.96e-08,33;CL:0000117,1.22e-07,23;CL:0000337,1.22e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.87e-12!71;UBERON:0003075!2.87e-12!71;UBERON:0007284!2.87e-12!71;UBERON:0003056!5.87e-10!49;UBERON:0004121!1.31e-09!102;UBERON:0000924!1.31e-09!102;UBERON:0006601!1.31e-09!102;UBERON:0001017!4.14e-09!73;UBERON:0005743!4.14e-09!73;UBERON:0000033!9.34e-09!63;UBERON:0000073!4.31e-08!75;UBERON:0001016!4.31e-08!75;UBERON:0000468!5.30e-08!333;UBERON:0001049!6.65e-08!52;UBERON:0005068!6.65e-08!52;UBERON:0006241!6.65e-08!52;UBERON:0007135!6.65e-08!52;UBERON:0000479!2.84e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.88e-12,64;UBERON:0003075,6.88e-12,64;UBERON:0007284,6.88e-12,64;UBERON:0010371,4.29e-10,73;UBERON:0010314,6.25e-10,92;UBERON:0003056,7.24e-10,49;UBERON:0001017,4.88e-09,73;UBERON:0004121,6.35e-09,95;UBERON:0000924,6.35e-09,95;UBERON:0006601,6.35e-09,95;UBERON:0001016,4.82e-08,75;UBERON:0001049,7.99e-08,52;UBERON:0005068,7.99e-08,52;UBERON:0006241,7.99e-08,52;UBERON:0007135,7.99e-08,52;UBERON:0000479,1.80e-07,349;UBERON:0000073,1.89e-07,54|phase1_expression=11.3705681444404,0.348975407639361,0,0,0,1.6787927191189,1.40167584357315,0.387369970324729,0.422366166455,1.87251621057595,1.19852577757853,0.797721589953364,1.36960583944965,1.31130603628496,1.33243904726265,1.41732687172878,4.19737126876888,1.89277299214943,1.7824876368746,0.42438965179803,1.87095238332354,3.3758923408301,2.87319768052829,0.639969691173627,0.45881856213434,0,0.430761996159075,0.646413698057667,1.33016393619462,2.26827116783938,0.886922042621219,1.90509202037889,3.69038872550742,0,1.73310971850765,3.15845826181135,1.42918549383658,0.418531630736908,0,1.0470474879476,0,0.683045484958446,0.485510353031154,1.1330713617802,1.11514624341466,1.28482726513177,3.12956537739216,2.8343270329458,1.75748946187577,3.88859798148567,2.79972843250725,1.43752564364972,0.167782606057736,0.725362142011344,1.00828139742739,0.514518872071894,0.85960031981627,2.06268836910977,14.3644687210314,15.340738398889,19.0149421051854,2.37191172448392,3.55717918444456,1.7997994345628,0,2.8419204597844,1.49800055259202,1.92109152660777,8.19147937236973,9.04539786822327,7.15104868594699,10.8547374073445,10.6016899656774,15.0663683034393,11.5973019932066,21.1420320920305,2.20231761998777,2.80912143787413,3.37934373163736,17.8046488435762,14.729510619988,12.5019208933622,3.62937898701795,0.56276261003168,3.20876320331301,11.7851434189467,10.6778760599327,10.4383689662168,0.37863096666592,1.058001841495,1.44932244350839,0,0,1.07940638327563,0.649776417447669,1.34408066129201,1.26399978118577,1.70430322578058,0.779358013808606,4.24007489412408,7.60554466794075,2.56652954828636,10.1922095882658,0,1.08245520505607,2.28023878927589,0.505524445014783,1.59857431606684,0,1.63286352971307,5.03107447621794,5.1759131313064,5.07354093963329,4.22023393547343,5.76184664964954,3.39299796590124,5.43828929015623,1.59059292611903,0,3.07357014900077,1.98757366614354,0,3.72783522436244,3.80615036115011,2.93225389538837,1.27728527604296,2.15667224110656,1.19980546198682,1.27070227073065,4.6435098215495,3.20250421973039,15.0785222535437,2.08589184230732,3.83573185995496,2.49345653471472,4.05603157669394,9.47106083807942,3.6078021476927,9.85618757891331,2.94618598241064,10.539755879979,10.8053989083732,10.9837899181263,11.1521565198429,15.0360663124435,11.914575986491,10.5882948752494,8.01980449290949,9.7005596819779,10.2117283290622,9.14945845652534,10.5213951565236,6.39508673218875,4.179025998