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FFCP PHASE1:Mm9::chr7:4071200..4071211,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=57776
|EntrezGene=57776
|HGNC=
|HGNC=
|MCL_coexpression_id=612
|TSSclassifier=NA
|UniProt=D6RG66
|UniProt=D6RG66
|association_with_transcript=-12bp_to_ENSMUST00000153673_5end
|association_with_transcript=-12bp_to_ENSMUST00000153673_5end
|cluster_id=chr7:4071200..4071211,+
|description=CAGE_peak_3_at_Ttyh1_5end
|description=CAGE_peak_3_at_Ttyh1_5end
|id=chr7:4071200..4071211,+
|id=chr7:4071200..4071211,+
|ontology_enrichment_celltype=CL:0000221!2.01e-25!44;CL:0000133!2.01e-25!44;CL:0002319!9.86e-25!43;CL:0000055!1.94e-19!50;CL:0000540!1.20e-18!33;CL:0000047!1.20e-18!33;CL:0000031!1.20e-18!33;CL:0000404!1.20e-18!33;CL:0000117!1.81e-15!23;CL:0000337!1.81e-15!23;CL:0000393!2.15e-14!39;CL:0000211!2.15e-14!39;CL:0002321!8.34e-10!70;CL:0000220!8.34e-10!70;CL:0000333!6.95e-07!10;CL:0000095!6.95e-07!10;CL:0000243!6.95e-07!10;CL:0000123!6.95e-07!10;CL:0000125!6.95e-07!10;CL:0000030!6.95e-07!10;CL:0000339!6.95e-07!10
|ontology_enrichment_celltype=CL:0000221!2.01e-25!44;CL:0000133!2.01e-25!44;CL:0002319!9.86e-25!43;CL:0000055!1.94e-19!50;CL:0000540!1.20e-18!33;CL:0000047!1.20e-18!33;CL:0000031!1.20e-18!33;CL:0000404!1.20e-18!33;CL:0000117!1.81e-15!23;CL:0000337!1.81e-15!23;CL:0000393!2.15e-14!39;CL:0000211!2.15e-14!39;CL:0002321!8.34e-10!70;CL:0000220!8.34e-10!70;CL:0000333!6.95e-07!10;CL:0000095!6.95e-07!10;CL:0000243!6.95e-07!10;CL:0000123!6.95e-07!10;CL:0000125!6.95e-07!10;CL:0000030!6.95e-07!10;CL:0000339!6.95e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000221,1.78e-35,44;CL:0000133,1.78e-35,44;CL:0002319,2.20e-34,43;CL:0000540,3.45e-26,33;CL:0000047,3.45e-26,33;CL:0000031,3.45e-26,33;CL:0000404,3.45e-26,33;CL:0000117,3.45e-22,23;CL:0000337,3.45e-22,23;CL:0000393,1.00e-20,39;CL:0000211,1.00e-20,39;CL:0002321,8.36e-18,70;CL:0002453,2.23e-09,8;CL:0000333,1.13e-08,10;CL:0000095,1.13e-08,10;CL:0000243,1.13e-08,10;CL:0000123,1.13e-08,10;CL:0000125,1.13e-08,10;CL:0000030,1.13e-08,10;CL:0000339,1.13e-08,10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.49e-42!75;UBERON:0001016!2.49e-42!75;UBERON:0001017!1.76e-41!73;UBERON:0005743!1.76e-41!73;UBERON:0004121!3.59e-36!102;UBERON:0000924!3.59e-36!102;UBERON:0006601!3.59e-36!102;UBERON:0001049!4.93e-28!52;UBERON:0005068!4.93e-28!52;UBERON:0006241!4.93e-28!52;UBERON:0007135!4.93e-28!52;UBERON:0002346!8.32e-27!71;UBERON:0003075!8.32e-27!71;UBERON:0007284!8.32e-27!71;UBERON:0000955!1.47e-26!50;UBERON:0006238!1.47e-26!50;UBERON:0000033!1.80e-26!63;UBERON:0002616!1.00e-25!49;UBERON:0002020!4.20e-23!34;UBERON:0003056!1.77e-19!49;UBERON:0002791!3.69e-19!29;UBERON:0003528!3.69e-19!29;UBERON:0001893!3.69e-19!29;UBERON:0003080!5.58e-19!40;UBERON:0002780!2.57e-18!39;UBERON:0001890!2.57e-18!39;UBERON:0006240!2.57e-18!39;UBERON:0000956!1.01e-13!21;UBERON:0001869!1.01e-13!21;UBERON:0000203!1.01e-13!21;UBERON:0007811!1.04e-13!86;UBERON:0002619!8.88e-12!17;UBERON:0000153!3.29e-11!94;UBERON:0003076!1.11e-09!12;UBERON:0003057!1.11e-09!12;UBERON:0002021!1.18e-08!10;UBERON:0000411!1.18e-08!10;UBERON:0001950!1.18e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.25e-59,73;UBERON:0001016,5.67e-59,75;UBERON:0004121,3.23e-51,95;UBERON:0000924,3.23e-51,95;UBERON:0006601,3.23e-51,95;UBERON:0000073,4.85e-42,54;UBERON:0001049,3.64e-39,52;UBERON:0005068,3.64e-39,52;UBERON:0006241,3.64e-39,52;UBERON:0007135,3.64e-39,52;UBERON:0002346,9.19e-39,64;UBERON:0003075,9.19e-39,64;UBERON:0007284,9.19e-39,64;UBERON:0002020,1.80e-34,34;UBERON:0010371,7.85e-34,73;UBERON:0000955,8.36e-33,47;UBERON:0006238,8.36e-33,47;UBERON:0002616,1.54e-31,46;UBERON:0003528,3.87e-28,29;UBERON:0002791,3.87e-28,29;UBERON:0001893,3.87e-28,29;UBERON:0003080,5.06e-25,40;UBERON:0003056,3.77e-24,49;UBERON:0002780,5.43e-24,39;UBERON:0001890,5.43e-24,39;UBERON:0006240,5.43e-24,39;UBERON:0010314,1.01e-23,92;UBERON:0000956,2.06e-19,21;UBERON:0001869,2.06e-19,21;UBERON:0000203,2.06e-19,21;UBERON:0002619,2.96e-16,17;UBERON:0003076,1.17e-14,12;UBERON:0003057,1.17e-14,12;UBERON:0002021,5.24e-13,10;UBERON:0000411,5.24e-13,10;UBERON:0001950,5.24e-13,10;UBERON:0011216,8.35e-13,194;UBERON:0000025,1.08e-10,114;UBERON:0004111,6.19e-10,122;UBERON:0002420,9.15e-10,8;UBERON:0007245,9.15e-10,8;UBERON:0010009,9.15e-10,8;UBERON:0010011,9.15e-10,8;UBERON:0000454,9.15e-10,8;UBERON:0002240,1.46e-08,6;UBERON:0005174,1.46e-08,6;UBERON:0001137,1.46e-08,6;UBERON:0004733,1.26e-07,6;UBERON:0004732,1.26e-07,6;UBERON:0002028,1.26e-07,6;UBERON:0007277,1.26e-07,6;UBERON:0001948,2.15e-07,5;UBERON:0002315,2.15e-07,5
