FFCP PHASE1:Mm9::chr7:36370571..36370586,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243923 | |EntrezGene=243923 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q148R9 | |UniProt=Q148R9 | ||
|association_with_transcript=14bp_to_ENSMUST00000069912,NM_145840,uc009gkb.1_5end | |association_with_transcript=14bp_to_ENSMUST00000069912,NM_145840,uc009gkb.1_5end | ||
|cluster_id=chr7:36370571..36370586,- | |||
|description=CAGE_peak_2_at_Rgs9bp_5end | |description=CAGE_peak_2_at_Rgs9bp_5end | ||
|id=chr7:36370571..36370586,- | |id=chr7:36370571..36370586,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.59e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!7.05e-08!9;UBERON:0000019!7.05e-08!9;UBERON:0000047!7.05e-08!9;UBERON:0004088!7.05e-08!9;UBERON:0002104!7.05e-08!9;UBERON:0001456!7.05e-08!9;UBERON:0003072!7.05e-08!9;UBERON:0003071!7.05e-08!9;UBERON:0004128!7.05e-08!9;UBERON:0001444!1.37e-07!11;UBERON:0000020!9.50e-07!12;UBERON:0001032!9.50e-07!12;UBERON:0004456!9.50e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.40e-22,9;UBERON:0000019,1.40e-22,9;UBERON:0000047,1.40e-22,9;UBERON:0010312,1.40e-22,9;UBERON:0004088,1.40e-22,9;UBERON:0002104,1.40e-22,9;UBERON:0001456,1.40e-22,9;UBERON:0003072,1.40e-22,9;UBERON:0004128,1.40e-22,9;UBERON:0003071,1.40e-22,9;UBERON:0001444,1.15e-18,11;UBERON:0000020,3.40e-17,12;UBERON:0001032,3.40e-17,12;UBERON:0004456,3.40e-17,12;UBERON:0000033,5.98e-16,13;UBERON:0005085,5.98e-16,13;UBERON:0007811,1.67e-10,36;UBERON:0000153,6.31e-09,43 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681721290312231,0,0,0,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5710925974421,0.390361328888111,0,0.180062129805349,0.150704817835715,0.272145996605311,0.768682321709099,1.21812241927647,34.4075483082891,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.316182685621286,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.819674726883377,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.328281799490123,0,0,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681721290312231,0,0,0,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5710925974421,0.390361328888111,0,0.180062129805349,0.150704817835715,0.272145996605311,0.768682321709099,1.21812241927647,34.4075483082891,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.316182685621286,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.819674726883377,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.328281799490123,0,0,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p2@Rgs9bp | |short_description=p2@Rgs9bp | ||
}} | }} |
Latest revision as of 16:52, 26 September 2015
Short description: | p2@Rgs9bp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rgs9bp_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 14bp_to_ENSMUST00000069912, NM_145840, uc009gkb.1_5end |
EntrezGene: | Rgs9bp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.40e-22 | 9 |
camera-type eye | 1.40e-22 | 9 |
simple eye | 1.40e-22 | 9 |
immature eye | 1.40e-22 | 9 |
ocular region | 1.40e-22 | 9 |
visual system | 1.40e-22 | 9 |
face | 1.40e-22 | 9 |
optic cup | 1.40e-22 | 9 |
optic vesicle | 1.40e-22 | 9 |
eye primordium | 1.40e-22 | 9 |
subdivision of head | 1.15e-18 | 11 |
sense organ | 3.40e-17 | 12 |
sensory system | 3.40e-17 | 12 |
entire sense organ system | 3.40e-17 | 12 |
head | 5.98e-16 | 13 |
ectodermal placode | 5.98e-16 | 13 |
craniocervical region | 1.67e-10 | 36 |
anterior region of body | 6.31e-09 | 43 |