266,3.2925141825271,10.3497818745616,2.1066395619397,1.02939162845886,1.13665399758237,4.55676699578104,6.56672967947069,5.22179978236943,5.91861838963026,5.50939848892731,5.707883176833,2.55787339225449,3.75582761959467,5.7215017759913,2.96207729844265,2.46251196118643,1.94565142910054,1.02339991197733,1.3173006917463,0.805238512562231,3.57492912559016,10.2904612379284,0.330418782983798,0.793351699990633,11.5175655289026,8.82499353069666,7.86091514064769,4.43703754171354,4.22518283305254,3.99473814836374,0.474529061544512,4.94096864172033,2.76468729680296,4.17808591286417,4.09424582950152,2.69645822596266,1.08069024937347,1.1948476395262,10.2420666514664,8.68288695833939,12.3978509240388,10.1825663922657,6.98228953803453,9.53847150508332,7.27220176928959,3.83786384746966,3.29697328466887,4.56569506510662,0,2.8363667971736,2.35870794135844,1.34917267430912,2.23146133527353,1.4470629585145,1.52775511068852,2.30156909960649,2.2698931748505,0.549122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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109079
|HGNC=
|MCL_coexpression_id=108
|TSSclassifier=NA
|UniProt=Q8BH69
|association_with_transcript=0bp_to_ENSMUST00000115019,uc008ifc.1_5end
|cluster_id=chr2:4803250..4803298,+
|description=CAGE_peak_3_at_Sephs1_5end
|id=chr2:4803250..4803298,+
|ontology_enrichment_celltype=CL:0000540!1.91e-08!33;CL:0000047!1.91e-08!33;CL:0000031!1.91e-08!33;CL:0000404!1.91e-08!33;CL:0000117!1.18e-07!23;CL:0000337!1.18e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.96e-08,33;CL:0000047,1.96e-08,33;CL:0000031,1.96e-08,33;CL:0000404,1.96e-08,33;CL:0000117,1.22e-07,23;CL:0000337,1.22e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.88e-12,64;UBERON:0003075,6.88e-12,64;UBERON:0007284,6.88e-12,64;UBERON:0010371,4.29e-10,73;UBERON:0010314,6.25e-10,92;UBERON:0003056,7.24e-10,49;UBERON:0001017,4.88e-09,73;UBERON:0004121,6.35e-09,95;UBERON:0000924,6.35e-09,95;UBERON:0006601,6.35e-09,95;UBERON:0001016,4.82e-08,75;UBERON:0001049,7.99e-08,52;UBERON:0005068,7.99e-08,52;UBERON:0006241,7.99e-08,52;UBERON:0007135,7.99e-08,52;UBERON:0000479,1.80e-07,349;UBERON:0000073,1.89e-07,54
|phase1_expression=11.3705681444404,0.348975407639361,0,0,0,1.6787927191189,1.40167584357315,0.387369970324729,0.422366166455,1.87251621057595,1.19852577757853,0.797721589953364,1.36960583944965,1.31130603628496,1.33243904726265,1.41732687172878,4.19737126876888,1.89277299214943,1.7824876368746,0.42438965179803,1.87095238332354,3.3758923408301,2.87319768052829,0.639969691173627,0.45881856213434,0,0.430761996159075,0.646413698057667,1.33016393619462,2.26827116783938,0.886922042621219,1.90509202037889,3.69038872550742,0,1.73310971850765,3.15845826181135,1.42918549383658,0.418531630736908,0,1.0470474879476,0,0.683045484958446,0.485510353031154,1.1330713617802,1.11514624341466,1.28482726513177,3.12956537739216,2.8343270329458,1.75748946187577,3.88859798148567,2.79972843250725,1.43752564364972,0.167782606057736,0.725362142011344,1.00828139742739,0.514518872071894,0.85960031981627,2.06268836910977,14.3644687210314,15.340738398889,19.0149421051854,2.37191172448392,3.55717918444456,1.7997994345628,0,2.8419204597844,1.49800055259202,1.92109152660777,8.19147937236973,9.04539786822327,7.15104868594699,10.8547374073445,10.6016899656774,15.0663683034393,11.5973019932066,21.1420320920305,2.20231761998777,2.80912143787413,3.37934373163736,17.8046488435762,14.729510619988,12.5019208933622,3.62937898701795,0.56276261003168,3.20876