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,3.2703773457067,3.29529274101708,4.47188767870852,4.33957907038624,5.75010257459886,0,0,0,0,0.286533439938757,0,3.64169629547276,4.7609188134483,3.80298842103708,0,0,0,0,0,15.579205746957,18.8266969607562,2.17748185847803,1.35005938331691,2.73422449756797,14.568200204594,13.0312439161452,1.71487118900936,1.72521847832825,0.919218786610021,13.2139057199266,10.7257363991558,10.1380311949121,4.3522474950964,3.56801810049398,5.2091337055676,14.5175159480718,9.56696437053856,12.5294563176984,8.83885756421003,8.96941589034349,5.40558392893372,1.13589289999776,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,5.49289337129054,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.144599356919912,0,0,0,0.484875253135222,0,7.31951992528868,10.4723353406728,0,0,0,0,7.04016005202667,8.6925114535539,3.01570445070875,8.16974304903699,9.46147192122223,10.389402227978,9.89671704713322,0,0,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0.30140963567143,1.97305847538851,2.17793324484245,3.18585863503078,1.55222022443409,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,2.16099685996497,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,10.4318401067061,0,0,1.89304931649754,0,2.15423397732799,4.30143836314594,4.01037613348309,3.67999490025482,1.61924280669958,1.75353514746787,1.97643888973262,9.96096080907602,0,0,0,0,0,0.242780636154981,0.604647113929502,0.943025398779491,0.590603785761546,0.614870295887855,0.258428293168221,0,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0.388076051348264,0,0,0.178368817602071,0.493647061806363,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0.656563598980245,0.291480836629851,9.82754100655701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0.247960367176008,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0,0.352071715937262,0.911430693907651,1.78260885523708,0.483168241652012,0.576060012515731,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,8.28585425712918,14.3223878359849,18.0445841460872,12.3314853558716,12.0863023582352,7.42524750254986,4.05289082901798,9.06284817968409,8.80192529978094,0.103787347584177,1.19707462020309,0.853668028770671,0.729320151204882,0,0.735374033800057,0.222246727801615,0.412070114477788,0.320919209591815,1.76888048234658,0.50695859978048,0.188626341386076,0.280924522409647,0.512201219238954,0.746661096422973,1.90517476513229,0.347652977834566,0.38581844092741,1.23625770240992,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,0.561142271657738,0.711810108745045,0.394017929502254,0,0.77468420592983,0,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,0.220591419119515,0.695603506861264
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,3.2703773457067,3.29529274101708,4.47188767870852,4.33957907038624,5.75010257459886,0,0,0,0,0.286533439938757,0,3.64169629547276,4.7609188134483,3.80298842103708,0,0,0,0,0,15.579205746957,18.8266969607562,2.17748185847803,1.35005938331691,2.73422449756797,14.568200204594,13.0312439161452,1.71487118900936,1.72521847832825,0.919218786610021,13.2139057199266,10.7257363991558,10.1380311949121,4.3522474950964,3.56801810049398,5.2091337055676,14.5175159480718,9.56696437053856,12.5294563176984,8.83885756421003,8.96941589034349,5.40558392893372,1.13589289999776,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,5.49289337129054,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.144599356919912,0,0,0,0.484875253135222,0,7.31951992528868,10.4723353406728,0,0,0,0,7.04016005202667,8.6925114535539,3.01570445070875,8.16974304903699,9.46147192122223,10.389402227978,9.89671704713322,0,0,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0.30140963567143,1.97305847538851,2.17793324484245,3.18585863503078,1.55222022443409,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,2.16099685996497,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,10.4318401067061,0,0,1.89304931649754,0,2.15423397732799,4.30143836314594,4.01037613348309,3.67999490025482,1.61924280669958,1.75353514746787,1.97643888973262,9.96096080907602,0,0,0,0,0,0.242780636154981,0.604647113929502,0.943025398779491,0.590603785761546,0.614870295887855,0.258428293168221,0,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0.388076051348264,0,0,0.178368817602071,0.493647061806363,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0.656563598980245,0.291480836629851,9.82754100655701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0.247960367176008,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0,0.352071715937262,0.911430693907651,1.78260885523708,0.483168241652012,0.576060012515731,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,8.28585425712918,14.3223878359849,18.0445841460872,12.3314853558716,12.0863023582352,7.42524750254986,4.05289082901798,9.06284817968409,8.80192529978094,0.103787347584177,1.19707462020309,0.853668028770671,0.729320151204882,0,0.735374033800057,0.222246727801615,0.412070114477788,0.320919209591815,1.76888048234658,0.50695859978048,0.188626341386076,0.280924522409647,0.512201219238954,0.746661096422973,1.90517476513229,0.347652977834566,0.38581844092741,1.23625770240992,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,0.561142271657738,0.711810108745045,0.394017929502254,0,0.77468420592983,0,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,0.220591419119515,0.695603506861264
|short_description=p3@Ttyh1
|short_description=p3@Ttyh1
}}
}}

Latest revision as of 17:23, 26 September 2015

Short description:p3@Ttyh1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ttyh1_5end
Coexpression cluster:MCL_coexpression_mm9:612
Association with transcript: -12bp_to_ENSMUST00000153673_5end
EntrezGene:Ttyh1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ttyh1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C815.58
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B29.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.25e-5973
nervous system5.67e-5975
ectoderm-derived structure3.23e-5195
ectoderm3.23e-5195
presumptive ectoderm3.23e-5195
regional part of nervous system4.85e-4254
neural tube3.64e-3952
neural rod3.64e-3952
future spinal cord3.64e-3952
neural keel3.64e-3952
neurectoderm9.19e-3964
neural plate9.19e-3964
presumptive neural plate9.19e-3964
gray matter1.80e-3434
ecto-epithelium7.85e-3473
brain8.36e-3347
future brain8.36e-3347
regional part of brain1.54e-3146
brain grey matter3.87e-2829
regional part of telencephalon3.87e-2829
telencephalon3.87e-2829
anterior neural tube5.06e-2540
pre-chordal neural plate3.77e-2449
regional part of forebrain5.43e-2439
forebrain5.43e-2439
future forebrain5.43e-2439
structure with developmental contribution from neural crest1.01e-2392
cerebral cortex2.06e-1921
cerebral hemisphere2.06e-1921
pallium2.06e-1921
regional part of cerebral cortex2.96e-1617
posterior neural tube1.17e-1412
chordal neural plate1.17e-1412
occipital lobe5.24e-1310
visual cortex5.24e-1310
neocortex5.24e-1310
organ system subdivision8.35e-13194
tube1.08e-10114
anatomical conduit6.19e-10122
basal ganglion9.15e-108
nuclear complex of neuraxis9.15e-108
aggregate regional part of brain9.15e-108
collection of basal ganglia9.15e-108
cerebral subcortex9.15e-108
spinal cord1.46e-086
dorsal region element1.46e-086
dorsum1.46e-086
segmental subdivision of hindbrain1.26e-076
segmental subdivision of nervous system1.26e-076
hindbrain1.26e-076
presumptive hindbrain1.26e-076
regional part of spinal cord2.15e-075
gray matter of spinal cord2.15e-075
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