320331301,11.7851434189467,10.6778760599327,10.4383689662168,0.37863096666592,1.058001841495,1.44932244350839,0,0,1.07940638327563,0.649776417447669,1.34408066129201,1.26399978118577,1.70430322578058,0.779358013808606,4.24007489412408,7.60554466794075,2.56652954828636,10.1922095882658,0,1.08245520505607,2.28023878927589,0.505524445014783,1.59857431606684,0,1.63286352971307,5.03107447621794,5.1759131313064,5.07354093963329,4.22023393547343,5.76184664964954,3.39299796590124,5.43828929015623,1.59059292611903,0,3.07357014900077,1.98757366614354,0,3.72783522436244,3.80615036115011,2.93225389538837,1.27728527604296,2.15667224110656,1.19980546198682,1.27070227073065,4.6435098215495,3.20250421973039,15.0785222535437,2.08589184230732,3.83573185995496,2.49345653471472,4.05603157669394,9.47106083807942,3.6078021476927,9.85618757891331,2.94618598241064,10.539755879979,10.8053989083732,10.9837899181263,11.1521565198429,15.0360663124435,11.914575986491,10.5882948752494,8.01980449290949,9.7005596819779,10.2117283290622,9.14945845652534,10.5213951565236,6.39508673218875,4.179025998266,3.2925141825271,10.3497818745616,2.1066395619397,1.02939162845886,1.13665399758237,4.55676699578104,6.56672967947069,5.22179978236943,5.91861838963026,5.50939848892731,5.707883176833,2.55787339225449,3.75582761959467,5.7215017759913,2.96207729844265,2.46251196118643,1.94565142910054,1.02339991197733,1.3173006917463,0.805238512562231,3.57492912559016,10.2904612379284,0.330418782983798,0.793351699990633,11.5175655289026,8.82499353069666,7.86091514064769,4.43703754171354,4.22518283305254,3.99473814836374,0.474529061544512,4.94096864172033,2.76468729680296,4.17808591286417,4.09424582950152,2.69645822596266,1.08069024937347,1.1948476395262,10.2420666514664,8.68288695833939,12.3978509240388,10.1825663922657,6.98228953803453,9.53847150508332,7.27220176928959,3.83786384746966,3.29697328466887,4.56569506510662,0,2.8363667971736,2.35870794135844,1.34917267430912,2.23146133527353,1.4470629585145,1.52775511068852,2.30156909960649,2.2698931748505,0.549122826376163,2.87536413054709,3.72140947668503,2.18426371180192,0.757736633841335,0.896987067609561,1.92977408545347,2.77129785249907,10.0430448238357,8.47417877498535,8.48725428875941,8.21415869009757,5.52770649557992,4.52282917683426,6.24427673144956,7.40885177299098,7.52979944805835,7.33491935824441,2.78567635016755,2.07221978239075,2.60368305446721,1.50791283939272,0,0.983528546038072,2.20749397043786,2.88991061978026,4.10240903072711,1.3114795630134,1.51482556322624,5.04813151066011,5.46614242015294,6.24727853425117,4.77937595905104,3.56477878531831,3.96307143104365,4.04810701674894,4.09158201075837,4.34816555741176,5.78378369559253,5.81954349353901,8.72521457969551,14.1711654637611,3.95928295134085,0,8.49732226542435,4.53485335447127,3.96070667487386,2.95301892880773,3.68922177532713,4.65170927702798,7.63420831902762,7.12994756769443,2.21225730555071,4.21674434299995,1.03135543248187,6.80879211507576,12.6042765821917,13.5826617971892,10.7168517515796,10.6404140185364,10.3453914209201,10.6956863391379,7.61162372786498,1.40803024838226,1.48282449604674,1.10264199027481,1.81374878235628,3.71368181400583,1.86970067277283,1.55184047204077,1.31312719796049,2.04036585640896,2.96680483216816,1.02522528478712,7.22354037871279,2.59272338317596,1.88368457004691,0.546776910884101,1.37266903923914,0.849892149969277,0.839708713941948,1.38199973804424,1.90934123603023,13.6024477239888,6.91286188231286,6.58832579012988,3.13632444021703,4.58561383866973,4.45052343069908,5.20716771069616,1.30877970992015,1.55537967950151,1.86401793926078,1.69107881605257,9.27002585472668,6.45288112782681,7.19469396872976,7.23295011475294,7.94093789806657,6.45464812551647,5.9894017028217,2.9360616439199,2.65742532908607,2.59227005632079,1.58005560314089,4.25722952109345,4.82741498674688,3.89762468933385,4.11761400035207,1.19208812868759,1.9231271923195,1.77227432609493,1.61546319917036,2.51482461961499,1.91569751759997,0.974578807397524,2.21287235772758,1.16876902181569,0.906921534460845,0.665957860122194,0.448569283047378,1.00730769818447,4.63655025677257,1.68914227906064,2.74727436400898,1.50057865355346,3.00943262421218,6.7770221114048,4.14292712856459,7.44764167471216,4.46818274093588,2.05524755931193,3.7769694869485,4.72515750162264,2.70192721934532,0.906284817968409,3.10656187051092,12.350694362517,9.97562183502578,12.2928196142977,5.10524105843418,6.91723436672342,4.59608771125035,5.55616819504038,4.32673620201678,3.20919209591815,4.80124702351215,5.0695859978048,3.77252682772152,4.12022632867483,4.54578582074572,4.25022470271538,3.81034953026459,6.2577536010222,3.47236596834669,5.35711671044299,3.38557516309114,3.77156177623957,3.72699192934609,4.5302876089991,3.77900683244054,4.98779716201252,4.99226186560891,4.57319932181931,6.05060336307039,4.34573164306758,6.73370725989286,5.10130577933949,5.31924204828043,4.91077251803627,3.87342102964915,4.24394544158511,7.24450676020043,3.04111090979031,6.87587372954555,2.86932498103265,3.08827986767322,4.17362104116759
|short_description=p3@Sephs1
}}

Latest revision as of 17:54, 26 September 2015

Short description:p3@Sephs1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sephs1_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: 0bp_to_ENSMUST00000115019, uc008ifc.1_5end
EntrezGene:Sephs1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sephs1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C314.36
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.07
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C610.54
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C910.98
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C615.04
eyeball, neonate N01.CNhs11140.1532-43E711.91
eyeball, neonate N02.CNhs11205.1551-44G810.59
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E29.15
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G110.29
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D87.86
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I910.24
kidney, embryo E15.CNhs10997.434-16F88.68
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G79.54
kidney, neonate N10.CNhs11206.758-6D57.27
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G210.04
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A37.53
lung, neonate N10.CNhs11219.750-23E67.33
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I75.82
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I414.17
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C713.58
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B910.64
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I24.83
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I812.35
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.96e-0833
neuronal stem cell1.96e-0833
neuroblast1.96e-0833
electrically signaling cell1.96e-0833
CNS neuron (sensu Vertebrata)1.22e-0723
neuroblast (sensu Vertebrata)1.22e-0723
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